RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 RAB3GAP1Q15042 981 aa21.01■□□□□ 0.95
SMG6-214ENST00000573827 SLAIN1Q8ND83 568 aa21.01■□□□□ 0.95
SMG6-214ENST00000573827 OSBP2Q969R2 916 aa21.01■□□□□ 0.95
SMG6-214ENST00000573827 YTHDC1Q96MU7 727 aaKnown RBP21.01■□□□□ 0.95
SMG6-214ENST00000573827 PLXNB2O15031 1838 aa21.01■□□□□ 0.95
SMG6-214ENST00000573827 USP17L12C9JPN9 530 aa21■□□□□ 0.95
SMG6-214ENST00000573827 USP17L21D6R901 530 aa21■□□□□ 0.95
SMG6-214ENST00000573827 VCAM1P19320 739 aa21■□□□□ 0.95
SMG6-214ENST00000573827 IRX3P78415 501 aaPredicted RBP21■□□□□ 0.95
SMG6-214ENST00000573827 ZSCAN25Q6NSZ9 544 aa21■□□□□ 0.95
SMG6-214ENST00000573827 PXYLP1Q8TE99 480 aa21■□□□□ 0.95
SMG6-214ENST00000573827 TTC41PQ6P2S7 1318 aa21■□□□□ 0.95
SMG6-214ENST00000573827 ADCY3O60266 1144 aa20.99■□□□□ 0.95
SMG6-214ENST00000573827 CNMDO75829 334 aa20.99■□□□□ 0.95
SMG6-214ENST00000573827 ELNP15502 786 aa20.99■□□□□ 0.95
SMG6-214ENST00000573827 HDAC1Q13547 482 aaPredicted RBP20.99■□□□□ 0.95
SMG6-214ENST00000573827 Q3C1V9 767 aa20.99■□□□□ 0.95
SMG6-214ENST00000573827 CTR9Q6PD62 1173 aa20.99■□□□□ 0.95
SMG6-214ENST00000573827 SWAP70Q9UH65 585 aa20.99■□□□□ 0.95
SMG6-214ENST00000573827 SLC4A4Q9Y6R1 1079 aa20.99■□□□□ 0.95
SMG6-214ENST00000573827 GSG1L2A8MUP6 293 aa20.98■□□□□ 0.95
SMG6-214ENST00000573827 RNF113AO15541 343 aaKnown RBP20.98■□□□□ 0.95
SMG6-214ENST00000573827 CCL5P13501 91 aa20.98■□□□□ 0.95
SMG6-214ENST00000573827 AKR1B1P15121 316 aa20.98■□□□□ 0.95
SMG6-214ENST00000573827 ZYXQ15942 572 aaKnown RBP20.98■□□□□ 0.95
SMG6-214ENST00000573827 KIAA1755Q5JYT7 1200 aa20.98■□□□□ 0.95
SMG6-214ENST00000573827 PRPF38BQ5VTL8 546 aaKnown RBP20.98■□□□□ 0.95
SMG6-214ENST00000573827 CATSPERGQ6ZRH7 1159 aa20.98■□□□□ 0.95
SMG6-214ENST00000573827 C16orf86Q6ZW13 317 aa20.98■□□□□ 0.95
SMG6-214ENST00000573827 GPATCH3Q96I76 525 aa20.98■□□□□ 0.95
SMG6-214ENST00000573827 CABP5Q9NP86 173 aa20.98■□□□□ 0.95
SMG6-214ENST00000573827 CDK8P49336 464 aa20.97■□□□□ 0.95
SMG6-214ENST00000573827 USP14P54578 494 aa20.97■□□□□ 0.95
SMG6-214ENST00000573827 LBX2Q6XYB7 198 aa20.97■□□□□ 0.95
SMG6-214ENST00000573827 UBE2Q1Q7Z7E8 422 aa20.97■□□□□ 0.95
SMG6-214ENST00000573827 CLEC10AQ8IUN9 316 aa20.97■□□□□ 0.95
SMG6-214ENST00000573827 GPRC5AQ8NFJ5 357 aa20.97■□□□□ 0.95
SMG6-214ENST00000573827 APPBP2Q92624 585 aa20.97■□□□□ 0.95
SMG6-214ENST00000573827 COA7Q96BR5 231 aa20.97■□□□□ 0.95
SMG6-214ENST00000573827 FEZ1Q99689 392 aa20.97■□□□□ 0.95
SMG6-214ENST00000573827 UNC93B1Q9H1C4 597 aa20.97■□□□□ 0.95
SMG6-214ENST00000573827 RLFQ13129 1914 aa20.96■□□□□ 0.95
SMG6-214ENST00000573827 USP17L15C9J2P7 530 aa20.96■□□□□ 0.95
SMG6-214ENST00000573827 USP17L13C9JLJ4 530 aa20.96■□□□□ 0.95
SMG6-214ENST00000573827 USP17L11C9JVI0 530 aa20.96■□□□□ 0.95
SMG6-214ENST00000573827 USP17L18D6R9N7 530 aa20.96■□□□□ 0.95
SMG6-214ENST00000573827 USP17L22D6RA61 530 aa20.96■□□□□ 0.95
SMG6-214ENST00000573827 USP17L17D6RBQ6 530 aa20.96■□□□□ 0.95
SMG6-214ENST00000573827 USP17L19D6RCP7 530 aa20.96■□□□□ 0.95
SMG6-214ENST00000573827 USP17L20D6RJB6 530 aa20.96■□□□□ 0.95
SMG6-214ENST00000573827 INHAP05111 366 aa20.96■□□□□ 0.95
SMG6-214ENST00000573827 GJB1P08034 283 aa20.96■□□□□ 0.95
SMG6-214ENST00000573827 ERVK-9P63128 1117 aa20.96■□□□□ 0.95
SMG6-214ENST00000573827 ERVK-24P63145 666 aa20.96■□□□□ 0.95
SMG6-214ENST00000573827 USP17L24Q0WX57 530 aa20.96■□□□□ 0.95
SMG6-214ENST00000573827 TMEM179Q6ZVK1 233 aa20.96■□□□□ 0.95
SMG6-214ENST00000573827 USP6NLQ92738 828 aa20.96■□□□□ 0.95
SMG6-214ENST00000573827 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.96■□□□□ 0.95
SMG6-214ENST00000573827 PORCNQ9H237 461 aa20.96■□□□□ 0.95
SMG6-214ENST00000573827 EPB41L4AQ9HCS5 686 aaPredicted RBP20.96■□□□□ 0.95
SMG6-214ENST00000573827 M0R2C6 588 aa20.95■□□□□ 0.94
SMG6-214ENST00000573827 GJA8P48165 433 aa20.95■□□□□ 0.94
SMG6-214ENST00000573827 SBK1Q52WX2 424 aa20.95■□□□□ 0.94
SMG6-214ENST00000573827 GTF3C2Q8WUA4 911 aaPredicted RBP20.95■□□□□ 0.94
SMG6-214ENST00000573827 GREB1LQ9C091 1923 aaPredicted RBP20.94■□□□□ 0.94
SMG6-214ENST00000573827 SPDYE16A6NNV3 312 aaPredicted RBP20.94■□□□□ 0.94
SMG6-214ENST00000573827 GLRX3O76003 335 aaKnown RBP20.94■□□□□ 0.94
SMG6-214ENST00000573827 ZFYP08048 801 aaPredicted RBP20.94■□□□□ 0.94
SMG6-214ENST00000573827 MX1P20591 662 aa20.94■□□□□ 0.94
SMG6-214ENST00000573827 GIMAP6Q6P9H5 292 aa20.94■□□□□ 0.94
SMG6-214ENST00000573827 PAK6Q9NQU5 681 aaPredicted RBP20.94■□□□□ 0.94
SMG6-214ENST00000573827 STAP2Q9UGK3 403 aa20.94■□□□□ 0.94
SMG6-214ENST00000573827 RABGAP1Q9Y3P9 1069 aa20.94■□□□□ 0.94
SMG6-214ENST00000573827 ROBO3Q96MS0 1386 aa20.94■□□□□ 0.94
SMG6-214ENST00000573827 MYH8P13535 1937 aa20.94■□□□□ 0.94
SMG6-214ENST00000573827 MPHOSPH10O00566 681 aaKnown RBP20.93■□□□□ 0.94
SMG6-214ENST00000573827 GPAA1O43292 621 aa20.93■□□□□ 0.94
SMG6-214ENST00000573827 UBXN2AP68543 259 aa20.93■□□□□ 0.94
SMG6-214ENST00000573827 CCDC17Q96LX7 622 aa20.93■□□□□ 0.94
SMG6-214ENST00000573827 SEC62Q99442 399 aaKnown RBP20.93■□□□□ 0.94
SMG6-214ENST00000573827 RNF208Q9H0X6 261 aa20.93■□□□□ 0.94
SMG6-214ENST00000573827 RPAP3Q9H6T3 665 aaPredicted RBP20.93■□□□□ 0.94
SMG6-214ENST00000573827 BTBD7Q9P203 1132 aa20.93■□□□□ 0.94
SMG6-214ENST00000573827 ARPP21Q9UBL0 812 aaPredicted RBP20.93■□□□□ 0.94
SMG6-214ENST00000573827 TMX2Q9Y320 296 aa20.93■□□□□ 0.94
SMG6-214ENST00000573827 ERC2O15083 957 aa20.92■□□□□ 0.94
SMG6-214ENST00000573827 MORN1Q5T089 497 aa20.92■□□□□ 0.94
SMG6-214ENST00000573827 GCC1Q96CN9 775 aa20.92■□□□□ 0.94
SMG6-214ENST00000573827 A0A0G2JMZ2 1700 aa20.91■□□□□ 0.94
SMG6-214ENST00000573827 FOXP2O15409 715 aa20.91■□□□□ 0.94
SMG6-214ENST00000573827 MAPK4P31152 587 aa20.91■□□□□ 0.94
SMG6-214ENST00000573827 TRIM32Q13049 653 aa20.91■□□□□ 0.94
SMG6-214ENST00000573827 ZMYM1Q5SVZ6 1142 aa20.91■□□□□ 0.94
SMG6-214ENST00000573827 ANKRD45Q5TZF3 282 aa20.91■□□□□ 0.94
SMG6-214ENST00000573827 U2AF1L4Q8WU68 220 aaKnown RBP20.91■□□□□ 0.94
SMG6-214ENST00000573827 TRIB2Q92519 343 aa20.91■□□□□ 0.94
SMG6-214ENST00000573827 PAGR1Q9BTK6 254 aa20.91■□□□□ 0.94
SMG6-214ENST00000573827 BIN2Q9UBW5 565 aaPredicted RBP20.91■□□□□ 0.94
SMG6-214ENST00000573827 RASA1P20936 1047 aa20.9■□□□□ 0.94
SMG6-214ENST00000573827 ICA1Q05084 483 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms