RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 MORF4L1Q9UBU8 362 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 SWAP70Q9UH65 585 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 MGAMO43451 1857 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 BAZ2AQ9UIF9 1905 aaKnown RBP6.5□□□□□ -1.37
CHD3-212ENST00000570758 MPHOSPH10O00566 681 aaKnown RBP6.5□□□□□ -1.37
CHD3-212ENST00000570758 TNPO2O14787 897 aaKnown RBP6.5□□□□□ -1.37
CHD3-212ENST00000570758 ERC2O15083 957 aa6.5□□□□□ -1.37
CHD3-212ENST00000570758 GPAA1O43292 621 aa6.5□□□□□ -1.37
CHD3-212ENST00000570758 ZFYP08048 801 aaPredicted RBP6.5□□□□□ -1.37
CHD3-212ENST00000570758 MX1P20591 662 aa6.5□□□□□ -1.37
CHD3-212ENST00000570758 GRK4P32298 578 aa6.5□□□□□ -1.37
CHD3-212ENST00000570758 CDK8P49336 464 aa6.5□□□□□ -1.37
CHD3-212ENST00000570758 FLT3LGP49771 235 aa6.5□□□□□ -1.37
CHD3-212ENST00000570758 FAM110CQ1W6H9 321 aa6.5□□□□□ -1.37
CHD3-212ENST00000570758 Q3C1V9 767 aa6.5□□□□□ -1.37
CHD3-212ENST00000570758 KIAA1755Q5JYT7 1200 aa6.5□□□□□ -1.37
CHD3-212ENST00000570758 C16orf86Q6ZW13 317 aa6.5□□□□□ -1.37
CHD3-212ENST00000570758 NBPF11Q86T75 865 aa6.5□□□□□ -1.37
CHD3-212ENST00000570758 STK11IPQ8N1F8 1099 aa6.5□□□□□ -1.37
CHD3-212ENST00000570758 GCC1Q96CN9 775 aa6.5□□□□□ -1.37
CHD3-212ENST00000570758 SEC62Q99442 399 aaKnown RBP6.5□□□□□ -1.37
CHD3-212ENST00000570758 FEZ1Q99689 392 aa6.5□□□□□ -1.37
CHD3-212ENST00000570758 LNPKQ9C0E8 428 aa6.5□□□□□ -1.37
CHD3-212ENST00000570758 RBPJLQ9UBG7 517 aa6.5□□□□□ -1.37
CHD3-212ENST00000570758 STAP2Q9UGK3 403 aa6.5□□□□□ -1.37
CHD3-212ENST00000570758 SUPT16HQ9Y5B9 1047 aaKnown RBP6.5□□□□□ -1.37
CHD3-212ENST00000570758 MINDY4BA8MYZ0 360 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 USP17L15C9J2P7 530 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 USP17L13C9JLJ4 530 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 USP17L11C9JVI0 530 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 USP17L18D6R9N7 530 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 USP17L22D6RA61 530 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 USP17L17D6RBQ6 530 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 USP17L19D6RCP7 530 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 USP17L20D6RJB6 530 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 ADCY3O60266 1144 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 CNMDO75829 334 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 CCL5P13501 91 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 ELNP15502 786 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 VCAM1P19320 739 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 USP14P54578 494 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 PDE1AP54750 535 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 ERVK-9P63128 1117 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 ERVK-24P63145 666 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 USP17L24Q0WX57 530 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 IRF5Q13568 498 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 SBK1Q52WX2 424 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 ZMYM1Q5SVZ6 1142 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 GIMAP6Q6P9H5 292 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 CATSPERGQ6ZRH7 1159 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 CCDC129Q6ZRS4 1044 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 TMEM179Q6ZVK1 233 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 SMC5Q8IY18 1101 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 GPRC5AQ8NFJ5 357 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 COA7Q96BR5 231 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 SHISA4Q96DD7 197 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 DDRGK1Q96HY6 314 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 PAGR1Q9BTK6 254 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 FSD1Q9BTV5 496 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.49□□□□□ -1.37
CHD3-212ENST00000570758 TMEM106CQ9BVX2 250 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 RPAP3Q9H6T3 665 aaPredicted RBP6.49□□□□□ -1.37
CHD3-212ENST00000570758 ARPP21Q9UBL0 812 aaPredicted RBP6.49□□□□□ -1.37
CHD3-212ENST00000570758 GJD2Q9UKL4 321 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 TAOK2Q9UL54 1235 aa6.49□□□□□ -1.37
CHD3-212ENST00000570758 RBBP6Q7Z6E9 1792 aaKnown RBP6.49□□□□□ -1.37
CHD3-212ENST00000570758 ROBO3Q96MS0 1386 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 SPDYE16A6NNV3 312 aaPredicted RBP6.48□□□□□ -1.37
CHD3-212ENST00000570758 PATL2C9JE40 543 aaKnown RBP6.48□□□□□ -1.37
CHD3-212ENST00000570758 FOXP2O15409 715 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 INHAP05111 366 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 GNAT2P19087 354 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 RASA1P20936 1047 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 ICA1Q05084 483 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 TRIM32Q13049 653 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 AAMPQ13685 434 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 B4GALNT3Q6L9W6 998 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 AMOTL1Q8IY63 956 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 IFNL3Q8IZI9 196 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 SLAIN1Q8ND83 568 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 GTF3C2Q8WUA4 911 aaPredicted RBP6.48□□□□□ -1.37
CHD3-212ENST00000570758 CCDC17Q96LX7 622 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 UNC93B1Q9H1C4 597 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 PORCNQ9H237 461 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 RWDD1Q9H446 243 aaPredicted RBP6.48□□□□□ -1.37
CHD3-212ENST00000570758 BTBD7Q9P203 1132 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 BIN2Q9UBW5 565 aaPredicted RBP6.48□□□□□ -1.37
CHD3-212ENST00000570758 ZBTB47Q9UFB7 747 aaPredicted RBP6.48□□□□□ -1.37
CHD3-212ENST00000570758 TMX2Q9Y320 296 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 DOCK3Q8IZD9 2030 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 PLXNB2O15031 1838 aa6.48□□□□□ -1.37
CHD3-212ENST00000570758 HTTP42858 3142 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 PRDM1O75626 825 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 APPP05067 770 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 GJB1P08034 283 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 EEF2P13639 858 aaKnown RBP6.47□□□□□ -1.37
CHD3-212ENST00000570758 MAPK4P31152 587 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 TDO2P48775 406 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 UBXN2AP68543 259 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 IRX6P78412 446 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms