RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 MORN1Q5T089 497 aa18.87■□□□□ 0.61
TSR1-202ENST00000571806 LBX2Q6XYB7 198 aa18.87■□□□□ 0.61
TSR1-202ENST00000571806 CLASRPQ8N2M8 674 aaKnown RBP18.87■□□□□ 0.61
TSR1-202ENST00000571806 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.87■□□□□ 0.61
TSR1-202ENST00000571806 PAGR1Q9BTK6 254 aa18.87■□□□□ 0.61
TSR1-202ENST00000571806 ANTXR1Q9H6X2 564 aa18.87■□□□□ 0.61
TSR1-202ENST00000571806 EXOC6BQ9Y2D4 811 aa18.87■□□□□ 0.61
TSR1-202ENST00000571806 SHROOM1Q2M3G4 852 aaPredicted RBP18.86■□□□□ 0.61
TSR1-202ENST00000571806 CATSPERGQ6ZRH7 1159 aa18.86■□□□□ 0.61
TSR1-202ENST00000571806 RPAP2Q8IXW5 612 aaPredicted RBP18.86■□□□□ 0.61
TSR1-202ENST00000571806 RHPN1Q8TCX5 695 aa18.86■□□□□ 0.61
TSR1-202ENST00000571806 DIS3LQ8TF46 1054 aaKnown RBP18.86■□□□□ 0.61
TSR1-202ENST00000571806 KIF1BPQ96EK5 621 aa18.86■□□□□ 0.61
TSR1-202ENST00000571806 APBA2Q99767 749 aa18.86■□□□□ 0.61
TSR1-202ENST00000571806 RIOK1Q9BRS2 568 aaKnown RBP18.86■□□□□ 0.61
TSR1-202ENST00000571806 CRNKL1Q9BZJ0 848 aaKnown RBP18.86■□□□□ 0.61
TSR1-202ENST00000571806 TRIOBPQ9H2D6 2365 aa18.85■□□□□ 0.61
TSR1-202ENST00000571806 ZBED9Q6R2W3 1325 aa18.85■□□□□ 0.61
TSR1-202ENST00000571806 MAGEB6P1A0A0J9YX57 407 aa18.85■□□□□ 0.61
TSR1-202ENST00000571806 HMMRO75330 724 aa18.85■□□□□ 0.61
TSR1-202ENST00000571806 POLR3DP05423 398 aaPredicted RBP18.85■□□□□ 0.61
TSR1-202ENST00000571806 SLC9C2Q5TAH2 1124 aa18.85■□□□□ 0.61
TSR1-202ENST00000571806 PORCNQ9H237 461 aa18.85■□□□□ 0.61
TSR1-202ENST00000571806 CHMP4BQ9H444 224 aaKnown RBP18.85■□□□□ 0.61
TSR1-202ENST00000571806 RANBP2P49792 3224 aaKnown RBP18.85■□□□□ 0.61
TSR1-202ENST00000571806 CACNB2Q08289 660 aaPredicted RBP18.84■□□□□ 0.61
TSR1-202ENST00000571806 MAP2K5Q13163 448 aa18.84■□□□□ 0.61
TSR1-202ENST00000571806 ZYXQ15942 572 aaKnown RBP18.84■□□□□ 0.61
TSR1-202ENST00000571806 EDC3Q96F86 508 aaKnown RBP18.84■□□□□ 0.61
TSR1-202ENST00000571806 STAP2Q9UGK3 403 aa18.84■□□□□ 0.61
TSR1-202ENST00000571806 NDUFB9Q9Y6M9 179 aa18.84■□□□□ 0.61
TSR1-202ENST00000571806 SLC15A5A6NIM6 579 aa18.83■□□□□ 0.6
TSR1-202ENST00000571806 IFIT2P09913 472 aaKnown RBP18.83■□□□□ 0.6
TSR1-202ENST00000571806 VCAM1P19320 739 aa18.83■□□□□ 0.6
TSR1-202ENST00000571806 SHMT1P34896 483 aa18.83■□□□□ 0.6
TSR1-202ENST00000571806 MNX1P50219 401 aaPredicted RBP18.83■□□□□ 0.6
TSR1-202ENST00000571806 PLCD1P51178 756 aa18.83■□□□□ 0.6
TSR1-202ENST00000571806 C7orf61Q8IZ16 206 aa18.83■□□□□ 0.6
TSR1-202ENST00000571806 GDF15Q99988 308 aa18.83■□□□□ 0.6
TSR1-202ENST00000571806 IVNS1ABPQ9Y6Y0 642 aa18.83■□□□□ 0.6
TSR1-202ENST00000571806 SZT2Q5T011 3432 aa18.83■□□□□ 0.6
TSR1-202ENST00000571806 DDX60LQ5H9U9 1706 aaKnown RBP18.83■□□□□ 0.6
TSR1-202ENST00000571806 PEX10O60683 326 aa18.82■□□□□ 0.6
TSR1-202ENST00000571806 RAB11FIP3O75154 756 aa18.82■□□□□ 0.6
TSR1-202ENST00000571806 PDE6AP16499 860 aa18.82■□□□□ 0.6
TSR1-202ENST00000571806 GABPAQ06546 454 aa18.82■□□□□ 0.6
TSR1-202ENST00000571806 MFSD14CQ5VZR4 134 aa18.82■□□□□ 0.6
TSR1-202ENST00000571806 GPR153Q6NV75 609 aa18.82■□□□□ 0.6
TSR1-202ENST00000571806 POTEEQ6S8J3 1075 aa18.82■□□□□ 0.6
TSR1-202ENST00000571806 PANK1Q8TE04 598 aa18.82■□□□□ 0.6
TSR1-202ENST00000571806 IL1RAPL2Q9NP60 686 aa18.82■□□□□ 0.6
TSR1-202ENST00000571806 MCM9Q9NXL9 1143 aa18.82■□□□□ 0.6
TSR1-202ENST00000571806 HOXC10Q9NYD6 342 aa18.82■□□□□ 0.6
TSR1-202ENST00000571806 DDX19BQ9UMR2 479 aa18.82■□□□□ 0.6
TSR1-202ENST00000571806 ALPK3Q96L96 1907 aa18.82■□□□□ 0.6
TSR1-202ENST00000571806 MSCO60682 206 aa18.81■□□□□ 0.6
TSR1-202ENST00000571806 CNMDO75829 334 aa18.81■□□□□ 0.6
TSR1-202ENST00000571806 HOXC6P09630 235 aa18.81■□□□□ 0.6
TSR1-202ENST00000571806 PTPREP23469 700 aa18.81■□□□□ 0.6
TSR1-202ENST00000571806 LHX8Q68G74 356 aa18.81■□□□□ 0.6
TSR1-202ENST00000571806 MIER1Q8N108 512 aa18.81■□□□□ 0.6
TSR1-202ENST00000571806 SWAP70Q9UH65 585 aa18.81■□□□□ 0.6
TSR1-202ENST00000571806 ZNF532Q9HCE3 1301 aa18.8■□□□□ 0.6
TSR1-202ENST00000571806 STRNO43815 780 aa18.8■□□□□ 0.6
TSR1-202ENST00000571806 COL6A1P12109 1028 aa18.8■□□□□ 0.6
TSR1-202ENST00000571806 COG2Q14746 738 aa18.8■□□□□ 0.6
TSR1-202ENST00000571806 CCL14Q16627 93 aa18.8■□□□□ 0.6
TSR1-202ENST00000571806 ACER1Q8TDN7 264 aa18.8■□□□□ 0.6
TSR1-202ENST00000571806 RPAP3Q9H6T3 665 aaPredicted RBP18.8■□□□□ 0.6
TSR1-202ENST00000571806 GOLIM4O00461 696 aa18.79■□□□□ 0.6
TSR1-202ENST00000571806 CCND3P30281 292 aaPredicted RBP18.79■□□□□ 0.6
TSR1-202ENST00000571806 ATP2B2Q01814 1243 aa18.79■□□□□ 0.6
TSR1-202ENST00000571806 GRB14Q14449 540 aa18.79■□□□□ 0.6
TSR1-202ENST00000571806 WDR78Q5VTH9 848 aa18.79■□□□□ 0.6
TSR1-202ENST00000571806 TMEM179Q6ZVK1 233 aa18.79■□□□□ 0.6
TSR1-202ENST00000571806 MB21D1Q8N884 522 aa18.79■□□□□ 0.6
TSR1-202ENST00000571806 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.79■□□□□ 0.6
TSR1-202ENST00000571806 DCP1AQ9NPI6 582 aaPredicted RBP18.79■□□□□ 0.6
TSR1-202ENST00000571806 ATP8A2Q9NTI2 1148 aa18.79■□□□□ 0.6
TSR1-202ENST00000571806 NAV1Q8NEY1 1877 aa18.79■□□□□ 0.6
TSR1-202ENST00000571806 PFASO15067 1338 aa18.78■□□□□ 0.6
TSR1-202ENST00000571806 TCRBV5S4A2TA0A5A2 114 aa18.78■□□□□ 0.6
TSR1-202ENST00000571806 SPDYE16A6NNV3 312 aaPredicted RBP18.78■□□□□ 0.6
TSR1-202ENST00000571806 MPHOSPH10O00566 681 aaKnown RBP18.78■□□□□ 0.6
TSR1-202ENST00000571806 GUCY1A2P33402 732 aa18.78■□□□□ 0.6
TSR1-202ENST00000571806 SEPT2Q15019 361 aa18.78■□□□□ 0.6
TSR1-202ENST00000571806 AMOTL1Q8IY63 956 aa18.78■□□□□ 0.6
TSR1-202ENST00000571806 LPAR1Q92633 364 aa18.78■□□□□ 0.6
TSR1-202ENST00000571806 DNAJC2Q99543 621 aaKnown RBP18.78■□□□□ 0.6
TSR1-202ENST00000571806 SH2D4AQ9H788 454 aa18.78■□□□□ 0.6
TSR1-202ENST00000571806 ZBTB40Q9NUA8 1239 aa18.78■□□□□ 0.6
TSR1-202ENST00000571806 BTBD7Q9P203 1132 aa18.78■□□□□ 0.6
TSR1-202ENST00000571806 ZMYND8Q9ULU4 1186 aaPredicted RBP18.78■□□□□ 0.6
TSR1-202ENST00000571806 DIEXFQ68CQ4 756 aaKnown RBP18.77■□□□□ 0.6
TSR1-202ENST00000571806 SHCBP1Q8NEM2 672 aa18.77■□□□□ 0.6
TSR1-202ENST00000571806 DDRGK1Q96HY6 314 aa18.77■□□□□ 0.6
TSR1-202ENST00000571806 PAG1Q9NWQ8 432 aa18.77■□□□□ 0.6
TSR1-202ENST00000571806 SLC5A4Q9NY91 659 aa18.77■□□□□ 0.6
TSR1-202ENST00000571806 ATP5JP18859 108 aa18.76■□□□□ 0.59
TSR1-202ENST00000571806 LRIT3Q3SXY7 679 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms