RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SH3RF1Q7Z6J0 888 aa20.05■□□□□ 0.8
CTDNEP1-211ENST00000575783 FAM9BQ8IZU0 186 aa20.05■□□□□ 0.8
CTDNEP1-211ENST00000575783 GINM1Q9NU53 330 aa20.05■□□□□ 0.8
CTDNEP1-211ENST00000575783 TNFRSF10AO00220 468 aa20.04■□□□□ 0.8
CTDNEP1-211ENST00000575783 TJAP1Q5JTD0 557 aa20.04■□□□□ 0.8
CTDNEP1-211ENST00000575783 FEZ1Q99689 392 aa20.04■□□□□ 0.8
CTDNEP1-211ENST00000575783 SAP30BPQ9UHR5 308 aaKnown RBP20.04■□□□□ 0.8
CTDNEP1-211ENST00000575783 RAPGEFL1Q9UHV5 662 aa20.04■□□□□ 0.8
CTDNEP1-211ENST00000575783 HDAC5Q9UQL6 1122 aa20.04■□□□□ 0.8
CTDNEP1-211ENST00000575783 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.04■□□□□ 0.8
CTDNEP1-211ENST00000575783 TRIM43BA6NCK2 446 aa20.03■□□□□ 0.8
CTDNEP1-211ENST00000575783 GH2P01242 217 aa20.03■□□□□ 0.8
CTDNEP1-211ENST00000575783 HOXC6P09630 235 aa20.03■□□□□ 0.8
CTDNEP1-211ENST00000575783 NAA16Q6N069 864 aaPredicted RBP20.03■□□□□ 0.8
CTDNEP1-211ENST00000575783 METTL16Q86W50 562 aaKnown RBP20.03■□□□□ 0.8
CTDNEP1-211ENST00000575783 FERMT2Q96AC1 680 aa20.03■□□□□ 0.8
CTDNEP1-211ENST00000575783 TRIM43Q96BQ3 446 aaPredicted RBP20.03■□□□□ 0.8
CTDNEP1-211ENST00000575783 PDLIM7Q9NR12 457 aa20.03■□□□□ 0.8
CTDNEP1-211ENST00000575783 FLT1P17948 1338 aa20.02■□□□□ 0.8
CTDNEP1-211ENST00000575783 CYBAP13498 195 aa20.02■□□□□ 0.8
CTDNEP1-211ENST00000575783 PLCG2P16885 1265 aa20.02■□□□□ 0.8
CTDNEP1-211ENST00000575783 ADCYAP1R1P41586 468 aa20.02■□□□□ 0.8
CTDNEP1-211ENST00000575783 GRB14Q14449 540 aa20.02■□□□□ 0.8
CTDNEP1-211ENST00000575783 CATSPERGQ6ZRH7 1159 aa20.02■□□□□ 0.8
CTDNEP1-211ENST00000575783 DPP9Q86TI2 863 aa20.02■□□□□ 0.8
CTDNEP1-211ENST00000575783 USP38Q8NB14 1042 aa20.02■□□□□ 0.8
CTDNEP1-211ENST00000575783 RNPC3Q96LT9 517 aaKnown RBP20.02■□□□□ 0.8
CTDNEP1-211ENST00000575783 SMC4Q9NTJ3 1288 aa20.02■□□□□ 0.8
CTDNEP1-211ENST00000575783 BTBD7Q9P203 1132 aa20.02■□□□□ 0.8
CTDNEP1-211ENST00000575783 ATAD5Q96QE3 1844 aa20.02■□□□□ 0.79
CTDNEP1-211ENST00000575783 SRGAP3O43295 1099 aa20.01■□□□□ 0.79
CTDNEP1-211ENST00000575783 GRIN2CQ14957 1233 aa20.01■□□□□ 0.79
CTDNEP1-211ENST00000575783 SNRKQ9NRH2 765 aa20.01■□□□□ 0.79
CTDNEP1-211ENST00000575783 HLA-DOAP06340 250 aa20■□□□□ 0.79
CTDNEP1-211ENST00000575783 ARID4AP29374 1257 aaPredicted RBP20■□□□□ 0.79
CTDNEP1-211ENST00000575783 MCAMP43121 646 aa20■□□□□ 0.79
CTDNEP1-211ENST00000575783 MAST2Q6P0Q8 1798 aa20■□□□□ 0.79
CTDNEP1-211ENST00000575783 EPHB4P54760 987 aa19.99■□□□□ 0.79
CTDNEP1-211ENST00000575783 PPP4CP60510 307 aa19.99■□□□□ 0.79
CTDNEP1-211ENST00000575783 TLE2Q04725 743 aa19.99■□□□□ 0.79
CTDNEP1-211ENST00000575783 RAB3GAP1Q15042 981 aa19.99■□□□□ 0.79
CTDNEP1-211ENST00000575783 ATF7IPQ6VMQ6 1270 aa19.99■□□□□ 0.79
CTDNEP1-211ENST00000575783 C12orf42Q96LP6 360 aa19.99■□□□□ 0.79
CTDNEP1-211ENST00000575783 MEIS3Q99687 375 aa19.99■□□□□ 0.79
CTDNEP1-211ENST00000575783 TMEM265A0A087WTH1 108 aa19.98■□□□□ 0.79
CTDNEP1-211ENST00000575783 SEPT4O43236 478 aa19.98■□□□□ 0.79
CTDNEP1-211ENST00000575783 VCAM1P19320 739 aa19.98■□□□□ 0.79
CTDNEP1-211ENST00000575783 ITGB8P26012 769 aa19.98■□□□□ 0.79
CTDNEP1-211ENST00000575783 USP14P54578 494 aa19.98■□□□□ 0.79
CTDNEP1-211ENST00000575783 SNX17Q15036 470 aa19.98■□□□□ 0.79
CTDNEP1-211ENST00000575783 ALDH1L2Q3SY69 923 aa19.98■□□□□ 0.79
CTDNEP1-211ENST00000575783 PRAMEF19Q5SWL8 479 aa19.98■□□□□ 0.79
CTDNEP1-211ENST00000575783 ADGRA1Q86SQ6 560 aa19.98■□□□□ 0.79
CTDNEP1-211ENST00000575783 PPM1EQ8WY54 764 aa19.98■□□□□ 0.79
CTDNEP1-211ENST00000575783 NOB1Q9ULX3 412 aaKnown RBP19.98■□□□□ 0.79
CTDNEP1-211ENST00000575783 ZNF521Q96K83 1311 aa19.98■□□□□ 0.79
CTDNEP1-211ENST00000575783 IGHA2P01877 340 aa19.97■□□□□ 0.79
CTDNEP1-211ENST00000575783 UQCRFS1P1P0C7P4 283 aa19.97■□□□□ 0.79
CTDNEP1-211ENST00000575783 ADORA2AP29274 412 aa19.97■□□□□ 0.79
CTDNEP1-211ENST00000575783 LRRC41Q15345 812 aa19.97■□□□□ 0.79
CTDNEP1-211ENST00000575783 OLFML2BQ68BL8 750 aa19.97■□□□□ 0.79
CTDNEP1-211ENST00000575783 ACER1Q8TDN7 264 aa19.97■□□□□ 0.79
CTDNEP1-211ENST00000575783 TACC3Q9Y6A5 838 aa19.97■□□□□ 0.79
CTDNEP1-211ENST00000575783 SPDYE16A6NNV3 312 aaPredicted RBP19.96■□□□□ 0.79
CTDNEP1-211ENST00000575783 LBX2Q6XYB7 198 aa19.96■□□□□ 0.79
CTDNEP1-211ENST00000575783 KIAA1683Q9H0B3 1180 aa19.96■□□□□ 0.79
CTDNEP1-211ENST00000575783 RPAP3Q9H6T3 665 aaPredicted RBP19.96■□□□□ 0.79
CTDNEP1-211ENST00000575783 LTBP2Q14767 1821 aa19.95■□□□□ 0.78
CTDNEP1-211ENST00000575783 E9PSI1 815 aa19.95■□□□□ 0.78
CTDNEP1-211ENST00000575783 ANP32CO43423 234 aa19.95■□□□□ 0.78
CTDNEP1-211ENST00000575783 RAG1P15918 1043 aa19.95■□□□□ 0.78
CTDNEP1-211ENST00000575783 DNAJB2P25686 324 aa19.95■□□□□ 0.78
CTDNEP1-211ENST00000575783 DYNLL1P63167 89 aaKnown RBP19.95■□□□□ 0.78
CTDNEP1-211ENST00000575783 MOV10L1Q9BXT6 1211 aaKnown RBP19.95■□□□□ 0.78
CTDNEP1-211ENST00000575783 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.94■□□□□ 0.78
CTDNEP1-211ENST00000575783 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.94■□□□□ 0.78
CTDNEP1-211ENST00000575783 STRNO43815 780 aa19.94■□□□□ 0.78
CTDNEP1-211ENST00000575783 COBLO75128 1261 aa19.94■□□□□ 0.78
CTDNEP1-211ENST00000575783 CLTBP09497 229 aa19.94■□□□□ 0.78
CTDNEP1-211ENST00000575783 FAM47AQ5JRC9 791 aa19.94■□□□□ 0.78
CTDNEP1-211ENST00000575783 C1orf53Q5VUE5 145 aa19.94■□□□□ 0.78
CTDNEP1-211ENST00000575783 TATDN1Q6P1N9 297 aa19.94■□□□□ 0.78
CTDNEP1-211ENST00000575783 ZNF576Q9H609 170 aa19.94■□□□□ 0.78
CTDNEP1-211ENST00000575783 FRMPD3Q5JV73 1810 aa19.93■□□□□ 0.78
CTDNEP1-211ENST00000575783 PQBP1O60828 265 aaKnown RBP19.93■□□□□ 0.78
CTDNEP1-211ENST00000575783 FPGSQ05932 587 aa19.93■□□□□ 0.78
CTDNEP1-211ENST00000575783 G3BP1Q13283 466 aaKnown RBP eCLIP19.93■□□□□ 0.78
CTDNEP1-211ENST00000575783 ABCB5Q2M3G0 1257 aa19.93■□□□□ 0.78
CTDNEP1-211ENST00000575783 CERKLQ49MI3 558 aaPredicted RBP19.93■□□□□ 0.78
CTDNEP1-211ENST00000575783 TTC39AQ5SRH9 613 aa19.93■□□□□ 0.78
CTDNEP1-211ENST00000575783 API5Q9BZZ5 524 aaKnown RBP19.93■□□□□ 0.78
CTDNEP1-211ENST00000575783 SLC5A4Q9NY91 659 aa19.93■□□□□ 0.78
CTDNEP1-211ENST00000575783 SIPA1L1O43166 1804 aa19.92■□□□□ 0.78
CTDNEP1-211ENST00000575783 ERCC3P19447 782 aa19.92■□□□□ 0.78
CTDNEP1-211ENST00000575783 TIFAQ96CG3 184 aa19.92■□□□□ 0.78
CTDNEP1-211ENST00000575783 CABP5Q9NP86 173 aa19.92■□□□□ 0.78
CTDNEP1-211ENST00000575783 TMEM39AQ9NV64 488 aa19.92■□□□□ 0.78
CTDNEP1-211ENST00000575783 HOXC10Q9NYD6 342 aa19.92■□□□□ 0.78
CTDNEP1-211ENST00000575783 SERPINB13Q9UIV8 391 aa19.92■□□□□ 0.78
CTDNEP1-211ENST00000575783 KIAA0355O15063 1070 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms