RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 DDRGK1Q96HY6 314 aa9.41□□□□□ -0.9
CCDC40-215ENST00000576033 NACAP1Q9BZK3 213 aa9.41□□□□□ -0.9
CCDC40-215ENST00000576033 MANSC4A6NHS7 340 aaPredicted RBP9.4□□□□□ -0.9
CCDC40-215ENST00000576033 USP17L5A8MUK1 530 aa9.4□□□□□ -0.9
CCDC40-215ENST00000576033 HIP1O00291 1037 aa9.4□□□□□ -0.9
CCDC40-215ENST00000576033 CDC45O75419 566 aa9.4□□□□□ -0.9
CCDC40-215ENST00000576033 TM4SF4P48230 202 aa9.4□□□□□ -0.9
CCDC40-215ENST00000576033 LBX1P52954 281 aa9.4□□□□□ -0.9
CCDC40-215ENST00000576033 ATP2B2Q01814 1243 aa9.4□□□□□ -0.9
CCDC40-215ENST00000576033 SNAPC2Q13487 334 aa9.4□□□□□ -0.9
CCDC40-215ENST00000576033 POTEEQ6S8J3 1075 aa9.4□□□□□ -0.9
CCDC40-215ENST00000576033 AMOTL1Q8IY63 956 aa9.4□□□□□ -0.9
CCDC40-215ENST00000576033 SPICE1Q8N0Z3 855 aa9.4□□□□□ -0.9
CCDC40-215ENST00000576033 ZNF280CQ8ND82 737 aa9.4□□□□□ -0.9
CCDC40-215ENST00000576033 CEP95Q96GE4 821 aa9.4□□□□□ -0.9
CCDC40-215ENST00000576033 ZKSCAN3Q9BRR0 538 aa9.4□□□□□ -0.9
CCDC40-215ENST00000576033 DSCC1Q9BVC3 393 aa9.4□□□□□ -0.9
CCDC40-215ENST00000576033 EMILIN3Q9NT22 766 aa9.4□□□□□ -0.9
CCDC40-215ENST00000576033 SWAP70Q9UH65 585 aa9.4□□□□□ -0.9
CCDC40-215ENST00000576033 RBM8AQ9Y5S9 174 aaKnown RBP9.4□□□□□ -0.9
CCDC40-215ENST00000576033 MGAMO43451 1857 aa9.4□□□□□ -0.91
CCDC40-215ENST00000576033 PLIN4Q96Q06 1357 aa9.39□□□□□ -0.91
CCDC40-215ENST00000576033 ADGRA2Q96PE1 1338 aa9.39□□□□□ -0.91
CCDC40-215ENST00000576033 IGKV6D-41A0A0C4DH26 115 aa9.39□□□□□ -0.91
CCDC40-215ENST00000576033 TESPA1A2RU30 521 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-215ENST00000576033 PDHXO00330 501 aa9.39□□□□□ -0.91
CCDC40-215ENST00000576033 ASNSP08243 561 aa9.39□□□□□ -0.91
CCDC40-215ENST00000576033 CYP21A2P08686 494 aa9.39□□□□□ -0.91
CCDC40-215ENST00000576033 EEF2P13639 858 aaKnown RBP9.39□□□□□ -0.91
CCDC40-215ENST00000576033 GTF2A2P52657 109 aa9.39□□□□□ -0.91
CCDC40-215ENST00000576033 ICA1Q05084 483 aa9.39□□□□□ -0.91
CCDC40-215ENST00000576033 SREBF2Q12772 1141 aa9.39□□□□□ -0.91
CCDC40-215ENST00000576033 ALX1Q15699 326 aa9.39□□□□□ -0.91
CCDC40-215ENST00000576033 NUP88Q99567 741 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-215ENST00000576033 FEZ1Q99689 392 aa9.39□□□□□ -0.91
CCDC40-215ENST00000576033 MKNK2Q9HBH9 465 aa9.39□□□□□ -0.91
CCDC40-215ENST00000576033 ANO2Q9NQ90 1003 aa9.39□□□□□ -0.91
CCDC40-215ENST00000576033 IL17RBQ9NRM6 502 aa9.39□□□□□ -0.91
CCDC40-215ENST00000576033 TOMM22Q9NS69 142 aa9.39□□□□□ -0.91
CCDC40-215ENST00000576033 ANAPC4Q9UJX5 808 aa9.39□□□□□ -0.91
CCDC40-215ENST00000576033 UNCXA6NJT0 531 aa9.38□□□□□ -0.91
CCDC40-215ENST00000576033 B4E1Z4 1266 aa9.38□□□□□ -0.91
CCDC40-215ENST00000576033 RANBP6O60518 1105 aaKnown RBP9.38□□□□□ -0.91
CCDC40-215ENST00000576033 CETPP11597 493 aa9.38□□□□□ -0.91
CCDC40-215ENST00000576033 TAL1P17542 331 aaPredicted RBP9.38□□□□□ -0.91
CCDC40-215ENST00000576033 VCAM1P19320 739 aa9.38□□□□□ -0.91
CCDC40-215ENST00000576033 CTGFP29279 349 aa9.38□□□□□ -0.91
CCDC40-215ENST00000576033 BACE1P56817 501 aa9.38□□□□□ -0.91
CCDC40-215ENST00000576033 TFAP4Q01664 338 aa9.38□□□□□ -0.91
CCDC40-215ENST00000576033 MAP2K1Q02750 393 aaPredicted RBP9.38□□□□□ -0.91
CCDC40-215ENST00000576033 TMEM179Q6ZVK1 233 aa9.38□□□□□ -0.91
CCDC40-215ENST00000576033 CYB5R4Q7L1T6 521 aa9.38□□□□□ -0.91
CCDC40-215ENST00000576033 CHST3Q7LGC8 479 aa9.38□□□□□ -0.91
CCDC40-215ENST00000576033 STAG1Q8WVM7 1258 aa9.38□□□□□ -0.91
CCDC40-215ENST00000576033 WDR18Q9BV38 432 aa9.38□□□□□ -0.91
CCDC40-215ENST00000576033 ARHGAP39Q9C0H5 1083 aa9.38□□□□□ -0.91
CCDC40-215ENST00000576033 SENP2Q9HC62 589 aa9.38□□□□□ -0.91
CCDC40-215ENST00000576033 CPA4Q9UI42 421 aa9.38□□□□□ -0.91
CCDC40-215ENST00000576033 MTMR7Q9Y216 660 aa9.38□□□□□ -0.91
CCDC40-215ENST00000576033 PLXNB2O15031 1838 aa9.38□□□□□ -0.91
CCDC40-215ENST00000576033 CXCL11O14625 94 aa9.37□□□□□ -0.91
CCDC40-215ENST00000576033 SLC27A2O14975 620 aa9.37□□□□□ -0.91
CCDC40-215ENST00000576033 RAD21O60216 631 aa9.37□□□□□ -0.91
CCDC40-215ENST00000576033 SEC24BO95487 1268 aa9.37□□□□□ -0.91
CCDC40-215ENST00000576033 TSPY3P0CV98 308 aa9.37□□□□□ -0.91
CCDC40-215ENST00000576033 TSPY8P0CW00 308 aa9.37□□□□□ -0.91
CCDC40-215ENST00000576033 MFAP1P55081 439 aaKnown RBP9.37□□□□□ -0.91
CCDC40-215ENST00000576033 TAF1CQ15572 869 aaPredicted RBP9.37□□□□□ -0.91
CCDC40-215ENST00000576033 SH3D19Q5HYK7 790 aa9.37□□□□□ -0.91
CCDC40-215ENST00000576033 AKNAD1Q5T1N1 836 aa9.37□□□□□ -0.91
CCDC40-215ENST00000576033 SAMD1Q6SPF0 538 aaPredicted RBP9.37□□□□□ -0.91
CCDC40-215ENST00000576033 RUFY2Q8WXA3 655 aa9.37□□□□□ -0.91
CCDC40-215ENST00000576033 MAP4K1Q92918 833 aa9.37□□□□□ -0.91
CCDC40-215ENST00000576033 CABP5Q9NP86 173 aa9.37□□□□□ -0.91
CCDC40-215ENST00000576033 GPHNQ9NQX3 736 aaPredicted RBP9.37□□□□□ -0.91
CCDC40-215ENST00000576033 AGTPBP1Q9UPW5 1226 aa9.37□□□□□ -0.91
CCDC40-215ENST00000576033 TSPY2A6NKD2 308 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 USP17L10C9JJH3 530 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 E7EWF7 191 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 ZNF213O14771 459 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 ORC4O43929 436 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 KDM4AO75164 1064 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 FGRP09769 529 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 CPA1P15085 419 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 ANTXR2P58335 489 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 PDE4BQ07343 736 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 CREB3L3Q68CJ9 461 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 ANKRD23Q86SG2 305 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 TICAM2Q86XR7 235 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 RASEFQ8IZ41 740 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 ZNF444Q8N0Y2 327 aaPredicted RBP9.36□□□□□ -0.91
CCDC40-215ENST00000576033 ZNF296Q8WUU4 475 aaPredicted RBP9.36□□□□□ -0.91
CCDC40-215ENST00000576033 KIAA1683Q9H0B3 1180 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 ASCC2Q9H1I8 757 aaPredicted RBP9.36□□□□□ -0.91
CCDC40-215ENST00000576033 RPAP3Q9H6T3 665 aaPredicted RBP9.36□□□□□ -0.91
CCDC40-215ENST00000576033 AS3MTQ9HBK9 375 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 FBXO28Q9NVF7 368 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 MTMR4Q9NYA4 1195 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 CLIP2Q9UDT6 1046 aa9.36□□□□□ -0.91
CCDC40-215ENST00000576033 CA12O43570 354 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms