RNA–Protein interactions for RNA: ENST00000577134.1

SPOP-222, Transcript of speckle type BTB/POZ protein, human

TSL 2

Gene SPOP, Length 421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOP-222	ENST00000577134	LRRC2	Q9BYS8	371 aa		11.72	□□□□□ -0.53
SPOP-222	ENST00000577134	UPF3B	Q9BZI7	483 aa	Known RBP	11.72	□□□□□ -0.53
SPOP-222	ENST00000577134	TM6SF1	Q9BZW5	370 aa		11.72	□□□□□ -0.53
SPOP-222	ENST00000577134	KANSL2	Q9H9L4	492 aa		11.72	□□□□□ -0.53
SPOP-222	ENST00000577134	ZSWIM6	Q9HCJ5	1215 aa		11.72	□□□□□ -0.53
SPOP-222	ENST00000577134	GINM1	Q9NU53	330 aa		11.72	□□□□□ -0.53
SPOP-222	ENST00000577134	TCP11L1	Q9NUJ3	509 aa		11.72	□□□□□ -0.53
SPOP-222	ENST00000577134	ZHX2	Q9Y6X8	837 aa		11.72	□□□□□ -0.53
SPOP-222	ENST00000577134	TNKS	O95271	1327 aa		11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	MYH4	Q9Y623	1939 aa		11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	HMGB1	P09429	215 aa	Known RBP	11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	EEF2	P13639	858 aa	Known RBP	11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	RPS6KB1	P23443	525 aa		11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	NT5C2	P49902	561 aa		11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	ATP2B2	Q01814	1243 aa		11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	ICA1	Q05084	483 aa		11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	RUFY3	Q7L099	469 aa		11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	IQCA1	Q86XH1	822 aa		11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	ERO1B	Q86YB8	467 aa		11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	SIAH1	Q8IUQ4	282 aa		11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	OPTN	Q96CV9	577 aa		11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	OTUD5	Q96G74	571 aa		11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	UBAC1	Q9BSL1	405 aa		11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	GPHN	Q9NQX3	736 aa	Predicted RBP	11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	MTMR4	Q9NYA4	1195 aa		11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	CLIP2	Q9UDT6	1046 aa		11.71	□□□□□ -0.53
SPOP-222	ENST00000577134	CYP46A1	Q9Y6A2	500 aa		11.71	□□□□□ -0.53
SPOP-222	ENST00000577134		A0A1W2PRG0	241 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	SPDYE5	A6NIY4	337 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	IFIT3	O14879	490 aa	Known RBP	11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	GJA5	P36382	358 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	ECE1	P42892	770 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	ZNF157	P51786	506 aa	Predicted RBP	11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	PPAT	Q06203	517 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	MKRN3	Q13064	507 aa	Known RBP	11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	SEC23A	Q15436	765 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	TMEM67	Q5HYA8	995 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	RCSD1	Q6JBY9	416 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	RGMB	Q6NW40	437 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	ENAH	Q8N8S7	591 aa	Predicted RBP	11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	ACER1	Q8TDN7	264 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	IGDCC4	Q8TDY8	1250 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	WNK4	Q96J92	1243 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	AS3MT	Q9HBK9	375 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	SENP2	Q9HC62	589 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	CREBZF	Q9NS37	354 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	NYAP2	Q9P242	653 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	STX8	Q9UNK0	236 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	AFG3L2	Q9Y4W6	797 aa		11.7	□□□□□ -0.54
SPOP-222	ENST00000577134	WDR19	Q8NEZ3	1342 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	ERICH2	A1L162	156 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	TRIM75P	A6NK02	468 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	SH2B2	O14492	632 aa	Predicted RBP	11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	TTLL1	O95922	423 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	NOV	P48745	357 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	NEK4	P51957	841 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	C1QTNF8	P60827	252 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	HTRA3	P83110	453 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	SPP2	Q13103	211 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	WTAP	Q15007	396 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	SART3	Q15020	963 aa	Known RBP	11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	CCDC178	Q5BJE1	867 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134		Q6ZUG5	572 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	DGKH	Q86XP1	1220 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	ZNF280C	Q8ND82	737 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	ANKS1A	Q92625	1134 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	TMEM87B	Q96K49	555 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	TMEM47	Q9BQJ4	181 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	WDR18	Q9BV38	432 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	LY9	Q9HBG7	655 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	ARHGEF10L	Q9HCE6	1279 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	PDRG1	Q9NUG6	133 aa		11.69	□□□□□ -0.54
SPOP-222	ENST00000577134	USP17L10	C9JJH3	530 aa		11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	IRF6	O14896	467 aa		11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	FGD1	P98174	961 aa		11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	PPIL2	Q13356	520 aa		11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	DGKZ	Q13574	1117 aa		11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	MTMR2	Q13614	643 aa		11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	ZYX	Q15942	572 aa	Known RBP	11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	PPP4R3B	Q5MIZ7	849 aa		11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	IFIT1B	Q5T764	474 aa	Known RBP	11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	SPRYD7	Q5W111	196 aa		11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	RASAL3	Q86YV0	1011 aa		11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	LRRC47	Q8N1G4	583 aa	Known RBP	11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	MKL1	Q969V6	931 aa		11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	CHMP4C	Q96CF2	233 aa		11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	HHIPL1	Q96JK4	782 aa		11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	TTC14	Q96N46	770 aa		11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	FEZ1	Q99689	392 aa		11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	MTA3	Q9BTC8	594 aa		11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	TBC1D2	Q9BYX2	928 aa		11.68	□□□□□ -0.54
SPOP-222	ENST00000577134	RASSF10	A6NK89	507 aa		11.67	□□□□□ -0.54
SPOP-222	ENST00000577134	RAD21	O60216	631 aa		11.67	□□□□□ -0.54
SPOP-222	ENST00000577134	SLC10A3	P09131	477 aa		11.67	□□□□□ -0.54
SPOP-222	ENST00000577134	TOP1	P11387	765 aa	Known RBP	11.67	□□□□□ -0.54
SPOP-222	ENST00000577134	GRM1	Q13255	1194 aa		11.67	□□□□□ -0.54
SPOP-222	ENST00000577134	TOB2	Q14106	344 aa	Predicted RBP	11.67	□□□□□ -0.54
SPOP-222	ENST00000577134	RABEP1	Q15276	862 aa		11.67	□□□□□ -0.54
SPOP-222	ENST00000577134	DEFB115	Q30KQ5	88 aa		11.67	□□□□□ -0.54

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