RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-208ENST00000579466 MYCNP04198 464 aaPredicted RBP11.74□□□□□ -0.53
MSI2-208ENST00000579466 COL6A1P12109 1028 aa11.74□□□□□ -0.53
MSI2-208ENST00000579466 ZKSCAN2Q63HK3 967 aa11.74□□□□□ -0.53
MSI2-208ENST00000579466 LHX8Q68G74 356 aa11.74□□□□□ -0.53
MSI2-208ENST00000579466 METTL16Q86W50 562 aaKnown RBP11.74□□□□□ -0.53
MSI2-208ENST00000579466 ITPRIPQ8IWB1 547 aa11.74□□□□□ -0.53
MSI2-208ENST00000579466 TRMT44Q8IYL2 757 aaKnown RBP11.74□□□□□ -0.53
MSI2-208ENST00000579466 ACER1Q8TDN7 264 aa11.74□□□□□ -0.53
MSI2-208ENST00000579466 USP6NLQ92738 828 aa11.74□□□□□ -0.53
MSI2-208ENST00000579466 SENP6Q9GZR1 1112 aaPredicted RBP11.74□□□□□ -0.53
MSI2-208ENST00000579466 ANTXR1Q9H6X2 564 aa11.74□□□□□ -0.53
MSI2-208ENST00000579466 GPR108Q9NPR9 543 aa11.74□□□□□ -0.53
MSI2-208ENST00000579466 USP17L15C9J2P7 530 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 USP17L13C9JLJ4 530 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 USP17L11C9JVI0 530 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 USP17L18D6R9N7 530 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 USP17L22D6RA61 530 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 USP17L17D6RBQ6 530 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 USP17L19D6RCP7 530 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 USP17L20D6RJB6 530 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 VCAM1P19320 739 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 CYP2C19P33261 490 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 CCNA1P78396 465 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 ATP8B2P98198 1209 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 USP17L24Q0WX57 530 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 ABCB5Q2M3G0 1257 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 LRIT3Q3SXY7 679 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 MFSD14CQ5VZR4 134 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 ANO1Q5XXA6 986 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 FTSJ3Q8IY81 847 aaKnown RBP11.73□□□□□ -0.53
MSI2-208ENST00000579466 SSH3Q8TE77 659 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 GTF3C2Q8WUA4 911 aaPredicted RBP11.73□□□□□ -0.53
MSI2-208ENST00000579466 EAF2Q96CJ1 260 aaPredicted RBP11.73□□□□□ -0.53
MSI2-208ENST00000579466 EDC3Q96F86 508 aaKnown RBP11.73□□□□□ -0.53
MSI2-208ENST00000579466 FAM161BQ96MY7 647 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 GINM1Q9NU53 330 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 BTBD7Q9P203 1132 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 SERPINB13Q9UIV8 391 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 IVNS1ABPQ9Y6Y0 642 aa11.73□□□□□ -0.53
MSI2-208ENST00000579466 LTBP2Q14767 1821 aa11.72□□□□□ -0.53
MSI2-208ENST00000579466 MPHOSPH10O00566 681 aaKnown RBP11.72□□□□□ -0.53
MSI2-208ENST00000579466 GLRX3O76003 335 aaKnown RBP11.72□□□□□ -0.53
MSI2-208ENST00000579466 ATP2B2Q01814 1243 aa11.72□□□□□ -0.53
MSI2-208ENST00000579466 EVX2Q03828 476 aa11.72□□□□□ -0.53
MSI2-208ENST00000579466 CERKLQ49MI3 558 aaPredicted RBP11.72□□□□□ -0.53
MSI2-208ENST00000579466 SAMD1Q6SPF0 538 aaPredicted RBP11.72□□□□□ -0.53
MSI2-208ENST00000579466 CATSPERGQ6ZRH7 1159 aa11.72□□□□□ -0.53
MSI2-208ENST00000579466 RPAP3Q9H6T3 665 aaPredicted RBP11.72□□□□□ -0.53
MSI2-208ENST00000579466 CABP5Q9NP86 173 aa11.72□□□□□ -0.53
MSI2-208ENST00000579466 MTMR10Q9NXD2 777 aa11.72□□□□□ -0.53
MSI2-208ENST00000579466 DDX20Q9UHI6 824 aaKnown RBP11.72□□□□□ -0.53
MSI2-208ENST00000579466 RABGAP1Q9Y3P9 1069 aa11.72□□□□□ -0.53
MSI2-208ENST00000579466 SPDYE16A6NNV3 312 aaPredicted RBP11.71□□□□□ -0.53
MSI2-208ENST00000579466 POLR3DP05423 398 aaPredicted RBP11.71□□□□□ -0.53
MSI2-208ENST00000579466 PTPREP23469 700 aa11.71□□□□□ -0.53
MSI2-208ENST00000579466 SHMT1P34896 483 aa11.71□□□□□ -0.53
MSI2-208ENST00000579466 PLCD1P51178 756 aa11.71□□□□□ -0.53
MSI2-208ENST00000579466 USP14P54578 494 aa11.71□□□□□ -0.53
MSI2-208ENST00000579466 SEPT2Q15019 361 aa11.71□□□□□ -0.53
MSI2-208ENST00000579466 TATDN1Q6P1N9 297 aa11.71□□□□□ -0.53
MSI2-208ENST00000579466 TTC6Q86TZ1 520 aa11.71□□□□□ -0.53
MSI2-208ENST00000579466 AACSQ86V21 672 aa11.71□□□□□ -0.53
MSI2-208ENST00000579466 NPLOC4Q8TAT6 608 aa11.71□□□□□ -0.53
MSI2-208ENST00000579466 ZNF512BQ96KM6 892 aaPredicted RBP11.71□□□□□ -0.53
MSI2-208ENST00000579466 C12orf42Q96LP6 360 aa11.71□□□□□ -0.53
MSI2-208ENST00000579466 LBHD1Q9BQE6 289 aaPredicted RBP11.71□□□□□ -0.53
MSI2-208ENST00000579466 TANGO6Q9C0B7 1094 aa11.71□□□□□ -0.53
MSI2-208ENST00000579466 KIAA1683Q9H0B3 1180 aa11.71□□□□□ -0.53
MSI2-208ENST00000579466 EXOC6BQ9Y2D4 811 aa11.71□□□□□ -0.53
MSI2-208ENST00000579466 ATP11BQ9Y2G3 1177 aa11.71□□□□□ -0.53
MSI2-208ENST00000579466 STXBP5LQ9Y2K9 1186 aa11.71□□□□□ -0.53
MSI2-208ENST00000579466 RLFQ13129 1914 aa11.7□□□□□ -0.54
MSI2-208ENST00000579466 BAZ2AQ9UIF9 1905 aaKnown RBP11.7□□□□□ -0.54
MSI2-208ENST00000579466 A0A0G2JMZ2 1700 aa11.7□□□□□ -0.54
MSI2-208ENST00000579466 SLC15A5A6NIM6 579 aa11.7□□□□□ -0.54
MSI2-208ENST00000579466 APBB1O00213 710 aa11.7□□□□□ -0.54
MSI2-208ENST00000579466 MAP3K12Q12852 859 aa11.7□□□□□ -0.54
MSI2-208ENST00000579466 GJC2Q5T442 439 aaPredicted RBP11.7□□□□□ -0.54
MSI2-208ENST00000579466 GPR153Q6NV75 609 aa11.7□□□□□ -0.54
MSI2-208ENST00000579466 CLEC10AQ8IUN9 316 aa11.7□□□□□ -0.54
MSI2-208ENST00000579466 TRPV1Q8NER1 839 aa11.7□□□□□ -0.54
MSI2-208ENST00000579466 EHD4Q9H223 541 aa11.7□□□□□ -0.54
MSI2-208ENST00000579466 IL1RAPL2Q9NP60 686 aa11.7□□□□□ -0.54
MSI2-208ENST00000579466 PRDM5Q9NQX1 630 aaPredicted RBP11.7□□□□□ -0.54
MSI2-208ENST00000579466 PRKAG2Q9UGJ0 569 aa11.7□□□□□ -0.54
MSI2-208ENST00000579466 A0A0C4DFX4 3053 aa11.7□□□□□ -0.54
MSI2-208ENST00000579466 COL11A1P12107 1806 aaPredicted RBP11.7□□□□□ -0.54
MSI2-208ENST00000579466 MAGEB6P1A0A0J9YX57 407 aa11.69□□□□□ -0.54
MSI2-208ENST00000579466 RLBP1P12271 317 aa11.69□□□□□ -0.54
MSI2-208ENST00000579466 GUCY1A2P33402 732 aa11.69□□□□□ -0.54
MSI2-208ENST00000579466 RTP1P59025 263 aa11.69□□□□□ -0.54
MSI2-208ENST00000579466 GRB14Q14449 540 aa11.69□□□□□ -0.54
MSI2-208ENST00000579466 PLS1Q14651 629 aa11.69□□□□□ -0.54
MSI2-208ENST00000579466 DPP9Q86TI2 863 aa11.69□□□□□ -0.54
MSI2-208ENST00000579466 SLC44A5Q8NCS7 719 aa11.69□□□□□ -0.54
MSI2-208ENST00000579466 DNAJC2Q99543 621 aaKnown RBP11.69□□□□□ -0.54
MSI2-208ENST00000579466 MCM9Q9NXL9 1143 aa11.69□□□□□ -0.54
MSI2-208ENST00000579466 DNAH12Q6ZR08 3092 aa11.69□□□□□ -0.54
MSI2-208ENST00000579466 PARP14Q460N5 1801 aa11.69□□□□□ -0.54
MSI2-208ENST00000579466 ZNF236Q9UL36 1845 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms