RNA–Protein interactions for RNA: ENST00000576335.5

TRAP1-216, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-216ENST00000576335 AGXT2Q9BYV1 514 aa13.17□□□□□ -0.3
TRAP1-216ENST00000576335 UPF3BQ9BZI7 483 aaKnown RBP13.17□□□□□ -0.3
TRAP1-216ENST00000576335 INCENPQ9NQS7 918 aa13.17□□□□□ -0.3
TRAP1-216ENST00000576335 CREBZFQ9NS37 354 aa13.17□□□□□ -0.3
TRAP1-216ENST00000576335 MTMR4Q9NYA4 1195 aa13.17□□□□□ -0.3
TRAP1-216ENST00000576335 NYAP2Q9P242 653 aa13.17□□□□□ -0.3
TRAP1-216ENST00000576335 ABT1Q9ULW3 272 aaKnown RBP13.17□□□□□ -0.3
TRAP1-216ENST00000576335 GREB1LQ9C091 1923 aaPredicted RBP13.16□□□□□ -0.3
TRAP1-216ENST00000576335 USP17L5A8MUK1 530 aa13.16□□□□□ -0.3
TRAP1-216ENST00000576335 SH2B2O14492 632 aaPredicted RBP13.16□□□□□ -0.3
TRAP1-216ENST00000576335 GDF11O95390 407 aa13.16□□□□□ -0.3
TRAP1-216ENST00000576335 CALM1P0DP23 149 aa13.16□□□□□ -0.3
TRAP1-216ENST00000576335 CALM2P0DP24 149 aa13.16□□□□□ -0.3
TRAP1-216ENST00000576335 CALM3P0DP25 149 aa13.16□□□□□ -0.3
TRAP1-216ENST00000576335 ANTXR2P58335 489 aa13.16□□□□□ -0.3
TRAP1-216ENST00000576335 HTRA3P83110 453 aa13.16□□□□□ -0.3
TRAP1-216ENST00000576335 RAB3GAP1Q15042 981 aa13.16□□□□□ -0.3
TRAP1-216ENST00000576335 LDLRAD1Q5T700 205 aa13.16□□□□□ -0.3
TRAP1-216ENST00000576335 SYNE3Q6ZMZ3 975 aa13.16□□□□□ -0.3
TRAP1-216ENST00000576335 SGMS1Q86VZ5 419 aa13.16□□□□□ -0.3
TRAP1-216ENST00000576335 CEP95Q96GE4 821 aa13.16□□□□□ -0.3
TRAP1-216ENST00000576335 KAT14Q9H8E8 782 aa13.16□□□□□ -0.3
TRAP1-216ENST00000576335 STX8Q9UNK0 236 aa13.16□□□□□ -0.3
TRAP1-216ENST00000576335 DOCK1Q14185 1865 aa13.16□□□□□ -0.3
TRAP1-216ENST00000576335 POLR2AP24928 1970 aaKnown RBP13.16□□□□□ -0.3
TRAP1-216ENST00000576335 CCDC69A6NI79 296 aa13.15□□□□□ -0.3
TRAP1-216ENST00000576335 TOP1P11387 765 aaKnown RBP13.15□□□□□ -0.3
TRAP1-216ENST00000576335 INPP5BP32019 993 aa13.15□□□□□ -0.3
TRAP1-216ENST00000576335 USP14P54578 494 aa13.15□□□□□ -0.3
TRAP1-216ENST00000576335 PPATQ06203 517 aa13.15□□□□□ -0.3
TRAP1-216ENST00000576335 VGLL4Q14135 290 aa13.15□□□□□ -0.3
TRAP1-216ENST00000576335 SEPT2Q15019 361 aa13.15□□□□□ -0.3
TRAP1-216ENST00000576335 PPP2R5BQ15173 497 aa13.15□□□□□ -0.3
TRAP1-216ENST00000576335 SEC23AQ15436 765 aa13.15□□□□□ -0.3
TRAP1-216ENST00000576335 NFXL1Q6ZNB6 911 aa13.15□□□□□ -0.3
TRAP1-216ENST00000576335 Q6ZUG5 572 aa13.15□□□□□ -0.3
TRAP1-216ENST00000576335 PAXIP1Q6ZW49 1069 aaPredicted RBP13.15□□□□□ -0.3
TRAP1-216ENST00000576335 ERO1BQ86YB8 467 aa13.15□□□□□ -0.3
TRAP1-216ENST00000576335 ENAHQ8N8S7 591 aaPredicted RBP13.15□□□□□ -0.3
TRAP1-216ENST00000576335 IGDCC4Q8TDY8 1250 aa13.15□□□□□ -0.3
TRAP1-216ENST00000576335 MKL1Q969V6 931 aa13.15□□□□□ -0.3
TRAP1-216ENST00000576335 WDR18Q9BV38 432 aa13.15□□□□□ -0.3
TRAP1-216ENST00000576335 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAP1-216ENST00000576335 LY9Q9HBG7 655 aa13.15□□□□□ -0.3
TRAP1-216ENST00000576335 IL17RBQ9NRM6 502 aa13.15□□□□□ -0.3
TRAP1-216ENST00000576335 DDAH1O94760 285 aa13.14□□□□□ -0.31
TRAP1-216ENST00000576335 PTPRAP18433 802 aa13.14□□□□□ -0.31
TRAP1-216ENST00000576335 EVCP57679 992 aa13.14□□□□□ -0.31
TRAP1-216ENST00000576335 FMR1Q06787 632 aaKnown RBP eCLIP13.14□□□□□ -0.318e-7■■□□□ 12.5
TRAP1-216ENST00000576335 PRKG1Q13976 671 aa13.14□□□□□ -0.31
TRAP1-216ENST00000576335 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.14□□□□□ -0.31
TRAP1-216ENST00000576335 CATIPQ7Z7H3 387 aa13.14□□□□□ -0.31
TRAP1-216ENST00000576335 ZKSCAN4Q969J2 545 aaPredicted RBP13.14□□□□□ -0.31
TRAP1-216ENST00000576335 SNX21Q969T3 373 aa13.14□□□□□ -0.31
TRAP1-216ENST00000576335 HHIPL1Q96JK4 782 aa13.14□□□□□ -0.31
TRAP1-216ENST00000576335 ZSCAN31Q96LW9 406 aaPredicted RBP13.14□□□□□ -0.31
TRAP1-216ENST00000576335 MAP3K14Q99558 947 aa13.14□□□□□ -0.31
TRAP1-216ENST00000576335 GOPCQ9HD26 462 aa13.14□□□□□ -0.31
TRAP1-216ENST00000576335 SLC12A7Q9Y666 1083 aa13.14□□□□□ -0.31
TRAP1-216ENST00000576335 SNCAIPQ9Y6H5 919 aa13.14□□□□□ -0.31
TRAP1-216ENST00000576335 TRPM7Q96QT4 1865 aa13.14□□□□□ -0.31
TRAP1-216ENST00000576335 SPDYE5A6NIY4 337 aa13.13□□□□□ -0.31
TRAP1-216ENST00000576335 C19orf81C9J6K1 198 aa13.13□□□□□ -0.31
TRAP1-216ENST00000576335 GUCY1A2P33402 732 aa13.13□□□□□ -0.31
TRAP1-216ENST00000576335 ANP32AP39687 249 aaKnown RBP13.13□□□□□ -0.31
TRAP1-216ENST00000576335 AK2P54819 239 aa13.13□□□□□ -0.31
TRAP1-216ENST00000576335 RRP1BQ14684 758 aaKnown RBP13.13□□□□□ -0.31
TRAP1-216ENST00000576335 CHST3Q7LGC8 479 aa13.13□□□□□ -0.31
TRAP1-216ENST00000576335 ZNF280CQ8ND82 737 aa13.13□□□□□ -0.31
TRAP1-216ENST00000576335 GMCL1P1Q8NEA9 526 aa13.13□□□□□ -0.31
TRAP1-216ENST00000576335 LPAR1Q92633 364 aa13.13□□□□□ -0.31
TRAP1-216ENST00000576335 BRF1Q92994 677 aa13.13□□□□□ -0.31
TRAP1-216ENST00000576335 ZNF274Q96GC6 653 aaPredicted RBP13.13□□□□□ -0.31
TRAP1-216ENST00000576335 ZKSCAN3Q9BRR0 538 aa13.13□□□□□ -0.31
TRAP1-216ENST00000576335 SH2B1Q9NRF2 756 aaPredicted RBP13.13□□□□□ -0.31
TRAP1-216ENST00000576335 CLIP2Q9UDT6 1046 aa13.13□□□□□ -0.31
TRAP1-216ENST00000576335 LIMCH1Q9UPQ0 1083 aa13.13□□□□□ -0.31
TRAP1-216ENST00000576335 TMX2Q9Y320 296 aa13.13□□□□□ -0.31
TRAP1-216ENST00000576335 NID2Q14112 1375 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 ATAD5Q96QE3 1844 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 CCDC196A0A1B0GTZ2 297 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 USP17L10C9JJH3 530 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 CXCL11O14625 94 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 DHX16O60231 1041 aaKnown RBP13.12□□□□□ -0.31
TRAP1-216ENST00000576335 NMT2O60551 498 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 SLURP2P0DP57 97 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 ZBTB48P10074 688 aaPredicted RBP13.12□□□□□ -0.31
TRAP1-216ENST00000576335 EEF2P13639 858 aaKnown RBP13.12□□□□□ -0.31
TRAP1-216ENST00000576335 CPA1P15085 419 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 PPIL2Q13356 520 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 TOB2Q14106 344 aaPredicted RBP13.12□□□□□ -0.31
TRAP1-216ENST00000576335 BECN1Q14457 450 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 CST9Q5W186 159 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 RCSD1Q6JBY9 416 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 DLK2Q6UY11 383 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 HSCBQ8IWL3 235 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 PNMA1Q8ND90 353 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 SLC10A4Q96EP9 437 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 FEZ1Q99689 392 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 TMEM47Q9BQJ4 181 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms