RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 HMG20BQ9P0W2 317 aa9□□□□□ -0.97
SMG6-205ENST00000570659 ZBTB21Q9ULJ3 1066 aa9□□□□□ -0.97
SMG6-205ENST00000570659 YBX2Q9Y2T7 364 aaKnown RBP9□□□□□ -0.97
SMG6-205ENST00000570659 HOXC6P09630 235 aa8.99□□□□□ -0.97
SMG6-205ENST00000570659 KRT40Q6A162 431 aa8.99□□□□□ -0.97
SMG6-205ENST00000570659 MAPKAPK5Q8IW41 473 aa8.99□□□□□ -0.97
SMG6-205ENST00000570659 TIFAQ96CG3 184 aa8.99□□□□□ -0.97
SMG6-205ENST00000570659 VWCEQ96DN2 955 aa8.99□□□□□ -0.97
SMG6-205ENST00000570659 CHMP4AQ9BY43 222 aa8.99□□□□□ -0.97
SMG6-205ENST00000570659 CD320Q9NPF0 282 aa8.99□□□□□ -0.97
SMG6-205ENST00000570659 CXXC1Q9P0U4 656 aaPredicted RBP8.99□□□□□ -0.97
SMG6-205ENST00000570659 SAP30BPQ9UHR5 308 aaKnown RBP8.99□□□□□ -0.97
SMG6-205ENST00000570659 DENND2AQ9ULE3 1009 aa8.99□□□□□ -0.97
SMG6-205ENST00000570659 PALD1Q9ULE6 856 aa8.99□□□□□ -0.97
SMG6-205ENST00000570659 SYNGAP1Q96PV0 1343 aa8.99□□□□□ -0.97
SMG6-205ENST00000570659 MUC6Q6W4X9 2439 aa8.99□□□□□ -0.97
SMG6-205ENST00000570659 PARP14Q460N5 1801 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 MYADML2A6NDP7 307 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 SLC15A5A6NIM6 579 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 SPDYE16A6NNV3 312 aaPredicted RBP8.98□□□□□ -0.97
SMG6-205ENST00000570659 RFXAPO00287 272 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 KIAA0355O15063 1070 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 NPM3O75607 178 aaKnown RBP8.98□□□□□ -0.97
SMG6-205ENST00000570659 ARHGEF15O94989 841 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 PGK1P00558 417 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 ACRP10323 421 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 MYOGP15173 224 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 PTGS1P23219 599 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 GUCY1A2P33402 732 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 FAAP100Q0VG06 881 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 NCBP3Q53F19 620 aaKnown RBP8.98□□□□□ -0.97
SMG6-205ENST00000570659 RASIP1Q5U651 963 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 WDR78Q5VTH9 848 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 MFSD14CQ5VZR4 134 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 SPRED2Q7Z698 418 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 METTL16Q86W50 562 aaKnown RBP8.98□□□□□ -0.97
SMG6-205ENST00000570659 ANKS1AQ92625 1134 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 THEGQ9P2T0 379 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 TRANK1O15050 2925 aa8.98□□□□□ -0.97
SMG6-205ENST00000570659 ZNFX1Q9P2E3 1918 aaKnown RBP8.97□□□□□ -0.97
SMG6-205ENST00000570659 LRRC37A2A6NM11 1700 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 COL11A1P12107 1806 aaPredicted RBP8.97□□□□□ -0.97
SMG6-205ENST00000570659 EPOPA6NHQ4 379 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 USP17L10C9JJH3 530 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 SMIM22K7EJ46 135 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 ADCY6O43306 1168 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 PQBP1O60828 265 aaKnown RBP8.97□□□□□ -0.97
SMG6-205ENST00000570659 GH2P01242 217 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 CLTBP09497 229 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 VCAM1P19320 739 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 ADORA2AP29274 412 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 MCAMP43121 646 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 DYNLL1P63167 89 aaKnown RBP8.97□□□□□ -0.97
SMG6-205ENST00000570659 ATP2B2Q01814 1243 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 TFCP2Q12800 502 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 PABPC4Q13310 644 aaKnown RBP eCLIP8.97□□□□□ -0.97
SMG6-205ENST00000570659 TMEM240Q5SV17 173 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 CATSPERGQ6ZRH7 1159 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 CLEC10AQ8IUN9 316 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 TEX11Q8IYF3 940 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 TRMT44Q8IYL2 757 aaKnown RBP8.97□□□□□ -0.97
SMG6-205ENST00000570659 ATXN2LQ8WWM7 1075 aaKnown RBP8.97□□□□□ -0.97
SMG6-205ENST00000570659 XAGE2Q96GT9 111 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 MOV10L1Q9BXT6 1211 aaKnown RBP8.97□□□□□ -0.97
SMG6-205ENST00000570659 TMOD4Q9NZQ9 345 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 PRKAG2Q9UGJ0 569 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 PHF24Q9UPV7 400 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 FLT1P17948 1338 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 UMODL1Q5DID0 1318 aa8.97□□□□□ -0.97
SMG6-205ENST00000570659 PRRC2BQ5JSZ5 2229 aaKnown RBP8.97□□□□□ -0.97
SMG6-205ENST00000570659 PIEZO1Q92508 2521 aa8.96□□□□□ -0.97
SMG6-205ENST00000570659 A0A1B0GUL7 405 aa8.96□□□□□ -0.98
SMG6-205ENST00000570659 A0A1W2PQ45 241 aaPredicted RBP8.96□□□□□ -0.98
SMG6-205ENST00000570659 A0A1W2PQY0 241 aa8.96□□□□□ -0.98
SMG6-205ENST00000570659 A0A1W2PRG0 241 aa8.96□□□□□ -0.98
SMG6-205ENST00000570659 SEMA3EO15041 775 aa8.96□□□□□ -0.98
SMG6-205ENST00000570659 CIAO1O76071 339 aa8.96□□□□□ -0.98
SMG6-205ENST00000570659 ALYREFQ86V81 257 aaKnown RBP8.96□□□□□ -0.98
SMG6-205ENST00000570659 TGFBRAP1Q8WUH2 860 aa8.96□□□□□ -0.98
SMG6-205ENST00000570659 SSH1Q8WYL5 1049 aa8.96□□□□□ -0.98
SMG6-205ENST00000570659 CDCA7LQ96GN5 454 aa8.96□□□□□ -0.98
SMG6-205ENST00000570659 C12orf42Q96LP6 360 aa8.96□□□□□ -0.98
SMG6-205ENST00000570659 NKX2-4Q9H2Z4 354 aa8.96□□□□□ -0.98
SMG6-205ENST00000570659 SNRKQ9NRH2 765 aa8.96□□□□□ -0.98
SMG6-205ENST00000570659 AATFQ9NY61 560 aaKnown RBP eCLIP8.96□□□□□ -0.98
SMG6-205ENST00000570659 CEP126Q9P2H0 1117 aa8.96□□□□□ -0.98
SMG6-205ENST00000570659 TBX21Q9UL17 535 aa8.96□□□□□ -0.98
SMG6-205ENST00000570659 RABGAP1Q9Y3P9 1069 aa8.96□□□□□ -0.98
SMG6-205ENST00000570659 MYH1P12882 1939 aa8.95□□□□□ -0.98
SMG6-205ENST00000570659 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.95□□□□□ -0.98
SMG6-205ENST00000570659 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.95□□□□□ -0.98
SMG6-205ENST00000570659 ZBTB22O15209 634 aa8.95□□□□□ -0.98
SMG6-205ENST00000570659 SEPT4O43236 478 aa8.95□□□□□ -0.98
SMG6-205ENST00000570659 CSF2RAP15509 400 aa8.95□□□□□ -0.98
SMG6-205ENST00000570659 RABGGTBP53611 331 aa8.95□□□□□ -0.98
SMG6-205ENST00000570659 MRPS5P82675 430 aaKnown RBP8.95□□□□□ -0.98
SMG6-205ENST00000570659 FPGSQ05932 587 aa8.95□□□□□ -0.98
SMG6-205ENST00000570659 AKNAD1Q5T1N1 836 aa8.95□□□□□ -0.98
SMG6-205ENST00000570659 C1orf53Q5VUE5 145 aa8.95□□□□□ -0.98
SMG6-205ENST00000570659 ERICH6Q7L0X2 663 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms