RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 USP14P54578 494 aa24.71■■□□□ 1.55
HCFC1R1-208ENST00000575214 PKN2Q16513 984 aaKnown RBP24.71■■□□□ 1.55
HCFC1R1-208ENST00000575214 TTC22Q5TAA0 569 aa24.71■■□□□ 1.55
HCFC1R1-208ENST00000575214 VPS53Q5VIR6 699 aa24.71■■□□□ 1.55
HCFC1R1-208ENST00000575214 ACER1Q8TDN7 264 aa24.71■■□□□ 1.55
HCFC1R1-208ENST00000575214 MKNK2Q9HBH9 465 aa24.71■■□□□ 1.55
HCFC1R1-208ENST00000575214 DIAPH3Q9NSV4 1193 aa24.71■■□□□ 1.55
HCFC1R1-208ENST00000575214 ROBO3Q96MS0 1386 aa24.71■■□□□ 1.55
HCFC1R1-208ENST00000575214 LOC285556D6RIA3 1793 aa24.71■■□□□ 1.55
HCFC1R1-208ENST00000575214 OSBPP22059 807 aa24.7■■□□□ 1.55
HCFC1R1-208ENST00000575214 KIF22Q14807 665 aa24.7■■□□□ 1.55
HCFC1R1-208ENST00000575214 OTOP1Q7RTM1 612 aa24.7■■□□□ 1.55
HCFC1R1-208ENST00000575214 EFCC1Q9HA90 598 aa24.7■■□□□ 1.55
HCFC1R1-208ENST00000575214 EMILIN3Q9NT22 766 aa24.7■■□□□ 1.55
HCFC1R1-208ENST00000575214 HIP1O00291 1037 aa24.69■■□□□ 1.54
HCFC1R1-208ENST00000575214 FOXP2O15409 715 aa24.69■■□□□ 1.54
HCFC1R1-208ENST00000575214 GSPT1P15170 499 aaKnown RBP24.69■■□□□ 1.54
HCFC1R1-208ENST00000575214 CENPQQ7L2Z9 268 aaPredicted RBP24.69■■□□□ 1.54
HCFC1R1-208ENST00000575214 ZNF589Q86UQ0 364 aaPredicted RBP24.69■■□□□ 1.54
HCFC1R1-208ENST00000575214 KIAA1683Q9H0B3 1180 aa24.69■■□□□ 1.54
HCFC1R1-208ENST00000575214 CCDC171Q6TFL3 1326 aa24.69■■□□□ 1.54
HCFC1R1-208ENST00000575214 ECM2O94769 699 aaPredicted RBP24.68■■□□□ 1.54
HCFC1R1-208ENST00000575214 IRX3P78415 501 aaPredicted RBP24.68■■□□□ 1.54
HCFC1R1-208ENST00000575214 LACTBP83111 547 aaPredicted RBP24.68■■□□□ 1.54
HCFC1R1-208ENST00000575214 ICA1Q05084 483 aa24.68■■□□□ 1.54
HCFC1R1-208ENST00000575214 PPARAQ07869 468 aa24.68■■□□□ 1.54
HCFC1R1-208ENST00000575214 ARHGEF6Q15052 776 aa24.68■■□□□ 1.54
HCFC1R1-208ENST00000575214 ASCC2Q9H1I8 757 aaPredicted RBP24.68■■□□□ 1.54
HCFC1R1-208ENST00000575214 ZNF287Q9HBT7 754 aa24.68■■□□□ 1.54
HCFC1R1-208ENST00000575214 MYH8P13535 1937 aa24.68■■□□□ 1.54
HCFC1R1-208ENST00000575214 SLC3A2P08195 630 aaKnown RBP24.67■■□□□ 1.54
HCFC1R1-208ENST00000575214 BCRP11274 1271 aa24.67■■□□□ 1.54
HCFC1R1-208ENST00000575214 RASA1P20936 1047 aa24.67■■□□□ 1.54
HCFC1R1-208ENST00000575214 MFAP1P55081 439 aaKnown RBP24.67■■□□□ 1.54
HCFC1R1-208ENST00000575214 CAP1Q01518 475 aa24.67■■□□□ 1.54
HCFC1R1-208ENST00000575214 CWC27Q6UX04 472 aaKnown RBP24.67■■□□□ 1.54
HCFC1R1-208ENST00000575214 CLEC10AQ8IUN9 316 aa24.67■■□□□ 1.54
HCFC1R1-208ENST00000575214 C12orf42Q96LP6 360 aa24.67■■□□□ 1.54
HCFC1R1-208ENST00000575214 PRDM1O75626 825 aa24.67■■□□□ 1.54
HCFC1R1-208ENST00000575214 CENPBP07199 599 aaPredicted RBP24.67■■□□□ 1.54
HCFC1R1-208ENST00000575214 HOXA7P31268 230 aaPredicted RBP24.67■■□□□ 1.54
HCFC1R1-208ENST00000575214 FBXO46Q6PJ61 603 aaPredicted RBP24.67■■□□□ 1.54
HCFC1R1-208ENST00000575214 ARHGAP39Q9C0H5 1083 aa24.67■■□□□ 1.54
HCFC1R1-208ENST00000575214 ARHGEF10LQ9HCE6 1279 aa24.67■■□□□ 1.54
HCFC1R1-208ENST00000575214 A0A1W2PRG0 241 aa24.66■■□□□ 1.54
HCFC1R1-208ENST00000575214 PDE4BQ07343 736 aa24.66■■□□□ 1.54
HCFC1R1-208ENST00000575214 ZNF444Q8N0Y2 327 aaPredicted RBP24.66■■□□□ 1.54
HCFC1R1-208ENST00000575214 HSPD1P10809 573 aaKnown RBP24.65■■□□□ 1.54
HCFC1R1-208ENST00000575214 ATP2B2Q01814 1243 aa24.65■■□□□ 1.54
HCFC1R1-208ENST00000575214 ALX1Q15699 326 aa24.65■■□□□ 1.54
HCFC1R1-208ENST00000575214 ANKRD13CQ8N6S4 541 aa24.65■■□□□ 1.54
HCFC1R1-208ENST00000575214 CCDC136Q96JN2 1154 aa24.65■■□□□ 1.54
HCFC1R1-208ENST00000575214 SH2D4AQ9H788 454 aa24.65■■□□□ 1.54
HCFC1R1-208ENST00000575214 KANSL2Q9H9L4 492 aa24.65■■□□□ 1.54
HCFC1R1-208ENST00000575214 VCAM1P19320 739 aa24.64■■□□□ 1.53
HCFC1R1-208ENST00000575214 PSMC4P43686 418 aa24.64■■□□□ 1.53
HCFC1R1-208ENST00000575214 GCLCP48506 637 aaPredicted RBP24.64■■□□□ 1.53
HCFC1R1-208ENST00000575214 FGAP02671 866 aa24.63■■□□□ 1.53
HCFC1R1-208ENST00000575214 CTDSPL2Q05D32 466 aa24.63■■□□□ 1.53
HCFC1R1-208ENST00000575214 P2RX7Q99572 595 aaKnown RBP24.63■■□□□ 1.53
HCFC1R1-208ENST00000575214 HPS5Q9UPZ3 1129 aa24.63■■□□□ 1.53
HCFC1R1-208ENST00000575214 CCDC85CA6NKD9 419 aa24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 USP17L15C9J2P7 530 aa24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 USP17L13C9JLJ4 530 aa24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 USP17L11C9JVI0 530 aa24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 USP17L18D6R9N7 530 aa24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 USP17L22D6RA61 530 aa24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 USP17L17D6RBQ6 530 aa24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 USP17L19D6RCP7 530 aa24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 USP17L20D6RJB6 530 aa24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 FMNL1O95466 1100 aaPredicted RBP24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 EEF2P13639 858 aaKnown RBP24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 USP17L24Q0WX57 530 aa24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 FAM110CQ1W6H9 321 aa24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 SIAH1Q8IUQ4 282 aa24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 RPAP3Q9H6T3 665 aaPredicted RBP24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 PTPN22Q9Y2R2 807 aa24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 TMX2Q9Y320 296 aa24.62■■□□□ 1.53
HCFC1R1-208ENST00000575214 CTGFP29279 349 aa24.61■■□□□ 1.53
HCFC1R1-208ENST00000575214 HERVK_113P62684 666 aa24.61■■□□□ 1.53
HCFC1R1-208ENST00000575214 TRIM47Q96LD4 638 aa24.61■■□□□ 1.53
HCFC1R1-208ENST00000575214 GNRH1P01148 92 aa24.6■■□□□ 1.53
HCFC1R1-208ENST00000575214 TSPY3P0CV98 308 aa24.6■■□□□ 1.53
HCFC1R1-208ENST00000575214 TSPY8P0CW00 308 aa24.6■■□□□ 1.53
HCFC1R1-208ENST00000575214 FCGRTP55899 365 aa24.6■■□□□ 1.53
HCFC1R1-208ENST00000575214 ANAPC4Q9UJX5 808 aa24.6■■□□□ 1.53
HCFC1R1-208ENST00000575214 ZMYM6O95789 1325 aa24.6■■□□□ 1.53
HCFC1R1-208ENST00000575214 ZSWIM8A7E2V4 1837 aa24.59■■□□□ 1.53
HCFC1R1-208ENST00000575214 CATSPERGQ6ZRH7 1159 aa24.59■■□□□ 1.53
HCFC1R1-208ENST00000575214 SPICE1Q8N0Z3 855 aa24.59■■□□□ 1.53
HCFC1R1-208ENST00000575214 GTF3C2Q8WUA4 911 aaPredicted RBP24.59■■□□□ 1.53
HCFC1R1-208ENST00000575214 LPAR1Q92633 364 aa24.59■■□□□ 1.53
HCFC1R1-208ENST00000575214 VCPKMTQ9H867 229 aa24.59■■□□□ 1.53
HCFC1R1-208ENST00000575214 RAD21O60216 631 aa24.58■■□□□ 1.53
HCFC1R1-208ENST00000575214 HOXD10P28358 340 aa24.58■■□□□ 1.53
HCFC1R1-208ENST00000575214 FAM47AQ5JRC9 791 aa24.58■■□□□ 1.53
HCFC1R1-208ENST00000575214 TANGO6Q9C0B7 1094 aa24.58■■□□□ 1.53
HCFC1R1-208ENST00000575214 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.58■■□□□ 1.53
HCFC1R1-208ENST00000575214 HAND2P61296 217 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms