RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 RPAP2Q8IXW5 612 aaPredicted RBP9.12□□□□□ -0.95
NUP88-205ENST00000572809 CHMP4BQ9H444 224 aaKnown RBP9.12□□□□□ -0.95
NUP88-205ENST00000572809 ELP3Q9H9T3 547 aa9.12□□□□□ -0.95
NUP88-205ENST00000572809 DDX19BQ9UMR2 479 aa9.12□□□□□ -0.95
NUP88-205ENST00000572809 MYH13Q9UKX3 1938 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 ALDH1A1P00352 501 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 GJA5P36382 358 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 MCAMP43121 646 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 SMCPP49901 116 aaPredicted RBP9.11□□□□□ -0.95
NUP88-205ENST00000572809 GSTO1P78417 241 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 NFIAQ12857 509 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 DGKZQ13574 1117 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 VGLL4Q14135 290 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 TUSC1Q2TAM9 212 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 DCAF15Q66K64 600 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 PI16Q6UXB8 463 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 MIGA2Q7L4E1 593 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.11□□□□□ -0.95
NUP88-205ENST00000572809 BANK1Q8NDB2 785 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.11□□□□□ -0.95
NUP88-205ENST00000572809 OPTNQ96CV9 577 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 ABHD8Q96I13 439 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 ZNF512BQ96KM6 892 aaPredicted RBP9.11□□□□□ -0.95
NUP88-205ENST00000572809 DBNDD2Q9BQY9 259 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 IDI2Q9BXS1 227 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 CCDC8Q9H0W5 538 aaPredicted RBP9.11□□□□□ -0.95
NUP88-205ENST00000572809 SNRKQ9NRH2 765 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 RAI14Q9P0K7 980 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 LRP2BPQ9P2M1 347 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 FCF1Q9Y324 198 aaKnown RBP9.11□□□□□ -0.95
NUP88-205ENST00000572809 CSADQ9Y600 493 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 CASP8AP2Q9UKL3 1982 aa9.11□□□□□ -0.95
NUP88-205ENST00000572809 GAKO14976 1311 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 GPR75-ASB3A0A0A6YYF3 556 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 GPR25O00155 361 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 RAD21O60216 631 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 ENTPD3O75355 529 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 BTDP43251 543 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 PDE3AQ14432 1141 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 HSP90AB4PQ58FF6 505 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 OTUD7BQ6GQQ9 843 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 ERC1Q8IUD2 1116 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 ZFPM1Q8IX07 1006 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 RDH13Q8NBN7 331 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 ZKSCAN4Q969J2 545 aaPredicted RBP9.1□□□□□ -0.95
NUP88-205ENST00000572809 NSUN4Q96CB9 384 aaKnown RBP9.1□□□□□ -0.95
NUP88-205ENST00000572809 EAF2Q96CJ1 260 aaPredicted RBP9.1□□□□□ -0.95
NUP88-205ENST00000572809 WRNIP1Q96S55 665 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 CFHR5Q9BXR6 569 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 ZNF341Q9BYN7 854 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 MCOLN1Q9GZU1 580 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 ZBTB40Q9NUA8 1239 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 EXOC6BQ9Y2D4 811 aa9.1□□□□□ -0.95
NUP88-205ENST00000572809 MROH7-TTC4A0A0A0MT08 1334 aa9.09□□□□□ -0.95
NUP88-205ENST00000572809 IGF2BP3O00425 579 aaKnown RBP eCLIP9.09□□□□□ -0.95
NUP88-205ENST00000572809 SPTLC1O15269 473 aa9.09□□□□□ -0.95
NUP88-205ENST00000572809 HMMRO75330 724 aa9.09□□□□□ -0.95
NUP88-205ENST00000572809 RGS3P49796 1198 aa9.09□□□□□ -0.95
NUP88-205ENST00000572809 GTF2A2P52657 109 aa9.09□□□□□ -0.95
NUP88-205ENST00000572809 MCM6Q14566 821 aa9.09□□□□□ -0.95
NUP88-205ENST00000572809 NOM1Q5C9Z4 860 aaKnown RBP9.09□□□□□ -0.95
NUP88-205ENST00000572809 PPP2R2DQ66LE6 453 aa9.09□□□□□ -0.95
NUP88-205ENST00000572809 ERO1BQ86YB8 467 aa9.09□□□□□ -0.95
NUP88-205ENST00000572809 ZSCAN29Q8IWY8 852 aaPredicted RBP9.09□□□□□ -0.95
NUP88-205ENST00000572809 RHPN1Q8TCX5 695 aa9.09□□□□□ -0.95
NUP88-205ENST00000572809 ZNF384Q8TF68 577 aa9.09□□□□□ -0.95
NUP88-205ENST00000572809 ZNF296Q8WUU4 475 aaPredicted RBP9.09□□□□□ -0.95
NUP88-205ENST00000572809 PTPN18Q99952 460 aa9.09□□□□□ -0.95
NUP88-205ENST00000572809 R3HDMLQ9H3Y0 253 aa9.09□□□□□ -0.95
NUP88-205ENST00000572809 ZNF112Q9UJU3 913 aa9.09□□□□□ -0.95
NUP88-205ENST00000572809 RPAP1Q9BWH6 1393 aaPredicted RBP9.09□□□□□ -0.95
NUP88-205ENST00000572809 MYH2Q9UKX2 1941 aa9.08□□□□□ -0.96
NUP88-205ENST00000572809 TTC24A2A3L6 582 aaPredicted RBP9.08□□□□□ -0.96
NUP88-205ENST00000572809 SPDYE5A6NIY4 337 aa9.08□□□□□ -0.96
NUP88-205ENST00000572809 CCDC85CA6NKD9 419 aa9.08□□□□□ -0.96
NUP88-205ENST00000572809 FKTNO75072 461 aa9.08□□□□□ -0.96
NUP88-205ENST00000572809 WDHD1O75717 1129 aaPredicted RBP9.08□□□□□ -0.96
NUP88-205ENST00000572809 MAP4K4O95819 1239 aaPredicted RBP9.08□□□□□ -0.96
NUP88-205ENST00000572809 CYP2E1P05181 493 aaPredicted RBP9.08□□□□□ -0.96
NUP88-205ENST00000572809 INPP5BP32019 993 aa9.08□□□□□ -0.96
NUP88-205ENST00000572809 RFC5P40937 340 aa9.08□□□□□ -0.96
NUP88-205ENST00000572809 ZAP70P43403 619 aa9.08□□□□□ -0.96
NUP88-205ENST00000572809 RHBDL3P58872 404 aa9.08□□□□□ -0.96
NUP88-205ENST00000572809 PICALMQ13492 652 aa9.08□□□□□ -0.96
NUP88-205ENST00000572809 C20orf194Q5TEA3 1177 aa9.08□□□□□ -0.96
NUP88-205ENST00000572809 CTU1Q7Z7A3 348 aaKnown RBP9.08□□□□□ -0.96
NUP88-205ENST00000572809 AACSQ86V21 672 aa9.08□□□□□ -0.96
NUP88-205ENST00000572809 SIRT2Q8IXJ6 389 aa9.08□□□□□ -0.96
NUP88-205ENST00000572809 TLR7Q9NYK1 1049 aaKnown RBP9.08□□□□□ -0.96
NUP88-205ENST00000572809 DBNLQ9UJU6 430 aaKnown RBP9.08□□□□□ -0.96
NUP88-205ENST00000572809 SNCAIPQ9Y6H5 919 aa9.08□□□□□ -0.96
NUP88-205ENST00000572809 CCL15-CCL14A0A0B4J2E2 113 aa9.07□□□□□ -0.96
NUP88-205ENST00000572809 DDTLA6NHG4 134 aaPredicted RBP9.07□□□□□ -0.96
NUP88-205ENST00000572809 APBB1O00213 710 aa9.07□□□□□ -0.96
NUP88-205ENST00000572809 IGSF3O75054 1194 aa9.07□□□□□ -0.96
NUP88-205ENST00000572809 RAB11FIP3O75154 756 aa9.07□□□□□ -0.96
NUP88-205ENST00000572809 BAG3O95817 575 aa9.07□□□□□ -0.96
NUP88-205ENST00000572809 CETPP11597 493 aa9.07□□□□□ -0.96
NUP88-205ENST00000572809 MAP3K10Q02779 954 aa9.07□□□□□ -0.96
NUP88-205ENST00000572809 PPATQ06203 517 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms