RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 IRF6O14896 467 aa27.49■■□□□ 1.99
TVP23A-206ENST00000572980 ICA1Q05084 483 aa27.49■■□□□ 1.99
TVP23A-206ENST00000572980 IQCA1Q86XH1 822 aa27.49■■□□□ 1.99
TVP23A-206ENST00000572980 UPF2Q9HAU5 1272 aaKnown RBP27.49■■□□□ 1.99
TVP23A-206ENST00000572980 ZSWIM5Q9P217 1185 aa27.49■■□□□ 1.99
TVP23A-206ENST00000572980 CXCL11O14625 94 aa27.48■■□□□ 1.99
TVP23A-206ENST00000572980 GJA5P36382 358 aa27.48■■□□□ 1.99
TVP23A-206ENST00000572980 MKRN3Q13064 507 aaKnown RBP27.48■■□□□ 1.99
TVP23A-206ENST00000572980 SPP2Q13103 211 aa27.48■■□□□ 1.99
TVP23A-206ENST00000572980 ARHGEF10LQ9HCE6 1279 aa27.48■■□□□ 1.99
TVP23A-206ENST00000572980 TCP11L1Q9NUJ3 509 aa27.48■■□□□ 1.99
TVP23A-206ENST00000572980 SNX14Q9Y5W7 946 aa27.48■■□□□ 1.99
TVP23A-206ENST00000572980 IGKV6D-41A0A0C4DH26 115 aa27.48■■□□□ 1.99
TVP23A-206ENST00000572980 NOGQ13253 232 aa27.48■■□□□ 1.99
TVP23A-206ENST00000572980 CEP95Q96GE4 821 aa27.48■■□□□ 1.99
TVP23A-206ENST00000572980 NEK1Q96PY6 1258 aa27.48■■□□□ 1.99
TVP23A-206ENST00000572980 BACH2Q9BYV9 841 aa27.48■■□□□ 1.99
TVP23A-206ENST00000572980 MTMR4Q9NYA4 1195 aa27.48■■□□□ 1.99
TVP23A-206ENST00000572980 GREB1LQ9C091 1923 aaPredicted RBP27.47■■□□□ 1.99
TVP23A-206ENST00000572980 TRIM75PA6NK02 468 aa27.47■■□□□ 1.99
TVP23A-206ENST00000572980 GTF2A2P52657 109 aa27.47■■□□□ 1.99
TVP23A-206ENST00000572980 SNAPC2Q13487 334 aa27.47■■□□□ 1.99
TVP23A-206ENST00000572980 CCDC178Q5BJE1 867 aa27.47■■□□□ 1.99
TVP23A-206ENST00000572980 KCNH4Q9UQ05 1017 aa27.47■■□□□ 1.99
TVP23A-206ENST00000572980 USP17L10C9JJH3 530 aa27.46■■□□□ 1.99
TVP23A-206ENST00000572980 ATP2B2Q01814 1243 aa27.46■■□□□ 1.99
TVP23A-206ENST00000572980 SH2D4AQ9H788 454 aa27.46■■□□□ 1.99
TVP23A-206ENST00000572980 IL17RBQ9NRM6 502 aa27.46■■□□□ 1.99
TVP23A-206ENST00000572980 NYAP2Q9P242 653 aa27.46■■□□□ 1.99
TVP23A-206ENST00000572980 WDR33Q9C0J8 1336 aaKnown RBP27.46■■□□□ 1.99
TVP23A-206ENST00000572980 PHIPQ8WWQ0 1821 aa27.45■■□□□ 1.99
TVP23A-206ENST00000572980 TTLL1O95922 423 aa27.45■■□□□ 1.99
TVP23A-206ENST00000572980 EEF2P13639 858 aaKnown RBP27.45■■□□□ 1.99
TVP23A-206ENST00000572980 VEGFBP49765 207 aa27.45■■□□□ 1.99
TVP23A-206ENST00000572980 CLEC10AQ8IUN9 316 aa27.45■■□□□ 1.99
TVP23A-206ENST00000572980 NKX2-3Q8TAU0 364 aa27.45■■□□□ 1.99
TVP23A-206ENST00000572980 FEZ1Q99689 392 aa27.45■■□□□ 1.99
TVP23A-206ENST00000572980 UBAC1Q9BSL1 405 aa27.45■■□□□ 1.99
TVP23A-206ENST00000572980 C19orf81C9J6K1 198 aa27.44■■□□□ 1.98
TVP23A-206ENST00000572980 NMT2O60551 498 aa27.44■■□□□ 1.98
TVP23A-206ENST00000572980 HMGB1P09429 215 aaKnown RBP27.44■■□□□ 1.98
TVP23A-206ENST00000572980 PSMA5P28066 241 aa27.44■■□□□ 1.98
TVP23A-206ENST00000572980 MCM5P33992 734 aa27.44■■□□□ 1.98
TVP23A-206ENST00000572980 BACE1P56817 501 aa27.44■■□□□ 1.98
TVP23A-206ENST00000572980 ADCK5Q3MIX3 580 aa27.44■■□□□ 1.98
TVP23A-206ENST00000572980 SIAH1Q8IUQ4 282 aa27.44■■□□□ 1.98
TVP23A-206ENST00000572980 MB21D2Q8IYB1 491 aaPredicted RBP27.44■■□□□ 1.98
TVP23A-206ENST00000572980 TTC14Q96N46 770 aa27.44■■□□□ 1.98
TVP23A-206ENST00000572980 STX8Q9UNK0 236 aa27.44■■□□□ 1.98
TVP23A-206ENST00000572980 MANSC4A6NHS7 340 aaPredicted RBP27.43■■□□□ 1.98
TVP23A-206ENST00000572980 ANAPC15P60006 121 aa27.43■■□□□ 1.98
TVP23A-206ENST00000572980 CYB5R4Q7L1T6 521 aa27.43■■□□□ 1.98
TVP23A-206ENST00000572980 ACER1Q8TDN7 264 aa27.43■■□□□ 1.98
TVP23A-206ENST00000572980 ZSCAN10Q96SZ4 725 aaPredicted RBP27.43■■□□□ 1.98
TVP23A-206ENST00000572980 ZKSCAN3Q9BRR0 538 aa27.43■■□□□ 1.98
TVP23A-206ENST00000572980 KIAA1683Q9H0B3 1180 aa27.43■■□□□ 1.98
TVP23A-206ENST00000572980 CLIP2Q9UDT6 1046 aa27.43■■□□□ 1.98
TVP23A-206ENST00000572980 CETPP11597 493 aa27.43■■□□□ 1.98
TVP23A-206ENST00000572980 USP14P54578 494 aa27.43■■□□□ 1.98
TVP23A-206ENST00000572980 INHBEP58166 350 aa27.43■■□□□ 1.98
TVP23A-206ENST00000572980 MTMR2Q13614 643 aa27.43■■□□□ 1.98
TVP23A-206ENST00000572980 SART3Q15020 963 aaKnown RBP27.43■■□□□ 1.98
TVP23A-206ENST00000572980 JAKMIP1Q96N16 626 aaKnown RBP27.43■■□□□ 1.98
TVP23A-206ENST00000572980 TMX2Q9Y320 296 aa27.43■■□□□ 1.98
TVP23A-206ENST00000572980 MAP2K2P36507 400 aa27.42■■□□□ 1.98
TVP23A-206ENST00000572980 DGKHQ86XP1 1220 aa27.42■■□□□ 1.98
TVP23A-206ENST00000572980 MKL1Q969V6 931 aa27.42■■□□□ 1.98
TVP23A-206ENST00000572980 MS4A4AQ96JQ5 239 aa27.42■■□□□ 1.98
TVP23A-206ENST00000572980 A0A0G2JLL6 359 aaPredicted RBP27.41■■□□□ 1.98
TVP23A-206ENST00000572980 A0A1W2PRG0 241 aa27.41■■□□□ 1.98
TVP23A-206ENST00000572980 ERICH2A1L162 156 aa27.41■■□□□ 1.98
TVP23A-206ENST00000572980 NOVP48745 357 aa27.41■■□□□ 1.98
TVP23A-206ENST00000572980 KIF23Q02241 960 aaPredicted RBP27.41■■□□□ 1.98
TVP23A-206ENST00000572980 SH3D19Q5HYK7 790 aa27.41■■□□□ 1.98
TVP23A-206ENST00000572980 FASTKD5Q7L8L6 764 aaKnown RBP27.41■■□□□ 1.98
TVP23A-206ENST00000572980 PRRT2Q7Z6L0 340 aaPredicted RBP27.41■■□□□ 1.98
TVP23A-206ENST00000572980 REM2Q8IYK8 340 aaPredicted RBP27.41■■□□□ 1.98
TVP23A-206ENST00000572980 MTA3Q9BTC8 594 aa27.41■■□□□ 1.98
TVP23A-206ENST00000572980 SYNPO2Q9UMS6 1093 aa27.41■■□□□ 1.98
TVP23A-206ENST00000572980 AOC2O75106 756 aa27.4■■□□□ 1.98
TVP23A-206ENST00000572980 SREBF2Q12772 1141 aa27.4■■□□□ 1.98
TVP23A-206ENST00000572980 USP17L2Q6R6M4 530 aa27.4■■□□□ 1.98
TVP23A-206ENST00000572980 DHX32Q7L7V1 743 aaKnown RBP27.4■■□□□ 1.98
TVP23A-206ENST00000572980 C22orf23Q9BZE7 217 aa27.4■■□□□ 1.98
TVP23A-206ENST00000572980 TMOD4Q9NZQ9 345 aa27.4■■□□□ 1.98
TVP23A-206ENST00000572980 TNKSO95271 1327 aa27.4■■□□□ 1.98
TVP23A-206ENST00000572980 CCL15-CCL14A0A0B4J2E2 113 aa27.39■■□□□ 1.98
TVP23A-206ENST00000572980 IFIT3O14879 490 aaKnown RBP27.39■■□□□ 1.98
TVP23A-206ENST00000572980 PRC1O43663 620 aa27.39■■□□□ 1.98
TVP23A-206ENST00000572980 HMGCS2P54868 508 aa27.39■■□□□ 1.98
TVP23A-206ENST00000572980 CCL15Q16663 113 aa27.39■■□□□ 1.98
TVP23A-206ENST00000572980 BLOC1S2Q6QNY1 142 aa27.39■■□□□ 1.98
TVP23A-206ENST00000572980 CHST3Q7LGC8 479 aa27.39■■□□□ 1.98
TVP23A-206ENST00000572980 ZYXQ15942 572 aaKnown RBP27.39■■□□□ 1.97
TVP23A-206ENST00000572980 TMEM87BQ96K49 555 aa27.39■■□□□ 1.97
TVP23A-206ENST00000572980 TM6SF1Q9BZW5 370 aa27.39■■□□□ 1.97
TVP23A-206ENST00000572980 GOPCQ9HD26 462 aa27.39■■□□□ 1.97
TVP23A-206ENST00000572980 WDR19Q8NEZ3 1342 aa27.38■■□□□ 1.97
TVP23A-206ENST00000572980 TESPA1A2RU30 521 aaPredicted RBP27.38■■□□□ 1.97
TVP23A-206ENST00000572980 TOP1P11387 765 aaKnown RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms