RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 ATAD5Q96QE3 1844 aa8.96□□□□□ -0.97
CDK5RAP3-209ENST00000578663 CCND3P30281 292 aaPredicted RBP8.96□□□□□ -0.98
CDK5RAP3-209ENST00000578663 HOXA7P31268 230 aaPredicted RBP8.96□□□□□ -0.98
CDK5RAP3-209ENST00000578663 RGS2P41220 211 aa8.96□□□□□ -0.98
CDK5RAP3-209ENST00000578663 HMGCS2P54868 508 aa8.96□□□□□ -0.98
CDK5RAP3-209ENST00000578663 IRX3P78415 501 aaPredicted RBP8.96□□□□□ -0.98
CDK5RAP3-209ENST00000578663 TCF15Q12870 199 aa8.96□□□□□ -0.98
CDK5RAP3-209ENST00000578663 SPP2Q13103 211 aa8.96□□□□□ -0.98
CDK5RAP3-209ENST00000578663 HFE2Q6ZVN8 426 aa8.96□□□□□ -0.98
CDK5RAP3-209ENST00000578663 SLF2Q8IX21 1173 aa8.96□□□□□ -0.98
CDK5RAP3-209ENST00000578663 FAM9BQ8IZU0 186 aa8.96□□□□□ -0.98
CDK5RAP3-209ENST00000578663 ZGPATQ8N5A5 531 aaKnown RBP8.96□□□□□ -0.98
CDK5RAP3-209ENST00000578663 FAM163AQ96GL9 167 aaPredicted RBP8.96□□□□□ -0.98
CDK5RAP3-209ENST00000578663 BICC1Q9H694 974 aaKnown RBP8.96□□□□□ -0.98
CDK5RAP3-209ENST00000578663 MAST4O15021 2626 aa8.95□□□□□ -0.98
CDK5RAP3-209ENST00000578663 DDTLA6NHG4 134 aaPredicted RBP8.95□□□□□ -0.98
CDK5RAP3-209ENST00000578663 DNM1LO00429 736 aa8.95□□□□□ -0.98
CDK5RAP3-209ENST00000578663 MAP4K4O95819 1239 aaPredicted RBP8.95□□□□□ -0.98
CDK5RAP3-209ENST00000578663 ID4P47928 161 aa8.95□□□□□ -0.98
CDK5RAP3-209ENST00000578663 MORN1Q5T089 497 aa8.95□□□□□ -0.98
CDK5RAP3-209ENST00000578663 IER5LQ5T953 404 aa8.95□□□□□ -0.98
CDK5RAP3-209ENST00000578663 CCDC84Q86UT8 332 aaPredicted RBP8.95□□□□□ -0.98
CDK5RAP3-209ENST00000578663 ANKRD44Q8N8A2 993 aa8.95□□□□□ -0.98
CDK5RAP3-209ENST00000578663 GPRC5AQ8NFJ5 357 aa8.95□□□□□ -0.98
CDK5RAP3-209ENST00000578663 HERVK_113Q902F9 699 aa8.95□□□□□ -0.98
CDK5RAP3-209ENST00000578663 LPAR1Q92633 364 aa8.95□□□□□ -0.98
CDK5RAP3-209ENST00000578663 AS3MTQ9HBK9 375 aa8.95□□□□□ -0.98
CDK5RAP3-209ENST00000578663 GNL3LQ9NVN8 582 aaKnown RBP8.95□□□□□ -0.98
CDK5RAP3-209ENST00000578663 DENND2AQ9ULE3 1009 aa8.95□□□□□ -0.98
CDK5RAP3-209ENST00000578663 PDS5AQ29RF7 1337 aaKnown RBP8.95□□□□□ -0.98
CDK5RAP3-209ENST00000578663 USP17L5A8MUK1 530 aa8.94□□□□□ -0.98
CDK5RAP3-209ENST00000578663 NBPF7P0C2Y1 421 aaPredicted RBP8.94□□□□□ -0.98
CDK5RAP3-209ENST00000578663 ALADP13716 330 aa8.94□□□□□ -0.98
CDK5RAP3-209ENST00000578663 CAP2P40123 477 aa8.94□□□□□ -0.98
CDK5RAP3-209ENST00000578663 PTPN5P54829 565 aa8.94□□□□□ -0.98
CDK5RAP3-209ENST00000578663 HERVK_113P62684 666 aa8.94□□□□□ -0.98
CDK5RAP3-209ENST00000578663 SNX17Q15036 470 aa8.94□□□□□ -0.98
CDK5RAP3-209ENST00000578663 SKIV2LQ15477 1246 aaKnown RBP8.94□□□□□ -0.98
CDK5RAP3-209ENST00000578663 WDR18Q9BV38 432 aa8.94□□□□□ -0.98
CDK5RAP3-209ENST00000578663 DDX4Q9NQI0 724 aaKnown RBP8.94□□□□□ -0.98
CDK5RAP3-209ENST00000578663 FAM86C1Q9NVL1 165 aa8.94□□□□□ -0.98
CDK5RAP3-209ENST00000578663 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.94□□□□□ -0.98
CDK5RAP3-209ENST00000578663 DDX20Q9UHI6 824 aaKnown RBP8.94□□□□□ -0.98
CDK5RAP3-209ENST00000578663 FBXO3Q9UK99 471 aa8.94□□□□□ -0.98
CDK5RAP3-209ENST00000578663 RALYQ9UKM9 306 aaKnown RBP8.94□□□□□ -0.98
CDK5RAP3-209ENST00000578663 COG5Q9UP83 839 aa8.94□□□□□ -0.98
CDK5RAP3-209ENST00000578663 POTEB3A0JP26 581 aa8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 EYA2O00167 538 aa8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 HOXC6P09630 235 aa8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 BACE1P56817 501 aa8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 ERVK-9P63128 1117 aa8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 ERVK-24P63145 666 aa8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 MAP2K5Q13163 448 aa8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 TRIM60Q495X7 471 aa8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 C1orf53Q5VUE5 145 aa8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 MFSD14CQ5VZR4 134 aa8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 POTEBQ6S5H4 581 aa8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 GPR142Q7Z601 462 aa8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 PLEKHH3Q7Z736 793 aa8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 DZIP1Q86YF9 867 aaKnown RBP8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 GJD3Q8N144 294 aa8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 TXNRD2Q9NNW7 524 aa8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 ALG13Q9NP73 1137 aaKnown RBP8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 GINM1Q9NU53 330 aa8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 HERC5Q9UII4 1024 aaKnown RBP8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 MROH7-TTC4A0A0A0MT08 1334 aa8.93□□□□□ -0.98
CDK5RAP3-209ENST00000578663 COL4A4P53420 1690 aaPredicted RBP8.92□□□□□ -0.98
CDK5RAP3-209ENST00000578663 C19orf81C9J6K1 198 aa8.92□□□□□ -0.98
CDK5RAP3-209ENST00000578663 GLRX3O76003 335 aaKnown RBP8.92□□□□□ -0.98
CDK5RAP3-209ENST00000578663 BTDP43251 543 aa8.92□□□□□ -0.98
CDK5RAP3-209ENST00000578663 RHBDL3P58872 404 aa8.92□□□□□ -0.98
CDK5RAP3-209ENST00000578663 ACAP1Q15027 740 aa8.92□□□□□ -0.98
CDK5RAP3-209ENST00000578663 CCL14Q16627 93 aa8.92□□□□□ -0.98
CDK5RAP3-209ENST00000578663 ATP2B3Q16720 1220 aa8.92□□□□□ -0.98
CDK5RAP3-209ENST00000578663 RASIP1Q5U651 963 aa8.92□□□□□ -0.98
CDK5RAP3-209ENST00000578663 SLC4A10Q6U841 1118 aa8.92□□□□□ -0.98
CDK5RAP3-209ENST00000578663 SLC39A5Q6ZMH5 540 aa8.92□□□□□ -0.98
CDK5RAP3-209ENST00000578663 CCAR1Q8IX12 1150 aaKnown RBP8.92□□□□□ -0.98
CDK5RAP3-209ENST00000578663 FAM178BQ8IXR5 827 aa8.92□□□□□ -0.98
CDK5RAP3-209ENST00000578663 PORCNQ9H237 461 aa8.92□□□□□ -0.98
CDK5RAP3-209ENST00000578663 TMOD4Q9NZQ9 345 aa8.92□□□□□ -0.98
CDK5RAP3-209ENST00000578663 RBPJLQ9UBG7 517 aa8.92□□□□□ -0.98
CDK5RAP3-209ENST00000578663 FLNBO75369 2602 aaKnown RBP8.92□□□□□ -0.98
CDK5RAP3-209ENST00000578663 ZNF236Q9UL36 1845 aa8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 GPR75-ASB3A0A0A6YYF3 556 aa8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 SLC15A5A6NIM6 579 aa8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 CIAO1O76071 339 aa8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 IGHA2P01877 340 aa8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 ASNSP08243 561 aa8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 SLURP2P0DP57 97 aa8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 CCNA1P78396 465 aa8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 EXOSC9Q06265 439 aaKnown RBP8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 PICALMQ13492 652 aa8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 MTMR2Q13614 643 aa8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 SPTY2D1Q68D10 685 aaPredicted RBP8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 CCDC129Q6ZRS4 1044 aa8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 ASCL5Q7RTU5 278 aa8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 ARRDC4Q8NCT1 418 aa8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 KLHDC4Q8TBB5 520 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms