RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 MKI67P46013 3256 aaKnown RBP27.59■■■□□ 2.01
VAPA-205ENST00000578314 SEPT2Q15019 361 aa27.59■■■□□ 2.01
VAPA-205ENST00000578314 TMEM106CQ9BVX2 250 aa27.59■■■□□ 2.01
VAPA-205ENST00000578314 GABRQQ9UN88 632 aa27.59■■■□□ 2.01
VAPA-205ENST00000578314 NAV1Q8NEY1 1877 aa27.59■■■□□ 2.01
VAPA-205ENST00000578314 CYP2D7A0A087X1C5 515 aa27.58■■■□□ 2.01
VAPA-205ENST00000578314 TNPO2O14787 897 aaKnown RBP27.58■■■□□ 2.01
VAPA-205ENST00000578314 EN2P19622 333 aaPredicted RBP27.58■■■□□ 2.01
VAPA-205ENST00000578314 HERVK_113P62684 666 aa27.58■■■□□ 2.01
VAPA-205ENST00000578314 GIMAP6Q6P9H5 292 aa27.58■■■□□ 2.01
VAPA-205ENST00000578314 FEZ1Q99689 392 aa27.58■■■□□ 2.01
VAPA-205ENST00000578314 STAP2Q9UGK3 403 aa27.58■■■□□ 2.01
VAPA-205ENST00000578314 GSG1L2A8MUP6 293 aa27.57■■■□□ 2
VAPA-205ENST00000578314 SMIM22K7EJ46 135 aa27.57■■■□□ 2
VAPA-205ENST00000578314 GRK4P32298 578 aa27.57■■■□□ 2
VAPA-205ENST00000578314 CDK8P49336 464 aa27.57■■■□□ 2
VAPA-205ENST00000578314 TMEM179Q6ZVK1 233 aa27.57■■■□□ 2
VAPA-205ENST00000578314 C16orf86Q6ZW13 317 aa27.57■■■□□ 2
VAPA-205ENST00000578314 RWDD1Q9H446 243 aaPredicted RBP27.57■■■□□ 2
VAPA-205ENST00000578314 MPHOSPH10O00566 681 aaKnown RBP27.56■■■□□ 2
VAPA-205ENST00000578314 ZYXQ15942 572 aaKnown RBP27.56■■■□□ 2
VAPA-205ENST00000578314 SBK1Q52WX2 424 aa27.56■■■□□ 2
VAPA-205ENST00000578314 EXOC6Q8TAG9 804 aa27.56■■■□□ 2
VAPA-205ENST00000578314 GTF3C2Q8WUA4 911 aaPredicted RBP27.56■■■□□ 2
VAPA-205ENST00000578314 COA7Q96BR5 231 aa27.56■■■□□ 2
VAPA-205ENST00000578314 CCDC17Q96LX7 622 aa27.56■■■□□ 2
VAPA-205ENST00000578314 ARPP21Q9UBL0 812 aaPredicted RBP27.56■■■□□ 2
VAPA-205ENST00000578314 USP17L15C9J2P7 530 aa27.55■■■□□ 2
VAPA-205ENST00000578314 USP17L13C9JLJ4 530 aa27.55■■■□□ 2
VAPA-205ENST00000578314 USP17L11C9JVI0 530 aa27.55■■■□□ 2
VAPA-205ENST00000578314 USP17L18D6R9N7 530 aa27.55■■■□□ 2
VAPA-205ENST00000578314 USP17L22D6RA61 530 aa27.55■■■□□ 2
VAPA-205ENST00000578314 USP17L17D6RBQ6 530 aa27.55■■■□□ 2
VAPA-205ENST00000578314 USP17L19D6RCP7 530 aa27.55■■■□□ 2
VAPA-205ENST00000578314 USP17L20D6RJB6 530 aa27.55■■■□□ 2
VAPA-205ENST00000578314 GPAA1O43292 621 aa27.55■■■□□ 2
VAPA-205ENST00000578314 GNAT2P19087 354 aa27.55■■■□□ 2
VAPA-205ENST00000578314 FLT3LGP49771 235 aa27.55■■■□□ 2
VAPA-205ENST00000578314 USP17L24Q0WX57 530 aa27.55■■■□□ 2
VAPA-205ENST00000578314 IRF5Q13568 498 aa27.55■■■□□ 2
VAPA-205ENST00000578314 SMC5Q8IY18 1101 aa27.55■■■□□ 2
VAPA-205ENST00000578314 RBPJLQ9UBG7 517 aa27.55■■■□□ 2
VAPA-205ENST00000578314 A0A1W2PRG0 241 aa27.54■■■□□ 2
VAPA-205ENST00000578314 MGAMO43451 1857 aa27.54■■■□□ 2
VAPA-205ENST00000578314 AKR1B1P15121 316 aa27.54■■■□□ 2
VAPA-205ENST00000578314 CATSPERGQ6ZRH7 1159 aa27.54■■■□□ 2
VAPA-205ENST00000578314 SLAIN1Q8ND83 568 aa27.54■■■□□ 2
VAPA-205ENST00000578314 TXNRD2Q9NNW7 524 aa27.54■■■□□ 2
VAPA-205ENST00000578314 MYH7P12883 1935 aa27.53■■■□□ 2
VAPA-205ENST00000578314 M0R2C6 588 aa27.53■■■□□ 2
VAPA-205ENST00000578314 SLC34A2O95436 690 aa27.53■■■□□ 2
VAPA-205ENST00000578314 MYCP01106 439 aaPredicted RBP27.53■■■□□ 2
VAPA-205ENST00000578314 VCAM1P19320 739 aa27.53■■■□□ 2
VAPA-205ENST00000578314 PDE1AP54750 535 aa27.53■■■□□ 2
VAPA-205ENST00000578314 POTEEQ6S8J3 1075 aa27.53■■■□□ 2
VAPA-205ENST00000578314 SIAH1Q8IUQ4 282 aa27.53■■■□□ 2
VAPA-205ENST00000578314 GPRC5AQ8NFJ5 357 aa27.53■■■□□ 2
VAPA-205ENST00000578314 PXYLP1Q8TE99 480 aa27.53■■■□□ 2
VAPA-205ENST00000578314 FSD1Q9BTV5 496 aa27.53■■■□□ 2
VAPA-205ENST00000578314 ZMYM1Q5SVZ6 1142 aa27.52■■■□□ 2
VAPA-205ENST00000578314 SUPT16HQ9Y5B9 1047 aaKnown RBP27.52■■■□□ 2
VAPA-205ENST00000578314 PATL2C9JE40 543 aaKnown RBP27.51■■□□□ 1.99
VAPA-205ENST00000578314 ADCY3O60266 1144 aa27.51■■□□□ 1.99
VAPA-205ENST00000578314 IGHDP01880 384 aa27.51■■□□□ 1.99
VAPA-205ENST00000578314 GJD2Q9UKL4 321 aa27.51■■□□□ 1.99
VAPA-205ENST00000578314 PEX10O60683 326 aa27.5■■□□□ 1.99
VAPA-205ENST00000578314 MTFR1Q15390 333 aa27.5■■□□□ 1.99
VAPA-205ENST00000578314 Q3C1V9 767 aa27.5■■□□□ 1.99
VAPA-205ENST00000578314 EVI5LQ96CN4 794 aa27.5■■□□□ 1.99
VAPA-205ENST00000578314 SEC62Q99442 399 aaKnown RBP27.5■■□□□ 1.99
VAPA-205ENST00000578314 EPB41L4AQ9HCS5 686 aaPredicted RBP27.5■■□□□ 1.99
VAPA-205ENST00000578314 ERVK-9P63128 1117 aa27.49■■□□□ 1.99
VAPA-205ENST00000578314 ERVK-24P63145 666 aa27.49■■□□□ 1.99
VAPA-205ENST00000578314 LBX2Q6XYB7 198 aa27.49■■□□□ 1.99
VAPA-205ENST00000578314 RPAP3Q9H6T3 665 aaPredicted RBP27.49■■□□□ 1.99
VAPA-205ENST00000578314 TMX2Q9Y320 296 aa27.49■■□□□ 1.99
VAPA-205ENST00000578314 RABGAP1Q9Y3P9 1069 aa27.49■■□□□ 1.99
VAPA-205ENST00000578314 UBXN2AP68543 259 aa27.48■■□□□ 1.99
VAPA-205ENST00000578314 ICA1Q05084 483 aa27.48■■□□□ 1.99
VAPA-205ENST00000578314 IFNL3Q8IZI9 196 aa27.48■■□□□ 1.99
VAPA-205ENST00000578314 LNPKQ9C0E8 428 aa27.48■■□□□ 1.99
VAPA-205ENST00000578314 ARHGEF10LQ9HCE6 1279 aa27.48■■□□□ 1.99
VAPA-205ENST00000578314 BIN2Q9UBW5 565 aaPredicted RBP27.48■■□□□ 1.99
VAPA-205ENST00000578314 BAZ2AQ9UIF9 1905 aaKnown RBP27.47■■□□□ 1.99
VAPA-205ENST00000578314 MINDY4BA8MYZ0 360 aa27.47■■□□□ 1.99
VAPA-205ENST00000578314 APPP05067 770 aa27.47■■□□□ 1.99
VAPA-205ENST00000578314 TICAM2Q86XR7 235 aa27.47■■□□□ 1.99
VAPA-205ENST00000578314 KANSL2Q9H9L4 492 aa27.47■■□□□ 1.99
VAPA-205ENST00000578314 ROBO3Q96MS0 1386 aa27.47■■□□□ 1.99
VAPA-205ENST00000578314 CNMDO75829 334 aa27.46■■□□□ 1.99
VAPA-205ENST00000578314 ELNP15502 786 aa27.46■■□□□ 1.99
VAPA-205ENST00000578314 MAPK4P31152 587 aa27.46■■□□□ 1.99
VAPA-205ENST00000578314 TDO2P48775 406 aa27.46■■□□□ 1.99
VAPA-205ENST00000578314 LPAR1Q92633 364 aa27.46■■□□□ 1.99
VAPA-205ENST00000578314 PAGR1Q9BTK6 254 aa27.46■■□□□ 1.99
VAPA-205ENST00000578314 NACAP1Q9BZK3 213 aa27.46■■□□□ 1.99
VAPA-205ENST00000578314 SH2D4AQ9H788 454 aa27.46■■□□□ 1.99
VAPA-205ENST00000578314 CCL5P13501 91 aa27.45■■□□□ 1.98
VAPA-205ENST00000578314 NUCB1Q02818 461 aa27.45■■□□□ 1.98
VAPA-205ENST00000578314 KIAA1755Q5JYT7 1200 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms