RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 TSPY3P0CV98 308 aa14.76□□□□□ -0.05
CDK5RAP3-217ENST00000580287 TSPY8P0CW00 308 aa14.76□□□□□ -0.05
CDK5RAP3-217ENST00000580287 RCSD1Q6JBY9 416 aa14.76□□□□□ -0.05
CDK5RAP3-217ENST00000580287 RASGRP2Q7LDG7 609 aa14.76□□□□□ -0.05
CDK5RAP3-217ENST00000580287 SAMD7Q7Z3H4 446 aa14.76□□□□□ -0.05
CDK5RAP3-217ENST00000580287 AIFM3Q96NN9 605 aa14.76□□□□□ -0.05
CDK5RAP3-217ENST00000580287 TIAM2Q8IVF5 1701 aa14.76□□□□□ -0.05
CDK5RAP3-217ENST00000580287 GOLGA8AA7E2F4 631 aa14.75□□□□□ -0.05
CDK5RAP3-217ENST00000580287 H3BQV1 296 aa14.75□□□□□ -0.05
CDK5RAP3-217ENST00000580287 CPLX1O14810 134 aa14.75□□□□□ -0.05
CDK5RAP3-217ENST00000580287 EIF6P56537 245 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP3-217ENST00000580287 IFFO2Q5TF58 517 aa14.75□□□□□ -0.05
CDK5RAP3-217ENST00000580287 ZNF654Q8IZM8 581 aa14.75□□□□□ -0.05
CDK5RAP3-217ENST00000580287 STX8Q9UNK0 236 aa14.75□□□□□ -0.05
CDK5RAP3-217ENST00000580287 ASTN2O75129 1339 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP3-217ENST00000580287 GMPSP49915 693 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP3-217ENST00000580287 UBE2HP62256 183 aa14.75□□□□□ -0.05
CDK5RAP3-217ENST00000580287 CSPP1Q1MSJ5 1256 aa14.75□□□□□ -0.05
CDK5RAP3-217ENST00000580287 ZSCAN30Q86W11 494 aa14.75□□□□□ -0.05
CDK5RAP3-217ENST00000580287 SMARCC2Q8TAQ2 1214 aa14.75□□□□□ -0.05
CDK5RAP3-217ENST00000580287 DNAJC18Q9H819 358 aa14.75□□□□□ -0.05
CDK5RAP3-217ENST00000580287 HDAC9Q9UKV0 1011 aa14.75□□□□□ -0.05
CDK5RAP3-217ENST00000580287 FER1L6Q2WGJ9 1857 aa14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 hCG_1642624A0A1W2PR95 340 aa14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 FZD9O00144 591 aa14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 WNT10BO00744 389 aa14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 GABPAQ06546 454 aa14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 PAXIP1Q6ZW49 1069 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 TTC6Q86TZ1 520 aa14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 SERPINB13Q9UIV8 391 aa14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 MYO3BQ8WXR4 1341 aa14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 ZNF646O15015 1829 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 AKR1B1P15121 316 aa14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 KRT85P78386 507 aa14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 TBC1D10BQ4KMP7 808 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 TMEM87AQ8NBN3 555 aa14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 AGBL3Q8NEM8 1001 aa14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 IDI2Q9BXS1 227 aa14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 ZNF70Q9UC06 446 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP3-217ENST00000580287 ROBO3Q96MS0 1386 aa14.73□□□□□ -0.05
CDK5RAP3-217ENST00000580287 SYNE3Q6ZMZ3 975 aa14.73□□□□□ -0.05
CDK5RAP3-217ENST00000580287 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.73□□□□□ -0.05
CDK5RAP3-217ENST00000580287 MYOZ2Q9NPC6 264 aa14.73□□□□□ -0.05
CDK5RAP3-217ENST00000580287 TFIP11Q9UBB9 837 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP3-217ENST00000580287 LTBP3Q9NS15 1303 aa14.73□□□□□ -0.05
CDK5RAP3-217ENST00000580287 PCP11498 1178 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP3-217ENST00000580287 TNIP1Q15025 636 aa14.73□□□□□ -0.05
CDK5RAP3-217ENST00000580287 NTRK3Q16288 839 aa14.73□□□□□ -0.05
CDK5RAP3-217ENST00000580287 MICALL2Q8IY33 904 aa14.73□□□□□ -0.05
CDK5RAP3-217ENST00000580287 FANCBQ8NB91 859 aa14.73□□□□□ -0.05
CDK5RAP3-217ENST00000580287 TMEM39BQ9GZU3 492 aa14.73□□□□□ -0.05
CDK5RAP3-217ENST00000580287 TSPY26PQ9H489 355 aa14.73□□□□□ -0.05
CDK5RAP3-217ENST00000580287 ORC3Q9UBD5 711 aaPredicted RBP14.73□□□□□ -0.05
CDK5RAP3-217ENST00000580287 SHMT1P34896 483 aa14.72□□□□□ -0.05
CDK5RAP3-217ENST00000580287 TROAPQ12815 778 aa14.72□□□□□ -0.05
CDK5RAP3-217ENST00000580287 PIBF1Q8WXW3 757 aa14.72□□□□□ -0.05
CDK5RAP3-217ENST00000580287 CEP95Q96GE4 821 aa14.72□□□□□ -0.05
CDK5RAP3-217ENST00000580287 CNOT7Q9UIV1 285 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-217ENST00000580287 CDK5RAP2Q96SN8 1893 aa14.72□□□□□ -0.05
CDK5RAP3-217ENST00000580287 OFD1O75665 1012 aa14.72□□□□□ -0.05
CDK5RAP3-217ENST00000580287 GUCY1A2P33402 732 aa14.72□□□□□ -0.05
CDK5RAP3-217ENST00000580287 CRACR2BQ8N4Y2 399 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP3-217ENST00000580287 PDLIM2Q96JY6 352 aa14.72□□□□□ -0.05
CDK5RAP3-217ENST00000580287 LLPHQ9BRT6 129 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-217ENST00000580287 MPHOSPH10O00566 681 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP3-217ENST00000580287 PLEKHA8P1O95397 391 aa14.71□□□□□ -0.05
CDK5RAP3-217ENST00000580287 MSNP26038 577 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP3-217ENST00000580287 RTN1Q16799 776 aa14.71□□□□□ -0.05
CDK5RAP3-217ENST00000580287 CCDC183Q5T5S1 534 aa14.71□□□□□ -0.05
CDK5RAP3-217ENST00000580287 TMTC2Q8N394 836 aa14.71□□□□□ -0.05
CDK5RAP3-217ENST00000580287 ZNF830Q96NB3 372 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-217ENST00000580287 PDCL3Q9H2J4 239 aa14.71□□□□□ -0.05
CDK5RAP3-217ENST00000580287 NAV1Q8NEY1 1877 aa14.71□□□□□ -0.05
CDK5RAP3-217ENST00000580287 HLA-DOAP06340 250 aa14.71□□□□□ -0.06
CDK5RAP3-217ENST00000580287 LMNB1P20700 586 aa14.71□□□□□ -0.06
CDK5RAP3-217ENST00000580287 MIGA2Q7L4E1 593 aa14.71□□□□□ -0.06
CDK5RAP3-217ENST00000580287 CATIPQ7Z7H3 387 aa14.71□□□□□ -0.06
CDK5RAP3-217ENST00000580287 CSRNP1Q96S65 589 aa14.71□□□□□ -0.06
CDK5RAP3-217ENST00000580287 SLC26A6Q9BXS9 759 aa14.71□□□□□ -0.06
CDK5RAP3-217ENST00000580287 GOLGA6L4A6NEF3 574 aa14.7□□□□□ -0.06
CDK5RAP3-217ENST00000580287 TMEM47Q9BQJ4 181 aa14.7□□□□□ -0.06
CDK5RAP3-217ENST00000580287 CPVLQ9H3G5 476 aa14.7□□□□□ -0.06
CDK5RAP3-217ENST00000580287 PI4KBQ9UBF8 816 aa14.7□□□□□ -0.06
CDK5RAP3-217ENST00000580287 USP25Q9UHP3 1055 aa14.7□□□□□ -0.06
CDK5RAP3-217ENST00000580287 DHX16O60231 1041 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP3-217ENST00000580287 DDNO94850 711 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-217ENST00000580287 GDF11O95390 407 aa14.7□□□□□ -0.06
CDK5RAP3-217ENST00000580287 JAG1P78504 1218 aa14.7□□□□□ -0.06
CDK5RAP3-217ENST00000580287 RRP1BQ14684 758 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP3-217ENST00000580287 SPDYE2Q495Y8 402 aa14.7□□□□□ -0.06
CDK5RAP3-217ENST00000580287 NBPF11Q86T75 865 aa14.7□□□□□ -0.06
CDK5RAP3-217ENST00000580287 SPATA32Q96LK8 384 aa14.7□□□□□ -0.06
CDK5RAP3-217ENST00000580287 RNF181Q9P0P0 153 aa14.7□□□□□ -0.06
CDK5RAP3-217ENST00000580287 DDX60LQ5H9U9 1706 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-217ENST00000580287 GOLGA8HP0CJ92 632 aa14.69□□□□□ -0.06
CDK5RAP3-217ENST00000580287 ATP2B2Q01814 1243 aa14.69□□□□□ -0.06
CDK5RAP3-217ENST00000580287 CEBPZQ03701 1054 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-217ENST00000580287 STAG2Q8N3U4 1231 aa14.69□□□□□ -0.06
CDK5RAP3-217ENST00000580287 PNMA1Q8ND90 353 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms