RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 FAM196BA6NMK8 535 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 SFI1A8K8P3 1242 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 TMEM229AB2RXF0 380 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 UBE2Q2LH0YL09 131 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 GNRH1P01148 92 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 GDF10P55107 478 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 DPYDQ12882 1025 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 KIAA0825Q8IV33 1275 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 MPHOSPH8Q99549 860 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 MCOLN1Q9GZU1 580 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 COA1Q9GZY4 146 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 MYH16Q9H6N6 1097 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 ATP13A2Q9NQ11 1180 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 NOVA2Q9UNW9 492 aaKnown RBP7.9□□□□□ -1.14
NUP88-212ENST00000576708 JAG2Q9Y219 1238 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 LEMD3Q9Y2U8 911 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 PCDHAC2Q9Y5I4 1007 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 MYH3P11055 1940 aa7.9□□□□□ -1.15
NUP88-212ENST00000576708 ZNF646O15015 1829 aaPredicted RBP7.89□□□□□ -1.15
NUP88-212ENST00000576708 IRS2Q9Y4H2 1338 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 WNT10BO00744 389 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 PLIN1O60240 522 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 LGR5O75473 907 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 TRPA1O75762 1119 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 IL2RAP01589 272 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 ZEB1P37275 1124 aaPredicted RBP7.89□□□□□ -1.15
NUP88-212ENST00000576708 CTSOP43234 321 aaPredicted RBP7.89□□□□□ -1.15
NUP88-212ENST00000576708 KCNJ4P48050 445 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 DGKZQ13574 1117 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 PRKG1Q13976 671 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 STRIP1Q5VSL9 837 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 TTLL5Q6EMB2 1281 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 LMBR1LQ6UX01 489 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 RASAL3Q86YV0 1011 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 ANKMY2Q8IV38 441 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 CERS5Q8N5B7 392 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 ZFP42Q96MM3 310 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 CSRNP1Q96S65 589 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 ANKRD2Q9GZV1 360 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 CD209Q9NNX6 404 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 POLMQ9NP87 494 aaPredicted RBP7.89□□□□□ -1.15
NUP88-212ENST00000576708 RNF186Q9NXI6 227 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 ZMIZ1Q9ULJ6 1067 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 FZD1Q9UP38 647 aa7.89□□□□□ -1.15
NUP88-212ENST00000576708 CASP8AP2Q9UKL3 1982 aa7.88□□□□□ -1.15
NUP88-212ENST00000576708 AOX1Q06278 1338 aa7.88□□□□□ -1.15
NUP88-212ENST00000576708 F8W031 263 aaPredicted RBP7.88□□□□□ -1.15
NUP88-212ENST00000576708 CA12O43570 354 aa7.88□□□□□ -1.15
NUP88-212ENST00000576708 DKK1O94907 266 aa7.88□□□□□ -1.15
NUP88-212ENST00000576708 ATG7O95352 703 aa7.88□□□□□ -1.15
NUP88-212ENST00000576708 IFIT5Q13325 482 aaKnown RBP7.88□□□□□ -1.15
NUP88-212ENST00000576708 SLC4A10Q6U841 1118 aa7.88□□□□□ -1.15
NUP88-212ENST00000576708 STK32AQ8WU08 396 aa7.88□□□□□ -1.15
NUP88-212ENST00000576708 ZNF358Q9NW07 568 aa7.88□□□□□ -1.15
NUP88-212ENST00000576708 RBM19Q9Y4C8 960 aaKnown RBP7.88□□□□□ -1.15
NUP88-212ENST00000576708 PITPNM2Q9BZ72 1349 aa7.87□□□□□ -1.15
NUP88-212ENST00000576708 CARNS1A5YM72 827 aa7.87□□□□□ -1.15
NUP88-212ENST00000576708 GRM8O00222 908 aa7.87□□□□□ -1.15
NUP88-212ENST00000576708 SPINT1O43278 529 aa7.87□□□□□ -1.15
NUP88-212ENST00000576708 INHAP05111 366 aa7.87□□□□□ -1.15
NUP88-212ENST00000576708 SIX5Q8N196 739 aa7.87□□□□□ -1.15
NUP88-212ENST00000576708 XAGE2Q96GT9 111 aa7.87□□□□□ -1.15
NUP88-212ENST00000576708 KAZALD1Q96I82 304 aa7.87□□□□□ -1.15
NUP88-212ENST00000576708 SUCLG2Q96I99 432 aa7.87□□□□□ -1.15
NUP88-212ENST00000576708 ZBED3Q96IU2 234 aaPredicted RBP7.87□□□□□ -1.15
NUP88-212ENST00000576708 PUS3Q9BZE2 481 aaKnown RBP7.87□□□□□ -1.15
NUP88-212ENST00000576708 MYO3BQ8WXR4 1341 aa7.86□□□□□ -1.15
NUP88-212ENST00000576708 FIGNL2A6NMB9 653 aa7.86□□□□□ -1.15
NUP88-212ENST00000576708 NBPF7P0C2Y1 421 aaPredicted RBP7.86□□□□□ -1.15
NUP88-212ENST00000576708 PTPN12Q05209 780 aaKnown RBP7.86□□□□□ -1.15
NUP88-212ENST00000576708 CLN3Q13286 438 aa7.86□□□□□ -1.15
NUP88-212ENST00000576708 CCDC57Q2TAC2 916 aa7.86□□□□□ -1.15
NUP88-212ENST00000576708 TAF7LQ5H9L4 462 aa7.86□□□□□ -1.15
NUP88-212ENST00000576708 LDHAL6AQ6ZMR3 332 aa7.86□□□□□ -1.15
NUP88-212ENST00000576708 TSEN2Q8NCE0 465 aaKnown RBP7.86□□□□□ -1.15
NUP88-212ENST00000576708 FAM200AQ8TCP9 573 aa7.86□□□□□ -1.15
NUP88-212ENST00000576708 ESYT1Q9BSJ8 1104 aa7.86□□□□□ -1.15
NUP88-212ENST00000576708 SRCIN1Q9C0H9 1055 aa7.86□□□□□ -1.15
NUP88-212ENST00000576708 CNNM1Q9NRU3 951 aa7.86□□□□□ -1.15
NUP88-212ENST00000576708 C9orf78Q9NZ63 289 aaPredicted RBP7.86□□□□□ -1.15
NUP88-212ENST00000576708 PAPPA2Q9BXP8 1791 aa7.86□□□□□ -1.15
NUP88-212ENST00000576708 ZNF521Q96K83 1311 aa7.85□□□□□ -1.15
NUP88-212ENST00000576708 A0A1B0GUL6 1792 aa7.85□□□□□ -1.15
NUP88-212ENST00000576708 CLRN2A0PK11 232 aa7.85□□□□□ -1.15
NUP88-212ENST00000576708 SOBPA7XYQ1 873 aa7.85□□□□□ -1.15
NUP88-212ENST00000576708 ALDH1L1O75891 902 aa7.85□□□□□ -1.15
NUP88-212ENST00000576708 TBC1D8O95759 1140 aa7.85□□□□□ -1.15
NUP88-212ENST00000576708 IL1R1P14778 569 aa7.85□□□□□ -1.15
NUP88-212ENST00000576708 GYG1P46976 350 aa7.85□□□□□ -1.15
NUP88-212ENST00000576708 SEC13P55735 322 aa7.85□□□□□ -1.15
NUP88-212ENST00000576708 FKBP1BP68106 108 aa7.85□□□□□ -1.15
NUP88-212ENST00000576708 CENPCQ03188 943 aa7.85□□□□□ -1.15
NUP88-212ENST00000576708 DLGAP5Q15398 846 aa7.85□□□□□ -1.15
NUP88-212ENST00000576708 CFAP100Q494V2 611 aa7.85□□□□□ -1.15
NUP88-212ENST00000576708 FOXD4L5Q5VV16 416 aaPredicted RBP7.85□□□□□ -1.15
NUP88-212ENST00000576708 C15orf52Q6ZUT6 534 aaKnown RBP7.85□□□□□ -1.15
NUP88-212ENST00000576708 PRMT6Q96LA8 375 aaPredicted RBP7.85□□□□□ -1.15
NUP88-212ENST00000576708 SAGE1Q9NXZ1 904 aa7.85□□□□□ -1.15
NUP88-212ENST00000576708 GMPR2Q9P2T1 348 aaKnown RBP7.85□□□□□ -1.15
NUP88-212ENST00000576708 HDAC9Q9UKV0 1011 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms