RNA–Protein interactions for RNA: ENST00000576952.1

POLR2A-208, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-208ENST00000576952 FEZ1Q99689 392 aa18.28■□□□□ 0.52
POLR2A-208ENST00000576952 ARHGAP39Q9C0H5 1083 aa18.28■□□□□ 0.52
POLR2A-208ENST00000576952 HELLSQ9NRZ9 838 aa18.28■□□□□ 0.52
POLR2A-208ENST00000576952 EMILIN3Q9NT22 766 aa18.28■□□□□ 0.52
POLR2A-208ENST00000576952 TMOD4Q9NZQ9 345 aa18.28■□□□□ 0.52
POLR2A-208ENST00000576952 TAOK2Q9UL54 1235 aa18.28■□□□□ 0.52
POLR2A-208ENST00000576952 ROBO3Q96MS0 1386 aa18.28■□□□□ 0.52
POLR2A-208ENST00000576952 COL11A1P12107 1806 aaPredicted RBP18.28■□□□□ 0.52
POLR2A-208ENST00000576952 BCRP11274 1271 aa18.27■□□□□ 0.52
POLR2A-208ENST00000576952 VPS53Q5VIR6 699 aa18.27■□□□□ 0.52
POLR2A-208ENST00000576952 TMEM179Q6ZVK1 233 aa18.27■□□□□ 0.52
POLR2A-208ENST00000576952 SMCR8Q8TEV9 937 aaPredicted RBP18.27■□□□□ 0.52
POLR2A-208ENST00000576952 NACAP1Q9BZK3 213 aa18.27■□□□□ 0.52
POLR2A-208ENST00000576952 EFCC1Q9HA90 598 aa18.27■□□□□ 0.52
POLR2A-208ENST00000576952 SDSP20132 328 aa18.26■□□□□ 0.51
POLR2A-208ENST00000576952 CTGFP29279 349 aa18.26■□□□□ 0.51
POLR2A-208ENST00000576952 LACTBP83111 547 aaPredicted RBP18.26■□□□□ 0.51
POLR2A-208ENST00000576952 PABPC4Q13310 644 aaKnown RBP eCLIP18.26■□□□□ 0.51
POLR2A-208ENST00000576952 PKN2Q16513 984 aaKnown RBP18.26■□□□□ 0.51
POLR2A-208ENST00000576952 MCMDC2Q4G0Z9 681 aa18.26■□□□□ 0.51
POLR2A-208ENST00000576952 USP17L2Q6R6M4 530 aa18.26■□□□□ 0.51
POLR2A-208ENST00000576952 ZNF589Q86UQ0 364 aaPredicted RBP18.26■□□□□ 0.51
POLR2A-208ENST00000576952 TICAM2Q86XR7 235 aa18.26■□□□□ 0.51
POLR2A-208ENST00000576952 CCDC17Q96LX7 622 aa18.26■□□□□ 0.51
POLR2A-208ENST00000576952 NAPBQ9H115 298 aa18.26■□□□□ 0.51
POLR2A-208ENST00000576952 ASCC2Q9H1I8 757 aaPredicted RBP18.26■□□□□ 0.51
POLR2A-208ENST00000576952 PNMA3Q9UL41 463 aa18.26■□□□□ 0.51
POLR2A-208ENST00000576952 A0A1W2PRG0 241 aa18.25■□□□□ 0.51
POLR2A-208ENST00000576952 GSPT1P15170 499 aaKnown RBP18.25■□□□□ 0.51
POLR2A-208ENST00000576952 TTC22Q5TAA0 569 aa18.25■□□□□ 0.51
POLR2A-208ENST00000576952 FBXO46Q6PJ61 603 aaPredicted RBP18.25■□□□□ 0.51
POLR2A-208ENST00000576952 KIAA1683Q9H0B3 1180 aa18.25■□□□□ 0.51
POLR2A-208ENST00000576952 PLXNB2O15031 1838 aa18.24■□□□□ 0.51
POLR2A-208ENST00000576952 CCDC85CA6NKD9 419 aa18.24■□□□□ 0.51
POLR2A-208ENST00000576952 RASA1P20936 1047 aa18.24■□□□□ 0.51
POLR2A-208ENST00000576952 OSBPP22059 807 aa18.24■□□□□ 0.51
POLR2A-208ENST00000576952 HOXA7P31268 230 aaPredicted RBP18.24■□□□□ 0.51
POLR2A-208ENST00000576952 KIF22Q14807 665 aa18.24■□□□□ 0.51
POLR2A-208ENST00000576952 SIAH1Q8IUQ4 282 aa18.24■□□□□ 0.51
POLR2A-208ENST00000576952 C12orf42Q96LP6 360 aa18.24■□□□□ 0.51
POLR2A-208ENST00000576952 MKNK2Q9HBH9 465 aa18.24■□□□□ 0.51
POLR2A-208ENST00000576952 HPS5Q9UPZ3 1129 aa18.24■□□□□ 0.51
POLR2A-208ENST00000576952 HTTP42858 3142 aa18.24■□□□□ 0.51
POLR2A-208ENST00000576952 PRDM1O75626 825 aa18.23■□□□□ 0.51
POLR2A-208ENST00000576952 USP14P54578 494 aa18.23■□□□□ 0.51
POLR2A-208ENST00000576952 IRX3P78415 501 aaPredicted RBP18.23■□□□□ 0.51
POLR2A-208ENST00000576952 ICA1Q05084 483 aa18.23■□□□□ 0.51
POLR2A-208ENST00000576952 PPARAQ07869 468 aa18.23■□□□□ 0.51
POLR2A-208ENST00000576952 ANKRD13CQ8N6S4 541 aa18.23■□□□□ 0.51
POLR2A-208ENST00000576952 PTPN22Q9Y2R2 807 aa18.23■□□□□ 0.51
POLR2A-208ENST00000576952 CENPFP49454 3210 aa18.23■□□□□ 0.51
POLR2A-208ENST00000576952 CCDC171Q6TFL3 1326 aa18.23■□□□□ 0.51
POLR2A-208ENST00000576952 ZNFX1Q9P2E3 1918 aaKnown RBP18.22■□□□□ 0.51
POLR2A-208ENST00000576952 VCAM1P19320 739 aa18.22■□□□□ 0.51
POLR2A-208ENST00000576952 PSMC4P43686 418 aa18.22■□□□□ 0.51
POLR2A-208ENST00000576952 CWC27Q6UX04 472 aaKnown RBP18.22■□□□□ 0.51
POLR2A-208ENST00000576952 TRIM47Q96LD4 638 aa18.22■□□□□ 0.51
POLR2A-208ENST00000576952 P2RX7Q99572 595 aaKnown RBP18.22■□□□□ 0.51
POLR2A-208ENST00000576952 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.22■□□□□ 0.51
POLR2A-208ENST00000576952 DIAPH3Q9NSV4 1193 aa18.22■□□□□ 0.51
POLR2A-208ENST00000576952 PEX10O60683 326 aa18.21■□□□□ 0.51
POLR2A-208ENST00000576952 HSPD1P10809 573 aaKnown RBP18.21■□□□□ 0.51
POLR2A-208ENST00000576952 EEF2P13639 858 aaKnown RBP18.21■□□□□ 0.51
POLR2A-208ENST00000576952 ATP2B2Q01814 1243 aa18.21■□□□□ 0.51
POLR2A-208ENST00000576952 CTDSPL2Q05D32 466 aa18.21■□□□□ 0.51
POLR2A-208ENST00000576952 ARHGEF6Q15052 776 aa18.21■□□□□ 0.51
POLR2A-208ENST00000576952 KIAA1755Q5JYT7 1200 aa18.21■□□□□ 0.51
POLR2A-208ENST00000576952 ARHGEF10LQ9HCE6 1279 aa18.21■□□□□ 0.51
POLR2A-208ENST00000576952 A0A0G2JMZ2 1700 aa18.2■□□□□ 0.5
POLR2A-208ENST00000576952 RBBP6Q7Z6E9 1792 aaKnown RBP18.2■□□□□ 0.5
POLR2A-208ENST00000576952 FMNL1O95466 1100 aaPredicted RBP18.2■□□□□ 0.5
POLR2A-208ENST00000576952 FGAP02671 866 aa18.2■□□□□ 0.5
POLR2A-208ENST00000576952 GCLCP48506 637 aaPredicted RBP18.2■□□□□ 0.5
POLR2A-208ENST00000576952 HERVK_113P62684 666 aa18.2■□□□□ 0.5
POLR2A-208ENST00000576952 ALX1Q15699 326 aa18.2■□□□□ 0.5
POLR2A-208ENST00000576952 FAM110CQ1W6H9 321 aa18.2■□□□□ 0.5
POLR2A-208ENST00000576952 SKAP1Q86WV1 359 aa18.2■□□□□ 0.5
POLR2A-208ENST00000576952 ZNF444Q8N0Y2 327 aaPredicted RBP18.2■□□□□ 0.5
POLR2A-208ENST00000576952 RPAP3Q9H6T3 665 aaPredicted RBP18.2■□□□□ 0.5
POLR2A-208ENST00000576952 KANSL2Q9H9L4 492 aa18.2■□□□□ 0.5
POLR2A-208ENST00000576952 INCENPQ9NQS7 918 aa18.2■□□□□ 0.5
POLR2A-208ENST00000576952 TMX2Q9Y320 296 aa18.2■□□□□ 0.5
POLR2A-208ENST00000576952 PTCH2Q9Y6C5 1203 aa18.2■□□□□ 0.5
POLR2A-208ENST00000576952 USP17L15C9J2P7 530 aa18.19■□□□□ 0.5
POLR2A-208ENST00000576952 USP17L13C9JLJ4 530 aa18.19■□□□□ 0.5
POLR2A-208ENST00000576952 USP17L11C9JVI0 530 aa18.19■□□□□ 0.5
POLR2A-208ENST00000576952 USP17L18D6R9N7 530 aa18.19■□□□□ 0.5
POLR2A-208ENST00000576952 USP17L22D6RA61 530 aa18.19■□□□□ 0.5
POLR2A-208ENST00000576952 USP17L17D6RBQ6 530 aa18.19■□□□□ 0.5
POLR2A-208ENST00000576952 USP17L19D6RCP7 530 aa18.19■□□□□ 0.5
POLR2A-208ENST00000576952 USP17L20D6RJB6 530 aa18.19■□□□□ 0.5
POLR2A-208ENST00000576952 HIP1O00291 1037 aa18.19■□□□□ 0.5
POLR2A-208ENST00000576952 SLC3A2P08195 630 aaKnown RBP18.19■□□□□ 0.5
POLR2A-208ENST00000576952 PDE4BQ07343 736 aa18.19■□□□□ 0.5
POLR2A-208ENST00000576952 USP17L24Q0WX57 530 aa18.19■□□□□ 0.5
POLR2A-208ENST00000576952 CATSPERGQ6ZRH7 1159 aa18.19■□□□□ 0.5
POLR2A-208ENST00000576952 CENPQQ7L2Z9 268 aaPredicted RBP18.19■□□□□ 0.5
POLR2A-208ENST00000576952 ZNF287Q9HBT7 754 aa18.19■□□□□ 0.5
POLR2A-208ENST00000576952 TACC3Q9Y6A5 838 aa18.19■□□□□ 0.5
POLR2A-208ENST00000576952 KIAA0100Q14667 2235 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms