RNA–Protein interactions for RNA: ENST00000575009.5

SRRM2-222, Transcript of serine/arginine repetitive matrix 2, human

TSL 5

Gene SRRM2, Length 1,146 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-222	ENST00000575009	FAM227B	Q96M60	508 aa		31.33	■■■□□ 2.61
SRRM2-222	ENST00000575009	FEZ1	Q99689	392 aa		31.33	■■■□□ 2.61
SRRM2-222	ENST00000575009	MGAM	O43451	1857 aa		31.33	■■■□□ 2.61
SRRM2-222	ENST00000575009	PATL2	C9JE40	543 aa	Known RBP	31.32	■■■□□ 2.6
SRRM2-222	ENST00000575009	ASCC2	Q9H1I8	757 aa	Predicted RBP	31.32	■■■□□ 2.6
SRRM2-222	ENST00000575009		A0A0D9SFI3	127 aa		31.31	■■■□□ 2.6
SRRM2-222	ENST00000575009	FOXP2	O15409	715 aa		31.31	■■■□□ 2.6
SRRM2-222	ENST00000575009	USP17L2	Q6R6M4	530 aa		31.31	■■■□□ 2.6
SRRM2-222	ENST00000575009	PTPN22	Q9Y2R2	807 aa		31.31	■■■□□ 2.6
SRRM2-222	ENST00000575009	NMI	Q13287	307 aa	Predicted RBP	31.3	■■■□□ 2.6
SRRM2-222	ENST00000575009	KIF22	Q14807	665 aa		31.3	■■■□□ 2.6
SRRM2-222	ENST00000575009	PNMA3	Q9UL41	463 aa		31.3	■■■□□ 2.6
SRRM2-222	ENST00000575009	ROBO3	Q96MS0	1386 aa		31.3	■■■□□ 2.6
SRRM2-222	ENST00000575009		A0A1W2PRG0	241 aa		31.29	■■■□□ 2.6
SRRM2-222	ENST00000575009	PABPC4	Q13310	644 aa	Known RBP eCLIP	31.29	■■■□□ 2.6
SRRM2-222	ENST00000575009	VPS53	Q5VIR6	699 aa		31.29	■■■□□ 2.6
SRRM2-222	ENST00000575009	TMEM179	Q6ZVK1	233 aa		31.29	■■■□□ 2.6
SRRM2-222	ENST00000575009	TAOK2	Q9UL54	1235 aa		31.29	■■■□□ 2.6
SRRM2-222	ENST00000575009	OSBP	P22059	807 aa		31.28	■■■□□ 2.6
SRRM2-222	ENST00000575009	ANKRD13C	Q8N6S4	541 aa		31.28	■■■□□ 2.6
SRRM2-222	ENST00000575009	TRIM47	Q96LD4	638 aa		31.28	■■■□□ 2.6
SRRM2-222	ENST00000575009	KIAA1683	Q9H0B3	1180 aa		31.28	■■■□□ 2.6
SRRM2-222	ENST00000575009	HELLS	Q9NRZ9	838 aa		31.28	■■■□□ 2.6
SRRM2-222	ENST00000575009	GREB1L	Q9C091	1923 aa	Predicted RBP	31.28	■■■□□ 2.6
SRRM2-222	ENST00000575009	PSMC4	P43686	418 aa		31.27	■■■□□ 2.6
SRRM2-222	ENST00000575009	C12orf42	Q96LP6	360 aa		31.27	■■■□□ 2.6
SRRM2-222	ENST00000575009	HOXA7	P31268	230 aa	Predicted RBP	31.26	■■■□□ 2.59
SRRM2-222	ENST00000575009	IRX3	P78415	501 aa	Predicted RBP	31.26	■■■□□ 2.59
SRRM2-222	ENST00000575009	SIAH1	Q8IUQ4	282 aa		31.26	■■■□□ 2.59
SRRM2-222	ENST00000575009	CCDC17	Q96LX7	622 aa		31.26	■■■□□ 2.59
SRRM2-222	ENST00000575009	NACAP1	Q9BZK3	213 aa		31.26	■■■□□ 2.59
SRRM2-222	ENST00000575009	NAPB	Q9H115	298 aa		31.26	■■■□□ 2.59
SRRM2-222	ENST00000575009	PEX10	O60683	326 aa		31.25	■■■□□ 2.59
SRRM2-222	ENST00000575009	RASA1	P20936	1047 aa		31.25	■■■□□ 2.59
SRRM2-222	ENST00000575009	ZNF589	Q86UQ0	364 aa	Predicted RBP	31.25	■■■□□ 2.59
SRRM2-222	ENST00000575009	P2RX7	Q99572	595 aa	Known RBP	31.25	■■■□□ 2.59
SRRM2-222	ENST00000575009	PTCH2	Q9Y6C5	1203 aa		31.25	■■■□□ 2.59
SRRM2-222	ENST00000575009	HTT	P42858	3142 aa		31.25	■■■□□ 2.59
SRRM2-222	ENST00000575009	PRDM1	O75626	825 aa		31.24	■■■□□ 2.59
SRRM2-222	ENST00000575009	FMNL1	O95466	1100 aa	Predicted RBP	31.24	■■■□□ 2.59
SRRM2-222	ENST00000575009	SDS	P20132	328 aa		31.24	■■■□□ 2.59
SRRM2-222	ENST00000575009	USP14	P54578	494 aa		31.24	■■■□□ 2.59
SRRM2-222	ENST00000575009	ICA1	Q05084	483 aa		31.24	■■■□□ 2.59
SRRM2-222	ENST00000575009	ARHGEF6	Q15052	776 aa		31.24	■■■□□ 2.59
SRRM2-222	ENST00000575009	MCMDC2	Q4G0Z9	681 aa		31.24	■■■□□ 2.59
SRRM2-222	ENST00000575009	VCAM1	P19320	739 aa		31.23	■■■□□ 2.59
SRRM2-222	ENST00000575009	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	31.23	■■■□□ 2.59
SRRM2-222	ENST00000575009	MKNK2	Q9HBH9	465 aa		31.23	■■■□□ 2.59
SRRM2-222	ENST00000575009	GSPT1	P15170	499 aa	Known RBP	31.22	■■■□□ 2.59
SRRM2-222	ENST00000575009	HERVK_113	P62684	666 aa		31.22	■■■□□ 2.59
SRRM2-222	ENST00000575009	PPARA	Q07869	468 aa		31.22	■■■□□ 2.59
SRRM2-222	ENST00000575009	KIAA1755	Q5JYT7	1200 aa		31.22	■■■□□ 2.59
SRRM2-222	ENST00000575009	GCLC	P48506	637 aa	Predicted RBP	31.21	■■■□□ 2.59
SRRM2-222	ENST00000575009	FAM110C	Q1W6H9	321 aa		31.21	■■■□□ 2.59
SRRM2-222	ENST00000575009	EEF2	P13639	858 aa	Known RBP	31.2	■■■□□ 2.59
SRRM2-222	ENST00000575009	FCGRT	P55899	365 aa		31.2	■■■□□ 2.59
SRRM2-222	ENST00000575009	SOX10	P56693	466 aa		31.2	■■■□□ 2.59
SRRM2-222	ENST00000575009	ATP2B2	Q01814	1243 aa		31.2	■■■□□ 2.59
SRRM2-222	ENST00000575009	TTC22	Q5TAA0	569 aa		31.2	■■■□□ 2.59
SRRM2-222	ENST00000575009	POTEE	Q6S8J3	1075 aa		31.2	■■■□□ 2.59
SRRM2-222	ENST00000575009	TICAM2	Q86XR7	235 aa		31.2	■■■□□ 2.59
SRRM2-222	ENST00000575009	RPAP3	Q9H6T3	665 aa	Predicted RBP	31.2	■■■□□ 2.59
SRRM2-222	ENST00000575009	DOCK3	Q8IZD9	2030 aa		31.19	■■■□□ 2.58
SRRM2-222	ENST00000575009	USP17L15	C9J2P7	530 aa		31.19	■■■□□ 2.58
SRRM2-222	ENST00000575009	USP17L13	C9JLJ4	530 aa		31.19	■■■□□ 2.58
SRRM2-222	ENST00000575009	USP17L11	C9JVI0	530 aa		31.19	■■■□□ 2.58
SRRM2-222	ENST00000575009	USP17L18	D6R9N7	530 aa		31.19	■■■□□ 2.58
SRRM2-222	ENST00000575009	USP17L22	D6RA61	530 aa		31.19	■■■□□ 2.58
SRRM2-222	ENST00000575009	USP17L17	D6RBQ6	530 aa		31.19	■■■□□ 2.58
SRRM2-222	ENST00000575009	USP17L19	D6RCP7	530 aa		31.19	■■■□□ 2.58
SRRM2-222	ENST00000575009	USP17L20	D6RJB6	530 aa		31.19	■■■□□ 2.58
SRRM2-222	ENST00000575009	CTDSPL2	Q05D32	466 aa		31.19	■■■□□ 2.58
SRRM2-222	ENST00000575009	USP17L24	Q0WX57	530 aa		31.19	■■■□□ 2.58
SRRM2-222	ENST00000575009	ARHGEF10L	Q9HCE6	1279 aa		31.19	■■■□□ 2.58
SRRM2-222	ENST00000575009	TXNRD2	Q9NNW7	524 aa		31.19	■■■□□ 2.58
SRRM2-222	ENST00000575009	SRRD	Q9UH36	339 aa		31.19	■■■□□ 2.58
SRRM2-222	ENST00000575009	CCDC171	Q6TFL3	1326 aa		31.19	■■■□□ 2.58
SRRM2-222	ENST00000575009	GNRH1	P01148	92 aa		31.18	■■■□□ 2.58
SRRM2-222	ENST00000575009	CWC27	Q6UX04	472 aa	Known RBP	31.18	■■■□□ 2.58
SRRM2-222	ENST00000575009	CATSPERG	Q6ZRH7	1159 aa		31.18	■■■□□ 2.58
SRRM2-222	ENST00000575009	TMX2	Q9Y320	296 aa		31.18	■■■□□ 2.58
SRRM2-222	ENST00000575009	MYPN	Q86TC9	1320 aa		31.18	■■■□□ 2.58
SRRM2-222	ENST00000575009	PRKCZ	Q05513	592 aa		31.17	■■■□□ 2.58
SRRM2-222	ENST00000575009	KANSL2	Q9H9L4	492 aa		31.17	■■■□□ 2.58
SRRM2-222	ENST00000575009	INCENP	Q9NQS7	918 aa		31.17	■■■□□ 2.58
SRRM2-222	ENST00000575009	DIAPH3	Q9NSV4	1193 aa		31.17	■■■□□ 2.58
SRRM2-222	ENST00000575009	GABRQ	Q9UN88	632 aa		31.17	■■■□□ 2.58
SRRM2-222	ENST00000575009	TACC3	Q9Y6A5	838 aa		31.17	■■■□□ 2.58
SRRM2-222	ENST00000575009	MYH4	Q9Y623	1939 aa		31.16	■■■□□ 2.58
SRRM2-222	ENST00000575009	HSPD1	P10809	573 aa	Known RBP	31.16	■■■□□ 2.58
SRRM2-222	ENST00000575009	SPICE1	Q8N0Z3	855 aa		31.16	■■■□□ 2.58
SRRM2-222	ENST00000575009	PAGR1	Q9BTK6	254 aa		31.16	■■■□□ 2.58
SRRM2-222	ENST00000575009	RBPJL	Q9UBG7	517 aa		31.16	■■■□□ 2.58
SRRM2-222	ENST00000575009	MORF4L1	Q9UBU8	362 aa		31.16	■■■□□ 2.58
SRRM2-222	ENST00000575009	RLF	Q13129	1914 aa		31.16	■■■□□ 2.58
SRRM2-222	ENST00000575009	TNPO2	O14787	897 aa	Known RBP	31.15	■■■□□ 2.58
SRRM2-222	ENST00000575009	ZNF444	Q8N0Y2	327 aa	Predicted RBP	31.15	■■■□□ 2.58
SRRM2-222	ENST00000575009	VCPKMT	Q9H867	229 aa		31.15	■■■□□ 2.58
SRRM2-222	ENST00000575009	FGA	P02671	866 aa		31.14	■■■□□ 2.58
SRRM2-222	ENST00000575009	PDE4B	Q07343	736 aa		31.14	■■■□□ 2.58

Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms