RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 CCDC17Q96LX7 622 aa14.39□□□□□ -0.11
USP43-206ENST00000575346 P2RX7Q99572 595 aaKnown RBP14.39□□□□□ -0.11
USP43-206ENST00000575346 ARPP21Q9UBL0 812 aaPredicted RBP14.39□□□□□ -0.11
USP43-206ENST00000575346 STAP2Q9UGK3 403 aa14.39□□□□□ -0.11
USP43-206ENST00000575346 MYH8P13535 1937 aa14.39□□□□□ -0.11
USP43-206ENST00000575346 GSG1L2A8MUP6 293 aa14.38□□□□□ -0.11
USP43-206ENST00000575346 TNPO2O14787 897 aaKnown RBP14.38□□□□□ -0.11
USP43-206ENST00000575346 GNAT2P19087 354 aa14.38□□□□□ -0.11
USP43-206ENST00000575346 GRK4P32298 578 aa14.38□□□□□ -0.11
USP43-206ENST00000575346 HERVK_113P62684 666 aa14.38□□□□□ -0.11
USP43-206ENST00000575346 SEPT2Q15019 361 aa14.38□□□□□ -0.11
USP43-206ENST00000575346 TMEM179Q6ZVK1 233 aa14.38□□□□□ -0.11
USP43-206ENST00000575346 SMC5Q8IY18 1101 aa14.38□□□□□ -0.11
USP43-206ENST00000575346 SLC44A5Q8NCS7 719 aa14.38□□□□□ -0.11
USP43-206ENST00000575346 RAET1EQ8TD07 263 aa14.38□□□□□ -0.11
USP43-206ENST00000575346 ACER1Q8TDN7 264 aa14.38□□□□□ -0.11
USP43-206ENST00000575346 PXYLP1Q8TE99 480 aa14.38□□□□□ -0.11
USP43-206ENST00000575346 SH3TC2Q8TF17 1288 aa14.38□□□□□ -0.11
USP43-206ENST00000575346 DYNLL2Q96FJ2 89 aa14.38□□□□□ -0.11
USP43-206ENST00000575346 TMEM106CQ9BVX2 250 aa14.38□□□□□ -0.11
USP43-206ENST00000575346 GABRQQ9UN88 632 aa14.38□□□□□ -0.11
USP43-206ENST00000575346 USP17L15C9J2P7 530 aa14.37□□□□□ -0.11
USP43-206ENST00000575346 USP17L13C9JLJ4 530 aa14.37□□□□□ -0.11
USP43-206ENST00000575346 USP17L11C9JVI0 530 aa14.37□□□□□ -0.11
USP43-206ENST00000575346 USP17L18D6R9N7 530 aa14.37□□□□□ -0.11
USP43-206ENST00000575346 USP17L22D6RA61 530 aa14.37□□□□□ -0.11
USP43-206ENST00000575346 USP17L17D6RBQ6 530 aa14.37□□□□□ -0.11
USP43-206ENST00000575346 USP17L19D6RCP7 530 aa14.37□□□□□ -0.11
USP43-206ENST00000575346 USP17L20D6RJB6 530 aa14.37□□□□□ -0.11
USP43-206ENST00000575346 GPAA1O43292 621 aa14.37□□□□□ -0.11
USP43-206ENST00000575346 ECM2O94769 699 aaPredicted RBP14.37□□□□□ -0.11
USP43-206ENST00000575346 CDK8P49336 464 aa14.37□□□□□ -0.11
USP43-206ENST00000575346 FLT3LGP49771 235 aa14.37□□□□□ -0.11
USP43-206ENST00000575346 USP17L24Q0WX57 530 aa14.37□□□□□ -0.11
USP43-206ENST00000575346 LBX2Q6XYB7 198 aa14.37□□□□□ -0.11
USP43-206ENST00000575346 CATSPERGQ6ZRH7 1159 aa14.37□□□□□ -0.11
USP43-206ENST00000575346 SLAIN1Q8ND83 568 aa14.37□□□□□ -0.11
USP43-206ENST00000575346 COA7Q96BR5 231 aa14.37□□□□□ -0.11
USP43-206ENST00000575346 FEZ1Q99689 392 aa14.37□□□□□ -0.11
USP43-206ENST00000575346 ZBTB47Q9UFB7 747 aaPredicted RBP14.37□□□□□ -0.11
USP43-206ENST00000575346 ROBO3Q96MS0 1386 aa14.36□□□□□ -0.11
USP43-206ENST00000575346 DOCK3Q8IZD9 2030 aa14.36□□□□□ -0.11
USP43-206ENST00000575346 CYP2D7A0A087X1C5 515 aa14.36□□□□□ -0.11
USP43-206ENST00000575346 A0A1W2PRG0 241 aa14.36□□□□□ -0.11
USP43-206ENST00000575346 SMIM22K7EJ46 135 aa14.36□□□□□ -0.11
USP43-206ENST00000575346 VCAM1P19320 739 aa14.36□□□□□ -0.11
USP43-206ENST00000575346 PDE1AP54750 535 aa14.36□□□□□ -0.11
USP43-206ENST00000575346 POTEEQ6S8J3 1075 aa14.36□□□□□ -0.11
USP43-206ENST00000575346 TICAM2Q86XR7 235 aa14.36□□□□□ -0.11
USP43-206ENST00000575346 SIAH1Q8IUQ4 282 aa14.36□□□□□ -0.11
USP43-206ENST00000575346 GPRC5AQ8NFJ5 357 aa14.36□□□□□ -0.11
USP43-206ENST00000575346 RWDD1Q9H446 243 aaPredicted RBP14.36□□□□□ -0.11
USP43-206ENST00000575346 TXNRD2Q9NNW7 524 aa14.36□□□□□ -0.11
USP43-206ENST00000575346 RBPJLQ9UBG7 517 aa14.36□□□□□ -0.11
USP43-206ENST00000575346 GREB1LQ9C091 1923 aaPredicted RBP14.35□□□□□ -0.11
USP43-206ENST00000575346 PATL2C9JE40 543 aaKnown RBP14.35□□□□□ -0.11
USP43-206ENST00000575346 M0R2C6 588 aa14.35□□□□□ -0.11
USP43-206ENST00000575346 MPHOSPH10O00566 681 aaKnown RBP14.35□□□□□ -0.11
USP43-206ENST00000575346 AKR1B1P15121 316 aa14.35□□□□□ -0.11
USP43-206ENST00000575346 ZMYM1Q5SVZ6 1142 aa14.35□□□□□ -0.11
USP43-206ENST00000575346 EXOC6Q8TAG9 804 aa14.35□□□□□ -0.11
USP43-206ENST00000575346 FSD1Q9BTV5 496 aa14.35□□□□□ -0.11
USP43-206ENST00000575346 EPB41L4AQ9HCS5 686 aaPredicted RBP14.35□□□□□ -0.11
USP43-206ENST00000575346 GJD2Q9UKL4 321 aa14.35□□□□□ -0.11
USP43-206ENST00000575346 TMX2Q9Y320 296 aa14.35□□□□□ -0.11
USP43-206ENST00000575346 KIAA0100Q14667 2235 aaKnown RBP14.35□□□□□ -0.11
USP43-206ENST00000575346 PLXNB2O15031 1838 aa14.34□□□□□ -0.11
USP43-206ENST00000575346 ADCY3O60266 1144 aa14.34□□□□□ -0.11
USP43-206ENST00000575346 EN2P19622 333 aaPredicted RBP14.34□□□□□ -0.11
USP43-206ENST00000575346 ERVK-9P63128 1117 aa14.34□□□□□ -0.11
USP43-206ENST00000575346 ERVK-24P63145 666 aa14.34□□□□□ -0.11
USP43-206ENST00000575346 UBXN2AP68543 259 aa14.34□□□□□ -0.11
USP43-206ENST00000575346 MTFR1Q15390 333 aa14.34□□□□□ -0.11
USP43-206ENST00000575346 ZYXQ15942 572 aaKnown RBP14.34□□□□□ -0.11
USP43-206ENST00000575346 Q3C1V9 767 aa14.34□□□□□ -0.11
USP43-206ENST00000575346 LPAR1Q92633 364 aa14.34□□□□□ -0.11
USP43-206ENST00000575346 EVI5LQ96CN4 794 aa14.34□□□□□ -0.11
USP43-206ENST00000575346 RABGAP1Q9Y3P9 1069 aa14.34□□□□□ -0.11
USP43-206ENST00000575346 CENPFP49454 3210 aa14.34□□□□□ -0.11
USP43-206ENST00000575346 CNMDO75829 334 aa14.33□□□□□ -0.12
USP43-206ENST00000575346 IGHDP01880 384 aa14.33□□□□□ -0.12
USP43-206ENST00000575346 MAPK4P31152 587 aa14.33□□□□□ -0.12
USP43-206ENST00000575346 ICA1Q05084 483 aa14.33□□□□□ -0.12
USP43-206ENST00000575346 IFNL3Q8IZI9 196 aa14.33□□□□□ -0.12
USP43-206ENST00000575346 SEC62Q99442 399 aaKnown RBP14.33□□□□□ -0.12
USP43-206ENST00000575346 RPAP3Q9H6T3 665 aaPredicted RBP14.33□□□□□ -0.12
USP43-206ENST00000575346 SH2D4AQ9H788 454 aa14.33□□□□□ -0.12
USP43-206ENST00000575346 KANSL2Q9H9L4 492 aa14.33□□□□□ -0.12
USP43-206ENST00000575346 ARHGEF10LQ9HCE6 1279 aa14.33□□□□□ -0.12
USP43-206ENST00000575346 RLFQ13129 1914 aa14.33□□□□□ -0.12
USP43-206ENST00000575346 GJB1P08034 283 aa14.32□□□□□ -0.12
USP43-206ENST00000575346 CAPN2P17655 700 aa14.32□□□□□ -0.12
USP43-206ENST00000575346 RASA1P20936 1047 aa14.32□□□□□ -0.12
USP43-206ENST00000575346 NKX2-3Q8TAU0 364 aa14.32□□□□□ -0.12
USP43-206ENST00000575346 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.32□□□□□ -0.12
USP43-206ENST00000575346 LNPKQ9C0E8 428 aa14.32□□□□□ -0.12
USP43-206ENST00000575346 OSBPL3Q9H4L5 887 aa14.32□□□□□ -0.12
USP43-206ENST00000575346 VCPKMTQ9H867 229 aa14.32□□□□□ -0.12
USP43-206ENST00000575346 SUPT16HQ9Y5B9 1047 aaKnown RBP14.32□□□□□ -0.12
USP43-206ENST00000575346 SPDYE16A6NNV3 312 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms