RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 MPHOSPH10O00566 681 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-213ENST00000571886 APPP05067 770 aa12.27□□□□□ -0.45
GTF3C1-213ENST00000571886 KIAA1755Q5JYT7 1200 aa12.27□□□□□ -0.45
GTF3C1-213ENST00000571886 USP17L2Q6R6M4 530 aa12.27□□□□□ -0.45
GTF3C1-213ENST00000571886 TRIM47Q96LD4 638 aa12.27□□□□□ -0.45
GTF3C1-213ENST00000571886 P2RX7Q99572 595 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-213ENST00000571886 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.27□□□□□ -0.45
GTF3C1-213ENST00000571886 ASCC2Q9H1I8 757 aaPredicted RBP12.27□□□□□ -0.45
GTF3C1-213ENST00000571886 SWAP70Q9UH65 585 aa12.27□□□□□ -0.45
GTF3C1-213ENST00000571886 TACC3Q9Y6A5 838 aa12.27□□□□□ -0.45
GTF3C1-213ENST00000571886 HOXA7P31268 230 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-213ENST00000571886 PSMC4P43686 418 aa12.26□□□□□ -0.45
GTF3C1-213ENST00000571886 NMIQ13287 307 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-213ENST00000571886 LRRFIP1Q32MZ4 808 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-213ENST00000571886 GIMAP6Q6P9H5 292 aa12.26□□□□□ -0.45
GTF3C1-213ENST00000571886 ANKRD13CQ8N6S4 541 aa12.26□□□□□ -0.45
GTF3C1-213ENST00000571886 DDRGK1Q96HY6 314 aa12.26□□□□□ -0.45
GTF3C1-213ENST00000571886 INCENPQ9NQS7 918 aa12.26□□□□□ -0.45
GTF3C1-213ENST00000571886 TMOD4Q9NZQ9 345 aa12.26□□□□□ -0.45
GTF3C1-213ENST00000571886 ARPP21Q9UBL0 812 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-213ENST00000571886 PTCH2Q9Y6C5 1203 aa12.26□□□□□ -0.45
GTF3C1-213ENST00000571886 GNAT2P19087 354 aa12.25□□□□□ -0.45
GTF3C1-213ENST00000571886 SDSP20132 328 aa12.25□□□□□ -0.45
GTF3C1-213ENST00000571886 RASA1P20936 1047 aa12.25□□□□□ -0.45
GTF3C1-213ENST00000571886 OSBPP22059 807 aa12.25□□□□□ -0.45
GTF3C1-213ENST00000571886 TDO2P48775 406 aa12.25□□□□□ -0.45
GTF3C1-213ENST00000571886 TMEM179Q6ZVK1 233 aa12.25□□□□□ -0.45
GTF3C1-213ENST00000571886 ZNF589Q86UQ0 364 aaPredicted RBP12.25□□□□□ -0.45
GTF3C1-213ENST00000571886 SMCR8Q8TEV9 937 aaPredicted RBP12.25□□□□□ -0.45
GTF3C1-213ENST00000571886 C12orf42Q96LP6 360 aa12.25□□□□□ -0.45
GTF3C1-213ENST00000571886 KIAA1683Q9H0B3 1180 aa12.25□□□□□ -0.45
GTF3C1-213ENST00000571886 TXNRD2Q9NNW7 524 aa12.25□□□□□ -0.45
GTF3C1-213ENST00000571886 GABRQQ9UN88 632 aa12.25□□□□□ -0.45
GTF3C1-213ENST00000571886 PRDM1O75626 825 aa12.24□□□□□ -0.45
GTF3C1-213ENST00000571886 GSPT1P15170 499 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-213ENST00000571886 SOX10P56693 466 aa12.24□□□□□ -0.45
GTF3C1-213ENST00000571886 KIF22Q14807 665 aa12.24□□□□□ -0.45
GTF3C1-213ENST00000571886 Q3C1V9 767 aa12.24□□□□□ -0.45
GTF3C1-213ENST00000571886 MCMDC2Q4G0Z9 681 aa12.24□□□□□ -0.45
GTF3C1-213ENST00000571886 SKAP1Q86WV1 359 aa12.24□□□□□ -0.45
GTF3C1-213ENST00000571886 AMOTL1Q8IY63 956 aa12.24□□□□□ -0.45
GTF3C1-213ENST00000571886 CCDC17Q96LX7 622 aa12.24□□□□□ -0.45
GTF3C1-213ENST00000571886 FEZ1Q99689 392 aa12.24□□□□□ -0.45
GTF3C1-213ENST00000571886 GREB1LQ9C091 1923 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-213ENST00000571886 HELLSQ9NRZ9 838 aa12.24□□□□□ -0.45
GTF3C1-213ENST00000571886 ROBO3Q96MS0 1386 aa12.23□□□□□ -0.45
GTF3C1-213ENST00000571886 FMNL1O95466 1100 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-213ENST00000571886 EEF2P13639 858 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-213ENST00000571886 VCAM1P19320 739 aa12.23□□□□□ -0.45
GTF3C1-213ENST00000571886 HERVK_113P62684 666 aa12.23□□□□□ -0.45
GTF3C1-213ENST00000571886 IRX3P78415 501 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-213ENST00000571886 CTDSPL2Q05D32 466 aa12.23□□□□□ -0.45
GTF3C1-213ENST00000571886 PPARAQ07869 468 aa12.23□□□□□ -0.45
GTF3C1-213ENST00000571886 PABPC4Q13310 644 aaKnown RBP eCLIP12.23□□□□□ -0.45
GTF3C1-213ENST00000571886 CATSPERGQ6ZRH7 1159 aa12.23□□□□□ -0.45
GTF3C1-213ENST00000571886 NAPBQ9H115 298 aa12.23□□□□□ -0.45
GTF3C1-213ENST00000571886 RBPJLQ9UBG7 517 aa12.23□□□□□ -0.45
GTF3C1-213ENST00000571886 PNMA3Q9UL41 463 aa12.23□□□□□ -0.45
GTF3C1-213ENST00000571886 RLFQ13129 1914 aa12.23□□□□□ -0.45
GTF3C1-213ENST00000571886 CNMDO75829 334 aa12.22□□□□□ -0.45
GTF3C1-213ENST00000571886 HSPD1P10809 573 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-213ENST00000571886 USP14P54578 494 aa12.22□□□□□ -0.45
GTF3C1-213ENST00000571886 ICA1Q05084 483 aa12.22□□□□□ -0.45
GTF3C1-213ENST00000571886 PRKCZQ05513 592 aa12.22□□□□□ -0.45
GTF3C1-213ENST00000571886 FAM110CQ1W6H9 321 aa12.22□□□□□ -0.45
GTF3C1-213ENST00000571886 NKX2-3Q8TAU0 364 aa12.22□□□□□ -0.45
GTF3C1-213ENST00000571886 SH3TC2Q8TF17 1288 aa12.22□□□□□ -0.45
GTF3C1-213ENST00000571886 IL25Q9H293 177 aa12.22□□□□□ -0.45
GTF3C1-213ENST00000571886 RPAP3Q9H6T3 665 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-213ENST00000571886 MKNK2Q9HBH9 465 aa12.22□□□□□ -0.45
GTF3C1-213ENST00000571886 SRRDQ9UH36 339 aa12.22□□□□□ -0.45
GTF3C1-213ENST00000571886 TAOK2Q9UL54 1235 aa12.22□□□□□ -0.45
GTF3C1-213ENST00000571886 TMX2Q9Y320 296 aa12.22□□□□□ -0.45
GTF3C1-213ENST00000571886 HTTP42858 3142 aa12.22□□□□□ -0.45
GTF3C1-213ENST00000571886 PLXNB2O15031 1838 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 IGKV6D-41A0A0C4DH26 115 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 USP17L15C9J2P7 530 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 USP17L13C9JLJ4 530 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 USP17L11C9JVI0 530 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 USP17L18D6R9N7 530 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 USP17L22D6RA61 530 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 USP17L17D6RBQ6 530 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 USP17L19D6RCP7 530 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 USP17L20D6RJB6 530 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 FGAP02671 866 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 GCLCP48506 637 aaPredicted RBP12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 FCGRTP55899 365 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 ATP2B2Q01814 1243 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 USP17L24Q0WX57 530 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 ARHGEF6Q15052 776 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 FAM47AQ5JRC9 791 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 TTC22Q5TAA0 569 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 CWC27Q6UX04 472 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 SPICE1Q8N0Z3 855 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 NACAP1Q9BZK3 213 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 MORF4L1Q9UBU8 362 aa12.21□□□□□ -0.45
GTF3C1-213ENST00000571886 MYH4Q9Y623 1939 aa12.21□□□□□ -0.46
GTF3C1-213ENST00000571886 CCDC171Q6TFL3 1326 aa12.2□□□□□ -0.46
GTF3C1-213ENST00000571886 MYPNQ86TC9 1320 aa12.2□□□□□ -0.46
GTF3C1-213ENST00000571886 POTEFA5A3E0 1075 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms