RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 GTF3C2Q8WUA4 911 aaPredicted RBP16.61■□□□□ 0.25
RPAIN-211ENST00000572174 KIAA1683Q9H0B3 1180 aa16.61■□□□□ 0.25
RPAIN-211ENST00000572174 EPB41L4AQ9HCS5 686 aaPredicted RBP16.61■□□□□ 0.25
RPAIN-211ENST00000572174 GNRH1P01148 92 aa16.6■□□□□ 0.25
RPAIN-211ENST00000572174 PCP11498 1178 aaKnown RBP16.6■□□□□ 0.25
RPAIN-211ENST00000572174 NT5C2P49902 561 aa16.6■□□□□ 0.25
RPAIN-211ENST00000572174 IRX3P78415 501 aaPredicted RBP16.6■□□□□ 0.25
RPAIN-211ENST00000572174 PPARAQ07869 468 aa16.6■□□□□ 0.25
RPAIN-211ENST00000572174 MOGSQ13724 837 aa16.6■□□□□ 0.25
RPAIN-211ENST00000572174 DYNLL2Q96FJ2 89 aa16.6■□□□□ 0.25
RPAIN-211ENST00000572174 FAM227BQ96M60 508 aa16.6■□□□□ 0.25
RPAIN-211ENST00000572174 KANSL2Q9H9L4 492 aa16.6■□□□□ 0.25
RPAIN-211ENST00000572174 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.6■□□□□ 0.25
RPAIN-211ENST00000572174 CYP2D7A0A087X1C5 515 aa16.59■□□□□ 0.25
RPAIN-211ENST00000572174 GCLCP48506 637 aaPredicted RBP16.59■□□□□ 0.25
RPAIN-211ENST00000572174 ICA1Q05084 483 aa16.59■□□□□ 0.25
RPAIN-211ENST00000572174 GPAT2Q6NUI2 795 aa16.59■□□□□ 0.25
RPAIN-211ENST00000572174 CWC27Q6UX04 472 aaKnown RBP16.59■□□□□ 0.25
RPAIN-211ENST00000572174 CCDC84Q86UT8 332 aaPredicted RBP16.59■□□□□ 0.25
RPAIN-211ENST00000572174 ZNF444Q8N0Y2 327 aaPredicted RBP16.59■□□□□ 0.25
RPAIN-211ENST00000572174 SLC44A5Q8NCS7 719 aa16.59■□□□□ 0.25
RPAIN-211ENST00000572174 LPAR1Q92633 364 aa16.59■□□□□ 0.25
RPAIN-211ENST00000572174 C12orf42Q96LP6 360 aa16.59■□□□□ 0.25
RPAIN-211ENST00000572174 HOXA7P31268 230 aaPredicted RBP16.58■□□□□ 0.24
RPAIN-211ENST00000572174 DGKZQ13574 1117 aa16.58■□□□□ 0.24
RPAIN-211ENST00000572174 SEPT2Q15019 361 aa16.58■□□□□ 0.24
RPAIN-211ENST00000572174 CCDC129Q6ZRS4 1044 aa16.58■□□□□ 0.24
RPAIN-211ENST00000572174 ANAPC4Q9UJX5 808 aa16.58■□□□□ 0.24
RPAIN-211ENST00000572174 PLIN4Q96Q06 1357 aa16.58■□□□□ 0.24
RPAIN-211ENST00000572174 PARP14Q460N5 1801 aa16.58■□□□□ 0.24
RPAIN-211ENST00000572174 ADGRA2Q96PE1 1338 aa16.57■□□□□ 0.24
RPAIN-211ENST00000572174 HSPD1P10809 573 aaKnown RBP16.57■□□□□ 0.24
RPAIN-211ENST00000572174 GSPT1P15170 499 aaKnown RBP16.57■□□□□ 0.24
RPAIN-211ENST00000572174 RASA1P20936 1047 aa16.57■□□□□ 0.24
RPAIN-211ENST00000572174 RNF41Q9H4P4 317 aaPredicted RBP16.57■□□□□ 0.24
RPAIN-211ENST00000572174 GOPCQ9HD26 462 aa16.57■□□□□ 0.24
RPAIN-211ENST00000572174 CTNNA3Q9UI47 895 aa16.57■□□□□ 0.24
RPAIN-211ENST00000572174 SYNPO2Q9UMS6 1093 aa16.57■□□□□ 0.24
RPAIN-211ENST00000572174 TSPY3P0CV98 308 aa16.56■□□□□ 0.24
RPAIN-211ENST00000572174 TSPY8P0CW00 308 aa16.56■□□□□ 0.24
RPAIN-211ENST00000572174 AKR1B1P15121 316 aa16.56■□□□□ 0.24
RPAIN-211ENST00000572174 HOXD10P28358 340 aa16.56■□□□□ 0.24
RPAIN-211ENST00000572174 JAG1P78504 1218 aa16.56■□□□□ 0.24
RPAIN-211ENST00000572174 ZNF589Q86UQ0 364 aaPredicted RBP16.56■□□□□ 0.24
RPAIN-211ENST00000572174 DSCC1Q9BVC3 393 aa16.56■□□□□ 0.24
RPAIN-211ENST00000572174 USP17L15C9J2P7 530 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 USP17L13C9JLJ4 530 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 USP17L11C9JVI0 530 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 USP17L18D6R9N7 530 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 USP17L22D6RA61 530 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 USP17L17D6RBQ6 530 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 USP17L19D6RCP7 530 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 USP17L20D6RJB6 530 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 GUCY1A2P33402 732 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 PRMT2P55345 433 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 LACTBP83111 547 aaPredicted RBP16.55■□□□□ 0.24
RPAIN-211ENST00000572174 USP17L24Q0WX57 530 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 FAM110CQ1W6H9 321 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 BMP2KLQ5H9B9 411 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 TREML2Q5T2D2 321 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 CASC1Q6TDU7 716 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 C17orf99Q6UX52 265 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 ASCC2Q9H1I8 757 aaPredicted RBP16.55■□□□□ 0.24
RPAIN-211ENST00000572174 R3HDMLQ9H3Y0 253 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 EFCC1Q9HA90 598 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 PPP4R2Q9NY27 417 aa16.55■□□□□ 0.24
RPAIN-211ENST00000572174 FGAP02671 866 aa16.54■□□□□ 0.24
RPAIN-211ENST00000572174 CYP2C8P10632 490 aa16.54■□□□□ 0.24
RPAIN-211ENST00000572174 BCRP11274 1271 aa16.54■□□□□ 0.24
RPAIN-211ENST00000572174 EVX2Q03828 476 aa16.54■□□□□ 0.24
RPAIN-211ENST00000572174 ZYXQ15942 572 aaKnown RBP16.54■□□□□ 0.24
RPAIN-211ENST00000572174 SHROOM1Q2M3G4 852 aaPredicted RBP16.54■□□□□ 0.24
RPAIN-211ENST00000572174 VPS53Q5VIR6 699 aa16.54■□□□□ 0.24
RPAIN-211ENST00000572174 NYAP2Q9P242 653 aa16.54■□□□□ 0.24
RPAIN-211ENST00000572174 TMX2Q9Y320 296 aa16.54■□□□□ 0.24
RPAIN-211ENST00000572174 TRIM17Q9Y577 477 aa16.54■□□□□ 0.24
RPAIN-211ENST00000572174 DOCK3Q8IZD9 2030 aa16.53■□□□□ 0.24
RPAIN-211ENST00000572174 TSPY2A6NKD2 308 aa16.53■□□□□ 0.24
RPAIN-211ENST00000572174 WDR46O15213 610 aaKnown RBP16.53■□□□□ 0.24
RPAIN-211ENST00000572174 FOXP2O15409 715 aa16.53■□□□□ 0.24
RPAIN-211ENST00000572174 ORC4O43929 436 aa16.53■□□□□ 0.24
RPAIN-211ENST00000572174 VCAM1P19320 739 aa16.53■□□□□ 0.24
RPAIN-211ENST00000572174 FCGRTP55899 365 aa16.53■□□□□ 0.24
RPAIN-211ENST00000572174 IMMTQ16891 758 aaKnown RBP16.53■□□□□ 0.24
RPAIN-211ENST00000572174 FBXO46Q6PJ61 603 aaPredicted RBP16.53■□□□□ 0.24
RPAIN-211ENST00000572174 CD99L2Q8TCZ2 262 aa16.53■□□□□ 0.24
RPAIN-211ENST00000572174 MCOLN1Q9GZU1 580 aa16.53■□□□□ 0.24
RPAIN-211ENST00000572174 VCPKMTQ9H867 229 aa16.53■□□□□ 0.24
RPAIN-211ENST00000572174 EMILIN3Q9NT22 766 aa16.53■□□□□ 0.24
RPAIN-211ENST00000572174 CPA4Q9UI42 421 aa16.53■□□□□ 0.24
RPAIN-211ENST00000572174 A0A0G2JMZ2 1700 aa16.53■□□□□ 0.24
RPAIN-211ENST00000572174 COL11A1P12107 1806 aaPredicted RBP16.52■□□□□ 0.24
RPAIN-211ENST00000572174 MYPNQ86TC9 1320 aa16.52■□□□□ 0.24
RPAIN-211ENST00000572174 ZNF213O14771 459 aa16.52■□□□□ 0.24
RPAIN-211ENST00000572174 TTLL1O95922 423 aa16.52■□□□□ 0.24
RPAIN-211ENST00000572174 EEF2P13639 858 aaKnown RBP16.52■□□□□ 0.24
RPAIN-211ENST00000572174 CHMLP26374 656 aa16.52■□□□□ 0.24
RPAIN-211ENST00000572174 ATP2B2Q01814 1243 aa16.52■□□□□ 0.24
RPAIN-211ENST00000572174 MFSD6Q6ZSS7 791 aa16.52■□□□□ 0.24
RPAIN-211ENST00000572174 NEDD1Q8NHV4 660 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms