RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 CTR9Q6PD62 1173 aa16.14■□□□□ 0.17
RPAIN-213ENST00000573577 IFNL3Q8IZI9 196 aa16.14■□□□□ 0.17
RPAIN-213ENST00000573577 SLC44A5Q8NCS7 719 aa16.14■□□□□ 0.17
RPAIN-213ENST00000573577 CD99L2Q8TCZ2 262 aa16.14■□□□□ 0.17
RPAIN-213ENST00000573577 DYNLL2Q96FJ2 89 aa16.14■□□□□ 0.17
RPAIN-213ENST00000573577 ADGRA2Q96PE1 1338 aa16.14■□□□□ 0.17
RPAIN-213ENST00000573577 LOC285556D6RIA3 1793 aa16.13■□□□□ 0.17
RPAIN-213ENST00000573577 CYP2C8P10632 490 aa16.13■□□□□ 0.17
RPAIN-213ENST00000573577 CHMLP26374 656 aa16.13■□□□□ 0.17
RPAIN-213ENST00000573577 RAB3GAP1Q15042 981 aa16.13■□□□□ 0.17
RPAIN-213ENST00000573577 TREML2Q5T2D2 321 aa16.13■□□□□ 0.17
RPAIN-213ENST00000573577 CASC1Q6TDU7 716 aa16.13■□□□□ 0.17
RPAIN-213ENST00000573577 C17orf99Q6UX52 265 aa16.13■□□□□ 0.17
RPAIN-213ENST00000573577 ZNF589Q86UQ0 364 aaPredicted RBP16.13■□□□□ 0.17
RPAIN-213ENST00000573577 EPB41L4AQ9HCS5 686 aaPredicted RBP16.13■□□□□ 0.17
RPAIN-213ENST00000573577 CABP5Q9NP86 173 aa16.13■□□□□ 0.17
RPAIN-213ENST00000573577 CPA4Q9UI42 421 aa16.13■□□□□ 0.17
RPAIN-213ENST00000573577 BAZ2AQ9UIF9 1905 aaKnown RBP16.12■□□□□ 0.17
RPAIN-213ENST00000573577 C19orf81C9J6K1 198 aa16.12■□□□□ 0.17
RPAIN-213ENST00000573577 USP17L10C9JJH3 530 aa16.12■□□□□ 0.17
RPAIN-213ENST00000573577 SMIM22K7EJ46 135 aa16.12■□□□□ 0.17
RPAIN-213ENST00000573577 SLC3A2P08195 630 aaKnown RBP16.12■□□□□ 0.17
RPAIN-213ENST00000573577 ALX1Q15699 326 aa16.12■□□□□ 0.17
RPAIN-213ENST00000573577 C16orf86Q6ZW13 317 aa16.12■□□□□ 0.17
RPAIN-213ENST00000573577 OTOP1Q7RTM1 612 aa16.12■□□□□ 0.17
RPAIN-213ENST00000573577 ZNF287Q9HBT7 754 aa16.12■□□□□ 0.17
RPAIN-213ENST00000573577 TMOD4Q9NZQ9 345 aa16.12■□□□□ 0.17
RPAIN-213ENST00000573577 TRIM17Q9Y577 477 aa16.12■□□□□ 0.17
RPAIN-213ENST00000573577 MINDY4BA8MYZ0 360 aa16.11■□□□□ 0.17
RPAIN-213ENST00000573577 MPHOSPH10O00566 681 aaKnown RBP16.11■□□□□ 0.17
RPAIN-213ENST00000573577 HSPD1P10809 573 aaKnown RBP16.11■□□□□ 0.17
RPAIN-213ENST00000573577 CDK8P49336 464 aa16.11■□□□□ 0.17
RPAIN-213ENST00000573577 LACTBP83111 547 aaPredicted RBP16.11■□□□□ 0.17
RPAIN-213ENST00000573577 PABPC4Q13310 644 aaKnown RBP eCLIP16.11■□□□□ 0.171e-6■■■■□ 26.3
RPAIN-213ENST00000573577 SMCR8Q8TEV9 937 aaPredicted RBP16.11■□□□□ 0.17
RPAIN-213ENST00000573577 EFCC1Q9HA90 598 aa16.11■□□□□ 0.17
RPAIN-213ENST00000573577 PNMA3Q9UL41 463 aa16.11■□□□□ 0.17
RPAIN-213ENST00000573577 ZMYM6O95789 1325 aa16.11■□□□□ 0.17
RPAIN-213ENST00000573577 ROBO3Q96MS0 1386 aa16.11■□□□□ 0.17
RPAIN-213ENST00000573577 BCRP11274 1271 aa16.1■□□□□ 0.17
RPAIN-213ENST00000573577 GUCY1A2P33402 732 aa16.1■□□□□ 0.17
RPAIN-213ENST00000573577 CAP1Q01518 475 aa16.1■□□□□ 0.17
RPAIN-213ENST00000573577 KIF22Q14807 665 aa16.1■□□□□ 0.17
RPAIN-213ENST00000573577 SEPT2Q15019 361 aa16.1■□□□□ 0.17
RPAIN-213ENST00000573577 ARHGEF6Q15052 776 aa16.1■□□□□ 0.17
RPAIN-213ENST00000573577 VPS53Q5VIR6 699 aa16.1■□□□□ 0.17
RPAIN-213ENST00000573577 FBXO46Q6PJ61 603 aaPredicted RBP16.1■□□□□ 0.17
RPAIN-213ENST00000573577 TMEM179Q6ZVK1 233 aa16.1■□□□□ 0.17
RPAIN-213ENST00000573577 FEZ1Q99689 392 aa16.1■□□□□ 0.17
RPAIN-213ENST00000573577 DSCC1Q9BVC3 393 aa16.1■□□□□ 0.17
RPAIN-213ENST00000573577 CDC45O75419 566 aa16.09■□□□□ 0.17
RPAIN-213ENST00000573577 PDE4BQ07343 736 aa16.09■□□□□ 0.17
RPAIN-213ENST00000573577 PPARAQ07869 468 aa16.09■□□□□ 0.17
RPAIN-213ENST00000573577 USP17L2Q6R6M4 530 aa16.09■□□□□ 0.17
RPAIN-213ENST00000573577 CCDC17Q96LX7 622 aa16.09■□□□□ 0.17
RPAIN-213ENST00000573577 KIAA1683Q9H0B3 1180 aa16.09■□□□□ 0.17
RPAIN-213ENST00000573577 EMILIN3Q9NT22 766 aa16.09■□□□□ 0.17
RPAIN-213ENST00000573577 HPS5Q9UPZ3 1129 aa16.09■□□□□ 0.17
RPAIN-213ENST00000573577 FOXP2O15409 715 aa16.08■□□□□ 0.16
RPAIN-213ENST00000573577 SGSM2O43147 1006 aa16.08■□□□□ 0.16
RPAIN-213ENST00000573577 FGAP02671 866 aa16.08■□□□□ 0.16
RPAIN-213ENST00000573577 AKR1B1P15121 316 aa16.08■□□□□ 0.16
RPAIN-213ENST00000573577 OSBPP22059 807 aa16.08■□□□□ 0.16
RPAIN-213ENST00000573577 USP14P54578 494 aa16.08■□□□□ 0.16
RPAIN-213ENST00000573577 ZYXQ15942 572 aaKnown RBP16.08■□□□□ 0.16
RPAIN-213ENST00000573577 ACER1Q8TDN7 264 aa16.08■□□□□ 0.16
RPAIN-213ENST00000573577 C12orf42Q96LP6 360 aa16.08■□□□□ 0.16
RPAIN-213ENST00000573577 ARHGAP39Q9C0H5 1083 aa16.08■□□□□ 0.16
RPAIN-213ENST00000573577 ASCC2Q9H1I8 757 aaPredicted RBP16.08■□□□□ 0.16
RPAIN-213ENST00000573577 MKNK2Q9HBH9 465 aa16.08■□□□□ 0.16
RPAIN-213ENST00000573577 CTNNA3Q9UI47 895 aa16.08■□□□□ 0.16
RPAIN-213ENST00000573577 PTPN22Q9Y2R2 807 aa16.08■□□□□ 0.16
RPAIN-213ENST00000573577 CCDC85CA6NKD9 419 aa16.07■□□□□ 0.16
RPAIN-213ENST00000573577 HOXA7P31268 230 aaPredicted RBP16.07■□□□□ 0.16
RPAIN-213ENST00000573577 IRX3P78415 501 aaPredicted RBP16.07■□□□□ 0.16
RPAIN-213ENST00000573577 KIAA1211Q6ZU35 1233 aa16.07■□□□□ 0.16
RPAIN-213ENST00000573577 HTTP42858 3142 aa16.06■□□□□ 0.16
RPAIN-213ENST00000573577 GNRH1P01148 92 aa16.06■□□□□ 0.16
RPAIN-213ENST00000573577 PSMC4P43686 418 aa16.06■□□□□ 0.16
RPAIN-213ENST00000573577 GCLCP48506 637 aaPredicted RBP16.06■□□□□ 0.16
RPAIN-213ENST00000573577 TRIM47Q96LD4 638 aa16.06■□□□□ 0.16
RPAIN-213ENST00000573577 ANAPC4Q9UJX5 808 aa16.06■□□□□ 0.16
RPAIN-213ENST00000573577 MYH8P13535 1937 aa16.06■□□□□ 0.16
RPAIN-213ENST00000573577 A0A1W2PRG0 241 aa16.05■□□□□ 0.16
RPAIN-213ENST00000573577 ECM2O94769 699 aaPredicted RBP16.05■□□□□ 0.16
RPAIN-213ENST00000573577 PCP11498 1178 aaKnown RBP16.05■□□□□ 0.16
RPAIN-213ENST00000573577 VCAM1P19320 739 aa16.05■□□□□ 0.16
RPAIN-213ENST00000573577 RASA1P20936 1047 aa16.05■□□□□ 0.16
RPAIN-213ENST00000573577 CTGFP29279 349 aa16.05■□□□□ 0.16
RPAIN-213ENST00000573577 ICA1Q05084 483 aa16.05■□□□□ 0.16
RPAIN-213ENST00000573577 IMMTQ16891 758 aaKnown RBP16.05■□□□□ 0.16
RPAIN-213ENST00000573577 FAM110CQ1W6H9 321 aa16.05■□□□□ 0.16
RPAIN-213ENST00000573577 CLEC10AQ8IUN9 316 aa16.05■□□□□ 0.16
RPAIN-213ENST00000573577 ZNF444Q8N0Y2 327 aaPredicted RBP16.05■□□□□ 0.16
RPAIN-213ENST00000573577 STK11IPQ8N1F8 1099 aa16.05■□□□□ 0.16
RPAIN-213ENST00000573577 ANKRD13CQ8N6S4 541 aa16.05■□□□□ 0.16
RPAIN-213ENST00000573577 ESYT1Q9BSJ8 1104 aa16.05■□□□□ 0.16
RPAIN-213ENST00000573577 IL25Q9H293 177 aa16.05■□□□□ 0.16
RPAIN-213ENST00000573577 ZSWIM8A7E2V4 1837 aa16.05■□□□□ 0.16
RPAIN-213ENST00000573577 ZNF213O14771 459 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms