RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 RNF181Q9P0P0 153 aa21.63■■□□□ 1.05
PRKCA-203ENST00000578063 ORC3Q9UBD5 711 aaPredicted RBP21.63■■□□□ 1.05
PRKCA-203ENST00000578063 HERC5Q9UII4 1024 aaKnown RBP21.63■■□□□ 1.05
PRKCA-203ENST00000578063 STX8Q9UNK0 236 aa21.63■■□□□ 1.05
PRKCA-203ENST00000578063 H7C1D1 291 aa21.62■■□□□ 1.05
PRKCA-203ENST00000578063 FDPSP14324 419 aaKnown RBP21.62■■□□□ 1.05
PRKCA-203ENST00000578063 AKR1B1P15121 316 aa21.62■■□□□ 1.05
PRKCA-203ENST00000578063 TNFAIP1Q13829 316 aa21.62■■□□□ 1.05
PRKCA-203ENST00000578063 PNMA1Q8ND90 353 aa21.62■■□□□ 1.05
PRKCA-203ENST00000578063 CTCFLQ8NI51 663 aaPredicted RBP21.62■■□□□ 1.05
PRKCA-203ENST00000578063 MAP3K14Q99558 947 aa21.62■■□□□ 1.05
PRKCA-203ENST00000578063 IGKV6D-41A0A0C4DH26 115 aa21.61■■□□□ 1.05
PRKCA-203ENST00000578063 F13A1P00488 732 aa21.61■■□□□ 1.05
PRKCA-203ENST00000578063 GPR162Q16538 588 aa21.61■■□□□ 1.05
PRKCA-203ENST00000578063 KIF4BQ2VIQ3 1234 aa21.61■■□□□ 1.05
PRKCA-203ENST00000578063 FOXD4L5Q5VV16 416 aaPredicted RBP21.61■■□□□ 1.05
PRKCA-203ENST00000578063 TATDN1Q6P1N9 297 aa21.61■■□□□ 1.05
PRKCA-203ENST00000578063 RGS22Q8NE09 1264 aa21.61■■□□□ 1.05
PRKCA-203ENST00000578063 FOXD4L4Q8WXT5 416 aaPredicted RBP21.61■■□□□ 1.05
PRKCA-203ENST00000578063 CEP95Q96GE4 821 aa21.61■■□□□ 1.05
PRKCA-203ENST00000578063 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.61■■□□□ 1.05
PRKCA-203ENST00000578063 ATP6V1DQ9Y5K8 247 aa21.61■■□□□ 1.05
PRKCA-203ENST00000578063 MYH8P13535 1937 aa21.61■■□□□ 1.05
PRKCA-203ENST00000578063 H3BQV1 296 aa21.6■■□□□ 1.05
PRKCA-203ENST00000578063 BAG4O95429 457 aaKnown RBP21.6■■□□□ 1.05
PRKCA-203ENST00000578063 TOP1P11387 765 aaKnown RBP21.6■■□□□ 1.05
PRKCA-203ENST00000578063 KIF5BP33176 963 aa21.6■■□□□ 1.05
PRKCA-203ENST00000578063 MCM4P33991 863 aa21.6■■□□□ 1.05
PRKCA-203ENST00000578063 RBM26Q5T8P6 1007 aaKnown RBP21.6■■□□□ 1.05
PRKCA-203ENST00000578063 IFFO2Q5TF58 517 aa21.6■■□□□ 1.05
PRKCA-203ENST00000578063 TMEM47Q9BQJ4 181 aa21.6■■□□□ 1.05
PRKCA-203ENST00000578063 GPRC5DQ9NZD1 345 aa21.6■■□□□ 1.05
PRKCA-203ENST00000578063 FMNL1O95466 1100 aaPredicted RBP21.6■■□□□ 1.05
PRKCA-203ENST00000578063 SAMD7Q7Z3H4 446 aa21.6■■□□□ 1.05
PRKCA-203ENST00000578063 TRIM22Q8IYM9 498 aa21.6■■□□□ 1.05
PRKCA-203ENST00000578063 MTMR4Q9NYA4 1195 aa21.6■■□□□ 1.05
PRKCA-203ENST00000578063 DDX11L8A8MPP1 907 aa21.59■■□□□ 1.05
PRKCA-203ENST00000578063 EGFRP00533 1210 aa21.59■■□□□ 1.05
PRKCA-203ENST00000578063 SSRP1Q08945 709 aaKnown RBP21.59■■□□□ 1.05
PRKCA-203ENST00000578063 CERKLQ49MI3 558 aaPredicted RBP21.59■■□□□ 1.05
PRKCA-203ENST00000578063 TBC1D10BQ4KMP7 808 aaPredicted RBP21.59■■□□□ 1.05
PRKCA-203ENST00000578063 CDC37L1Q7L3B6 337 aa21.59■■□□□ 1.05
PRKCA-203ENST00000578063 PPFIA3O75145 1194 aa21.58■■□□□ 1.05
PRKCA-203ENST00000578063 C9orf131Q5VYM1 1079 aa21.58■■□□□ 1.05
PRKCA-203ENST00000578063 WASF1Q92558 559 aa21.58■■□□□ 1.05
PRKCA-203ENST00000578063 PHKBQ93100 1093 aa21.58■■□□□ 1.05
PRKCA-203ENST00000578063 FAM196BA6NMK8 535 aa21.58■■□□□ 1.04
PRKCA-203ENST00000578063 GOLGA6L22H0YM25 854 aa21.58■■□□□ 1.04
PRKCA-203ENST00000578063 MPHOSPH10O00566 681 aaKnown RBP21.58■■□□□ 1.04
PRKCA-203ENST00000578063 TTLL1O95922 423 aa21.58■■□□□ 1.04
PRKCA-203ENST00000578063 NBR1Q14596 966 aa21.58■■□□□ 1.04
PRKCA-203ENST00000578063 TMTC3Q6ZXV5 915 aa21.58■■□□□ 1.04
PRKCA-203ENST00000578063 SLC26A6Q9BXS9 759 aa21.58■■□□□ 1.04
PRKCA-203ENST00000578063 RNF26Q9BY78 433 aaPredicted RBP21.58■■□□□ 1.04
PRKCA-203ENST00000578063 TMEM39BQ9GZU3 492 aa21.58■■□□□ 1.04
PRKCA-203ENST00000578063 GREB1LQ9C091 1923 aaPredicted RBP21.57■■□□□ 1.04
PRKCA-203ENST00000578063 TBC1D12O60347 775 aa21.57■■□□□ 1.04
PRKCA-203ENST00000578063 GRM4Q14833 912 aa21.57■■□□□ 1.04
PRKCA-203ENST00000578063 NBPF11Q86T75 865 aa21.57■■□□□ 1.04
PRKCA-203ENST00000578063 C8orf76Q96K31 380 aa21.57■■□□□ 1.04
PRKCA-203ENST00000578063 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.57■■□□□ 1.048e-8■■■■■ 39.7
PRKCA-203ENST00000578063 PTMSP20962 102 aa21.56■■□□□ 1.04
PRKCA-203ENST00000578063 GNAQP50148 359 aa21.56■■□□□ 1.04
PRKCA-203ENST00000578063 TMEM179Q6ZVK1 233 aa21.56■■□□□ 1.04
PRKCA-203ENST00000578063 ALG1Q9BT22 464 aa21.56■■□□□ 1.04
PRKCA-203ENST00000578063 GRIN3BO60391 1043 aa21.55■■□□□ 1.04
PRKCA-203ENST00000578063 DEXIO95424 95 aa21.55■■□□□ 1.04
PRKCA-203ENST00000578063 SLURP2P0DP57 97 aa21.55■■□□□ 1.04
PRKCA-203ENST00000578063 RASA3Q14644 834 aa21.55■■□□□ 1.04
PRKCA-203ENST00000578063 PGAP2Q9UHJ9 254 aa21.55■■□□□ 1.04
PRKCA-203ENST00000578063 HACL1Q9UJ83 578 aa21.55■■□□□ 1.04
PRKCA-203ENST00000578063 ZC3H4Q9UPT8 1303 aaKnown RBP21.55■■□□□ 1.04
PRKCA-203ENST00000578063 PLEKHA8P1O95397 391 aa21.55■■□□□ 1.04
PRKCA-203ENST00000578063 LMOD1P29536 600 aaPredicted RBP21.55■■□□□ 1.04
PRKCA-203ENST00000578063 AKAP17AQ02040 695 aaKnown RBP21.55■■□□□ 1.04
PRKCA-203ENST00000578063 FUT2Q10981 343 aa21.55■■□□□ 1.04
PRKCA-203ENST00000578063 ABCB5Q2M3G0 1257 aa21.55■■□□□ 1.04
PRKCA-203ENST00000578063 APOBEC3FQ8IUX4 373 aaKnown RBP21.55■■□□□ 1.04
PRKCA-203ENST00000578063 ZSCAN16Q9H4T2 348 aaPredicted RBP21.55■■□□□ 1.04
PRKCA-203ENST00000578063 KANSL2Q9H9L4 492 aa21.55■■□□□ 1.04
PRKCA-203ENST00000578063 SRCAPQ6ZRS2 3230 aa21.55■■□□□ 1.04
PRKCA-203ENST00000578063 FBXO18Q8NFZ0 1043 aa21.54■■□□□ 1.04
PRKCA-203ENST00000578063 DDNO94850 711 aaPredicted RBP21.53■■□□□ 1.04
PRKCA-203ENST00000578063 FOSBP53539 338 aa21.53■■□□□ 1.04
PRKCA-203ENST00000578063 CMTR1Q8N1G2 835 aaKnown RBP21.53■■□□□ 1.04
PRKCA-203ENST00000578063 TRPM4Q8TD43 1214 aa21.53■■□□□ 1.04
PRKCA-203ENST00000578063 LZTS2Q9BRK4 669 aa21.53■■□□□ 1.04
PRKCA-203ENST00000578063 CABP5Q9NP86 173 aa21.53■■□□□ 1.04
PRKCA-203ENST00000578063 RBM27Q9P2N5 1060 aaKnown RBP21.53■■□□□ 1.04
PRKCA-203ENST00000578063 CNTNAP5Q8WYK1 1306 aa21.53■■□□□ 1.04
PRKCA-203ENST00000578063 PRPF3O43395 683 aaKnown RBP21.52■■□□□ 1.04
PRKCA-203ENST00000578063 MAP3K10Q02779 954 aa21.52■■□□□ 1.04
PRKCA-203ENST00000578063 TRIM29Q14134 588 aa21.52■■□□□ 1.04
PRKCA-203ENST00000578063 MCTP1Q6DN14 999 aa21.52■■□□□ 1.04
PRKCA-203ENST00000578063 FERMT3Q86UX7 667 aa21.52■■□□□ 1.04
PRKCA-203ENST00000578063 CCDC82Q8N4S0 544 aa21.52■■□□□ 1.04
PRKCA-203ENST00000578063 NYAP2Q9P242 653 aa21.52■■□□□ 1.04
PRKCA-203ENST00000578063 CLIP2Q9UDT6 1046 aa21.52■■□□□ 1.04
PRKCA-203ENST00000578063 MAD2L2Q9UI95 211 aa21.52■■□□□ 1.04
PRKCA-203ENST00000578063 GDF11O95390 407 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms