RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 GTF3C6Q969F1 213 aa8.62□□□□□ -1.03
RPA1-207ENST00000574049 DYNLL2Q96FJ2 89 aa8.62□□□□□ -1.03
RPA1-207ENST00000574049 DSCC1Q9BVC3 393 aa8.62□□□□□ -1.03
RPA1-207ENST00000574049 ANO10Q9NW15 660 aa8.62□□□□□ -1.03
RPA1-207ENST00000574049 ARGLU1Q9NWB6 273 aaPredicted RBP8.62□□□□□ -1.03
RPA1-207ENST00000574049 CALCOCO1Q9P1Z2 691 aa8.62□□□□□ -1.03
RPA1-207ENST00000574049 DNAI1Q9UI46 699 aa8.62□□□□□ -1.03
RPA1-207ENST00000574049 CLRN2A0PK11 232 aa8.62□□□□□ -1.03
RPA1-207ENST00000574049 NOM1Q5C9Z4 860 aaKnown RBP8.62□□□□□ -1.03
RPA1-207ENST00000574049 MATR3P43243 847 aaKnown RBP eCLIP8.61□□□□□ -1.03
RPA1-207ENST00000574049 SYKP43405 635 aa8.61□□□□□ -1.03
RPA1-207ENST00000574049 DMTNQ08495 405 aa8.61□□□□□ -1.03
RPA1-207ENST00000574049 OGFOD1Q8N543 542 aa8.61□□□□□ -1.03
RPA1-207ENST00000574049 CCDC102AQ96A19 550 aa8.61□□□□□ -1.03
RPA1-207ENST00000574049 DHX58Q96C10 678 aa8.61□□□□□ -1.03
RPA1-207ENST00000574049 USP40Q9NVE5 1235 aa8.61□□□□□ -1.03
RPA1-207ENST00000574049 PIM2Q9P1W9 311 aa8.61□□□□□ -1.03
RPA1-207ENST00000574049 KCNJ14Q9UNX9 436 aa8.61□□□□□ -1.03
RPA1-207ENST00000574049 SIPA1L3O60292 1781 aaPredicted RBP8.61□□□□□ -1.03
RPA1-207ENST00000574049 FAM196BA6NMK8 535 aa8.61□□□□□ -1.03
RPA1-207ENST00000574049 RIOK3O14730 519 aaKnown RBP8.61□□□□□ -1.03
RPA1-207ENST00000574049 GOLGA8FQ08AF8 430 aa8.61□□□□□ -1.03
RPA1-207ENST00000574049 GOLGA8DPQ0D2H9 430 aa8.61□□□□□ -1.03
RPA1-207ENST00000574049 SF3A3Q12874 501 aaKnown RBP eCLIP8.61□□□□□ -1.03
RPA1-207ENST00000574049 KARSQ15046 597 aaKnown RBP8.61□□□□□ -1.03
RPA1-207ENST00000574049 CATIPQ7Z7H3 387 aa8.61□□□□□ -1.03
RPA1-207ENST00000574049 SH3RF3Q8TEJ3 882 aaPredicted RBP8.61□□□□□ -1.03
RPA1-207ENST00000574049 MAGEC2Q9UBF1 373 aaPredicted RBP8.61□□□□□ -1.03
RPA1-207ENST00000574049 GSTO1P78417 241 aa8.61□□□□□ -1.03
RPA1-207ENST00000574049 DALRD3Q5D0E6 543 aaKnown RBP8.61□□□□□ -1.03
RPA1-207ENST00000574049 SLC44A5Q8NCS7 719 aa8.61□□□□□ -1.03
RPA1-207ENST00000574049 NSUN4Q96CB9 384 aaKnown RBP8.61□□□□□ -1.03
RPA1-207ENST00000574049 DRC1Q96MC2 740 aa8.61□□□□□ -1.03
RPA1-207ENST00000574049 BTAF1O14981 1849 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 CCDC194A0A1B0GVG4 234 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 ECE2O60344 883 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 TOP1P11387 765 aaKnown RBP8.6□□□□□ -1.03
RPA1-207ENST00000574049 PPARAQ07869 468 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 LONRF3Q496Y0 759 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 TBC1D10CQ8IV04 446 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.6□□□□□ -1.03
RPA1-207ENST00000574049 DEF6Q9H4E7 631 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 PLEKHA4Q9H4M7 779 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 ZSWIM6Q9HCJ5 1215 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 ARFGEF2Q9Y6D5 1785 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 SHANK3Q9BYB0 1731 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 UNCXA6NJT0 531 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 GSG1L2A8MUP6 293 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 EVX2Q03828 476 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 SEPT11Q9NVA2 429 aaKnown RBP8.6□□□□□ -1.03
RPA1-207ENST00000574049 SLURP2P0DP57 97 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 ZNF76P36508 570 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 MCM6Q14566 821 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 RTN1Q16799 776 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 IFIT1BQ5T764 474 aaKnown RBP8.6□□□□□ -1.03
RPA1-207ENST00000574049 HEATR3Q7Z4Q2 680 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 NIM1KQ8IY84 436 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 MYRIPQ8NFW9 859 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 CABP5Q9NP86 173 aa8.6□□□□□ -1.03
RPA1-207ENST00000574049 DDX19AQ9NUU7 478 aaKnown RBP8.6□□□□□ -1.03
RPA1-207ENST00000574049 TCP10L2B9ZVM9 353 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 SPTLC2O15270 562 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 BRD1O95696 1058 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 GNAT2P19087 354 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 CCDC93Q567U6 631 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 SYT10Q6XYQ8 523 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 SLF2Q8IX21 1173 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 GDAP1L1Q96MZ0 367 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 TMOD2Q9NZR1 351 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 PCDHAC2Q9Y5I4 1007 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 TSPY3P0CV98 308 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 TSPY8P0CW00 308 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 GNG11P61952 73 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 PDE4BQ07343 736 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 PRKG1Q13976 671 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 ARID5BQ14865 1188 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 CRY2Q49AN0 593 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 HSP90B2PQ58FF3 399 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 AKNAD1Q5T1N1 836 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 C10orf67Q8IYJ2 551 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 TDRD7Q8NHU6 1098 aaKnown RBP8.59□□□□□ -1.03
RPA1-207ENST00000574049 ESR2Q92731 530 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 COA1Q9GZY4 146 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 RNF41Q9H4P4 317 aaPredicted RBP8.59□□□□□ -1.03
RPA1-207ENST00000574049 EPB41L4AQ9HCS5 686 aaPredicted RBP8.59□□□□□ -1.03
RPA1-207ENST00000574049 CWC15Q9P013 229 aaKnown RBP8.59□□□□□ -1.03
RPA1-207ENST00000574049 IFNKQ9P0W0 207 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 PYCARDQ9ULZ3 195 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 UTRNP46939 3433 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 NMT2O60551 498 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 ZNF174Q15697 407 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 ARHGAP29Q52LW3 1261 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 CEP135Q66GS9 1140 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 KRT222Q8N1A0 295 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 MMRN2Q9H8L6 949 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 LZTFL1Q9NQ48 299 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 ADAMTS7Q9UKP4 1686 aa8.59□□□□□ -1.03
RPA1-207ENST00000574049 ANKRD62A6NC57 917 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 MCM7P33993 719 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 KIF18AQ8NI77 898 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms