RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 GPRC5AQ8NFJ5 357 aa9.67□□□□□ -0.86
SMARCE1-217ENST00000580654 KLHDC4Q8TBB5 520 aa9.67□□□□□ -0.86
SMARCE1-217ENST00000580654 RNPC3Q96LT9 517 aaKnown RBP9.67□□□□□ -0.86
SMARCE1-217ENST00000580654 TBC1D12O60347 775 aa9.66□□□□□ -0.86
SMARCE1-217ENST00000580654 MAPK4P31152 587 aa9.66□□□□□ -0.86
SMARCE1-217ENST00000580654 HOXA7P31268 230 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-217ENST00000580654 HERVK_113P62684 666 aa9.66□□□□□ -0.86
SMARCE1-217ENST00000580654 ERVK-9P63128 1117 aa9.66□□□□□ -0.86
SMARCE1-217ENST00000580654 ERVK-24P63145 666 aa9.66□□□□□ -0.86
SMARCE1-217ENST00000580654 ADGRE1Q14246 886 aa9.66□□□□□ -0.86
SMARCE1-217ENST00000580654 PLEKHH3Q7Z736 793 aa9.66□□□□□ -0.86
SMARCE1-217ENST00000580654 OSBPL5Q9H0X9 879 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-217ENST00000580654 EPHX3Q9H6B9 360 aa9.66□□□□□ -0.86
SMARCE1-217ENST00000580654 XIRP2A4UGR9 3374 aa9.66□□□□□ -0.86
SMARCE1-217ENST00000580654 GBF1Q92538 1859 aa9.66□□□□□ -0.86
SMARCE1-217ENST00000580654 UTYO14607 1347 aa9.65□□□□□ -0.86
SMARCE1-217ENST00000580654 CHD9Q3L8U1 2897 aa9.65□□□□□ -0.86
SMARCE1-217ENST00000580654 LDHBP07195 334 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-217ENST00000580654 NBPF7P0C2Y1 421 aaPredicted RBP9.65□□□□□ -0.86
SMARCE1-217ENST00000580654 BMP1P13497 986 aa9.65□□□□□ -0.86
SMARCE1-217ENST00000580654 MAP2K5Q13163 448 aa9.65□□□□□ -0.86
SMARCE1-217ENST00000580654 PICALMQ13492 652 aa9.65□□□□□ -0.86
SMARCE1-217ENST00000580654 CCDC85BQ15834 202 aaPredicted RBP9.65□□□□□ -0.86
SMARCE1-217ENST00000580654 RABL6Q3YEC7 729 aaPredicted RBP9.65□□□□□ -0.86
SMARCE1-217ENST00000580654 ALYREFQ86V81 257 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-217ENST00000580654 ANKRD44Q8N8A2 993 aa9.65□□□□□ -0.86
SMARCE1-217ENST00000580654 SPOCK2Q92563 424 aa9.65□□□□□ -0.86
SMARCE1-217ENST00000580654 TIFAQ96CG3 184 aa9.65□□□□□ -0.86
SMARCE1-217ENST00000580654 PRDM12Q9H4Q4 367 aa9.65□□□□□ -0.86
SMARCE1-217ENST00000580654 SALL1Q9NSC2 1324 aa9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 USP17L5A8MUK1 530 aa9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 MSCO60682 206 aa9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 CNMDO75829 334 aa9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 IFIT1P09914 478 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 CYBAP13498 195 aa9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 CNGA1P29973 690 aa9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 ZEB1P37275 1124 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 CAP2P40123 477 aa9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 IRX3P78415 501 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 JAG1P78504 1218 aa9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 MTMR2Q13614 643 aa9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 PUM3Q15397 648 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 C1orf53Q5VUE5 145 aa9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 NPLOC4Q8TAT6 608 aa9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 EDC3Q96F86 508 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 TBC1D2Q9BYX2 928 aa9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 BICC1Q9H694 974 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.64□□□□□ -0.872e-6■■■■■ 27.2
SMARCE1-217ENST00000580654 C11orf16Q9NQ32 467 aa9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 C9orf78Q9NZ63 289 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 NDUFB9Q9Y6M9 179 aa9.64□□□□□ -0.87
SMARCE1-217ENST00000580654 GRXCR1A8MXD5 290 aa9.63□□□□□ -0.87
SMARCE1-217ENST00000580654 VAMP4O75379 141 aa9.63□□□□□ -0.87
SMARCE1-217ENST00000580654 CYP2C19P33261 490 aa9.63□□□□□ -0.87
SMARCE1-217ENST00000580654 RHBDL3P58872 404 aa9.63□□□□□ -0.87
SMARCE1-217ENST00000580654 TLE2Q04725 743 aa9.63□□□□□ -0.87
SMARCE1-217ENST00000580654 MFSD14CQ5VZR4 134 aa9.63□□□□□ -0.87
SMARCE1-217ENST00000580654 ANO1Q5XXA6 986 aa9.63□□□□□ -0.87
SMARCE1-217ENST00000580654 GAS2L1Q99501 681 aaPredicted RBP9.63□□□□□ -0.87
SMARCE1-217ENST00000580654 PAGR1Q9BTK6 254 aa9.63□□□□□ -0.87
SMARCE1-217ENST00000580654 WDR18Q9BV38 432 aa9.63□□□□□ -0.87
SMARCE1-217ENST00000580654 PBX4Q9BYU1 374 aa9.63□□□□□ -0.87
SMARCE1-217ENST00000580654 ZNF236Q9UL36 1845 aa9.62□□□□□ -0.87
SMARCE1-217ENST00000580654 KIAA0355O15063 1070 aa9.62□□□□□ -0.87
SMARCE1-217ENST00000580654 ALDH1L1O75891 902 aa9.62□□□□□ -0.87
SMARCE1-217ENST00000580654 HOXC6P09630 235 aa9.62□□□□□ -0.87
SMARCE1-217ENST00000580654 PTPREP23469 700 aa9.62□□□□□ -0.87
SMARCE1-217ENST00000580654 ADCYAP1R1P41586 468 aa9.62□□□□□ -0.87
SMARCE1-217ENST00000580654 BTDP43251 543 aa9.62□□□□□ -0.87
SMARCE1-217ENST00000580654 BACE1P56817 501 aa9.62□□□□□ -0.87
SMARCE1-217ENST00000580654 TFF2Q03403 129 aa9.62□□□□□ -0.87
SMARCE1-217ENST00000580654 SHROOM1Q2M3G4 852 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-217ENST00000580654 ARRDC4Q8NCT1 418 aa9.62□□□□□ -0.87
SMARCE1-217ENST00000580654 LPIN2Q92539 896 aa9.62□□□□□ -0.87
SMARCE1-217ENST00000580654 FERMT2Q96AC1 680 aa9.62□□□□□ -0.87
SMARCE1-217ENST00000580654 CXXC1Q9P0U4 656 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-217ENST00000580654 MYO9BQ13459 2157 aa9.62□□□□□ -0.87
SMARCE1-217ENST00000580654 SLC15A5A6NIM6 579 aa9.61□□□□□ -0.87
SMARCE1-217ENST00000580654 KBTBD13C9JR72 458 aa9.61□□□□□ -0.87
SMARCE1-217ENST00000580654 CLTBP09497 229 aa9.61□□□□□ -0.87
SMARCE1-217ENST00000580654 SLC5A1P13866 664 aa9.61□□□□□ -0.87
SMARCE1-217ENST00000580654 KCNQ1P51787 676 aa9.61□□□□□ -0.87
SMARCE1-217ENST00000580654 FPGSQ05932 587 aa9.61□□□□□ -0.87
SMARCE1-217ENST00000580654 LRRC41Q15345 812 aa9.61□□□□□ -0.87
SMARCE1-217ENST00000580654 IL27Q8NEV9 243 aa9.61□□□□□ -0.87
SMARCE1-217ENST00000580654 ZNF384Q8TF68 577 aa9.61□□□□□ -0.87
SMARCE1-217ENST00000580654 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.61□□□□□ -0.873e-7■■■□□ 15.4
SMARCE1-217ENST00000580654 AS3MTQ9HBK9 375 aa9.61□□□□□ -0.87
SMARCE1-217ENST00000580654 TACC3Q9Y6A5 838 aa9.61□□□□□ -0.87
SMARCE1-217ENST00000580654 LRRC37A2A6NM11 1700 aa9.61□□□□□ -0.87
SMARCE1-217ENST00000580654 CHD7Q9P2D1 2997 aa9.61□□□□□ -0.87
SMARCE1-217ENST00000580654 CDK5RAP2Q96SN8 1893 aa9.61□□□□□ -0.87
SMARCE1-217ENST00000580654 SMCHD1A6NHR9 2005 aa9.61□□□□□ -0.87
SMARCE1-217ENST00000580654 MROH7-TTC4A0A0A0MT08 1334 aa9.6□□□□□ -0.87
SMARCE1-217ENST00000580654 GPR75-ASB3A0A0A6YYF3 556 aa9.6□□□□□ -0.87
SMARCE1-217ENST00000580654 PHKA1P46020 1223 aa9.6□□□□□ -0.87
SMARCE1-217ENST00000580654 RFX5P48382 616 aaPredicted RBP9.6□□□□□ -0.87
SMARCE1-217ENST00000580654 ATP2B2Q01814 1243 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms