RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 SSC5DA1L4H1 1573 aa10.25□□□□□ -0.77
PPP4R1-210ENST00000578557 A0A1B0GUL6 1792 aa10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 TRIM6-TRIM34B2RNG4 842 aa10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 APPP05067 770 aa10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 OSBPP22059 807 aa10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 HOXA7P31268 230 aaPredicted RBP10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 GCLCP48506 637 aaPredicted RBP10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 BACE1P56817 501 aa10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 SP3Q02447 781 aa10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 DSG2Q14126 1118 aa10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 MFSD10Q14728 455 aa10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 TAF1CQ15572 869 aaPredicted RBP10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 ABCB5Q2M3G0 1257 aa10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 CTU1Q7Z7A3 348 aaKnown RBP10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 BRI3BPQ8WY22 251 aa10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 OSBP2Q969R2 916 aa10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 BCL11AQ9H165 835 aa10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 ARMT1Q9H993 441 aa10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 KANSL2Q9H9L4 492 aa10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 CTNNA3Q9UI47 895 aa10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 AGTPBP1Q9UPW5 1226 aa10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 NDUFB9Q9Y6M9 179 aa10.24□□□□□ -0.77
PPP4R1-210ENST00000578557 GSG1L2A8MUP6 293 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 USP17L12C9JPN9 530 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 USP17L21D6R901 530 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 GPAA1O43292 621 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 EIF5BO60841 1220 aaKnown RBP10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 GJA5P36382 358 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 CCDC178Q5BJE1 867 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 B4GALNT3Q6L9W6 998 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 CTR9Q6PD62 1173 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 USP17L2Q6R6M4 530 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 C16orf86Q6ZW13 317 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 CDAN1Q8IWY9 1227 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 IFNL3Q8IZI9 196 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 ZNF444Q8N0Y2 327 aaPredicted RBP10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 LCORLQ8N3X6 602 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 LPAR1Q92633 364 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 EDC3Q96F86 508 aaKnown RBP10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 DDX27Q96GQ7 796 aaKnown RBP10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 C12orf42Q96LP6 360 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 ZIC5Q96T25 663 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 PTPN18Q99952 460 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 KIAA1683Q9H0B3 1180 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 MKNK2Q9HBH9 465 aa10.23□□□□□ -0.77
PPP4R1-210ENST00000578557 TRPM7Q96QT4 1865 aa10.22□□□□□ -0.77
PPP4R1-210ENST00000578557 BTBD19C9JJ37 291 aa10.22□□□□□ -0.77
PPP4R1-210ENST00000578557 PDHXO00330 501 aa10.22□□□□□ -0.77
PPP4R1-210ENST00000578557 IGF2BP3O00425 579 aaKnown RBP eCLIP10.22□□□□□ -0.77
PPP4R1-210ENST00000578557 TDO2P48775 406 aa10.22□□□□□ -0.77
PPP4R1-210ENST00000578557 PLCD1P51178 756 aa10.22□□□□□ -0.77
PPP4R1-210ENST00000578557 SPP2Q13103 211 aa10.22□□□□□ -0.77
PPP4R1-210ENST00000578557 PPP1R15BQ5SWA1 713 aa10.22□□□□□ -0.77
PPP4R1-210ENST00000578557 TNS4Q8IZW8 715 aa10.22□□□□□ -0.77
PPP4R1-210ENST00000578557 RILPL2Q969X0 211 aa10.22□□□□□ -0.77
PPP4R1-210ENST00000578557 NAPBQ9H115 298 aa10.22□□□□□ -0.77
PPP4R1-210ENST00000578557 ARHGEF10LQ9HCE6 1279 aa10.22□□□□□ -0.77
PPP4R1-210ENST00000578557 HOXC10Q9NYD6 342 aa10.22□□□□□ -0.77
PPP4R1-210ENST00000578557 SAP30BPQ9UHR5 308 aaKnown RBP10.22□□□□□ -0.77
PPP4R1-210ENST00000578557 ANAPC4Q9UJX5 808 aa10.22□□□□□ -0.77
PPP4R1-210ENST00000578557 ZBTB21Q9ULJ3 1066 aa10.22□□□□□ -0.77
PPP4R1-210ENST00000578557 ZMYM6O95789 1325 aa10.22□□□□□ -0.77
PPP4R1-210ENST00000578557 ZNF646O15015 1829 aaPredicted RBP10.21□□□□□ -0.77
PPP4R1-210ENST00000578557 TBC1D8O95759 1140 aa10.21□□□□□ -0.77
PPP4R1-210ENST00000578557 FDX1P10109 184 aa10.21□□□□□ -0.77
PPP4R1-210ENST00000578557 HOXB3P14651 431 aaPredicted RBP10.21□□□□□ -0.77
PPP4R1-210ENST00000578557 SDSP20132 328 aa10.21□□□□□ -0.77
PPP4R1-210ENST00000578557 CDK8P49336 464 aa10.21□□□□□ -0.77
PPP4R1-210ENST00000578557 C17orf99Q6UX52 265 aa10.21□□□□□ -0.77
PPP4R1-210ENST00000578557 NBPF11Q86T75 865 aa10.21□□□□□ -0.77
PPP4R1-210ENST00000578557 PLPP6Q8IY26 295 aa10.21□□□□□ -0.77
PPP4R1-210ENST00000578557 SDR42E1Q8WUS8 393 aa10.21□□□□□ -0.77
PPP4R1-210ENST00000578557 ZNF296Q8WUU4 475 aaPredicted RBP10.21□□□□□ -0.77
PPP4R1-210ENST00000578557 RNF41Q9H4P4 317 aaPredicted RBP10.21□□□□□ -0.77
PPP4R1-210ENST00000578557 DIAPH3Q9NSV4 1193 aa10.21□□□□□ -0.77
PPP4R1-210ENST00000578557 FZD1Q9UP38 647 aa10.21□□□□□ -0.77
PPP4R1-210ENST00000578557 TRIM75PA6NK02 468 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 USP17L15C9J2P7 530 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 USP17L13C9JLJ4 530 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 USP17L11C9JVI0 530 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 USP17L18D6R9N7 530 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 USP17L22D6RA61 530 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 USP17L17D6RBQ6 530 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 USP17L19D6RCP7 530 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 USP17L20D6RJB6 530 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 GH2P01242 217 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 SHMT1P34896 483 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 USP17L24Q0WX57 530 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 CRHR2Q13324 411 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 FBXO46Q6PJ61 603 aaPredicted RBP10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 CASC1Q6TDU7 716 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 LBX2Q6XYB7 198 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 FAM43AQ8N2R8 423 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 MB21D1Q8N884 522 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 RAD50Q92878 1312 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 DSCC1Q9BVC3 393 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 THSD7BQ9C0I4 1608 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 DNAJC18Q9H819 358 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 NYAP2Q9P242 653 aa10.2□□□□□ -0.78
PPP4R1-210ENST00000578557 MYPNQ86TC9 1320 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms