RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 TLE2Q04725 743 aa12.93□□□□□ -0.34
CTDNEP1-202ENST00000570380 C1orf53Q5VUE5 145 aa12.93□□□□□ -0.34
CTDNEP1-202ENST00000570380 USP17L2Q6R6M4 530 aa12.93□□□□□ -0.34
CTDNEP1-202ENST00000570380 TBC1D9Q6ZT07 1266 aa12.93□□□□□ -0.34
CTDNEP1-202ENST00000570380 METTL16Q86W50 562 aaKnown RBP12.93□□□□□ -0.34
CTDNEP1-202ENST00000570380 ADAMTS19Q8TE59 1207 aa12.93□□□□□ -0.34
CTDNEP1-202ENST00000570380 SH3RF3Q8TEJ3 882 aaPredicted RBP12.93□□□□□ -0.34
CTDNEP1-202ENST00000570380 PPM1EQ8WY54 764 aa12.93□□□□□ -0.34
CTDNEP1-202ENST00000570380 FERMT2Q96AC1 680 aa12.93□□□□□ -0.34
CTDNEP1-202ENST00000570380 ZBTB21Q9ULJ3 1066 aa12.93□□□□□ -0.34
CTDNEP1-202ENST00000570380 MYH1P12882 1939 aa12.93□□□□□ -0.34
CTDNEP1-202ENST00000570380 GBF1Q92538 1859 aa12.93□□□□□ -0.34
CTDNEP1-202ENST00000570380 REV3LO60673 3130 aa12.93□□□□□ -0.34
CTDNEP1-202ENST00000570380 PTPRCP08575 1304 aa12.92□□□□□ -0.34
CTDNEP1-202ENST00000570380 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.92□□□□□ -0.34
CTDNEP1-202ENST00000570380 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.92□□□□□ -0.34
CTDNEP1-202ENST00000570380 MYCNP04198 464 aaPredicted RBP12.92□□□□□ -0.34
CTDNEP1-202ENST00000570380 GSTO1P78417 241 aa12.92□□□□□ -0.34
CTDNEP1-202ENST00000570380 XAGE2Q96GT9 111 aa12.92□□□□□ -0.34
CTDNEP1-202ENST00000570380 DHX36Q9H2U1 1008 aaKnown RBP12.92□□□□□ -0.34
CTDNEP1-202ENST00000570380 GINM1Q9NU53 330 aa12.92□□□□□ -0.34
CTDNEP1-202ENST00000570380 HMG20BQ9P0W2 317 aa12.92□□□□□ -0.34
CTDNEP1-202ENST00000570380 BTBD7Q9P203 1132 aa12.92□□□□□ -0.34
CTDNEP1-202ENST00000570380 THEGQ9P2T0 379 aa12.92□□□□□ -0.34
CTDNEP1-202ENST00000570380 TACC3Q9Y6A5 838 aa12.92□□□□□ -0.34
CTDNEP1-202ENST00000570380 IVNS1ABPQ9Y6Y0 642 aa12.92□□□□□ -0.34
CTDNEP1-202ENST00000570380 A0A1B0GUL7 405 aa12.91□□□□□ -0.34
CTDNEP1-202ENST00000570380 USP17L15C9J2P7 530 aa12.91□□□□□ -0.34
CTDNEP1-202ENST00000570380 USP17L13C9JLJ4 530 aa12.91□□□□□ -0.34
CTDNEP1-202ENST00000570380 USP17L11C9JVI0 530 aa12.91□□□□□ -0.34
CTDNEP1-202ENST00000570380 USP17L18D6R9N7 530 aa12.91□□□□□ -0.34
CTDNEP1-202ENST00000570380 USP17L22D6RA61 530 aa12.91□□□□□ -0.34
CTDNEP1-202ENST00000570380 USP17L17D6RBQ6 530 aa12.91□□□□□ -0.34
CTDNEP1-202ENST00000570380 USP17L19D6RCP7 530 aa12.91□□□□□ -0.34
CTDNEP1-202ENST00000570380 USP17L20D6RJB6 530 aa12.91□□□□□ -0.34
CTDNEP1-202ENST00000570380 SEPT4O43236 478 aa12.91□□□□□ -0.34
CTDNEP1-202ENST00000570380 USP17L24Q0WX57 530 aa12.91□□□□□ -0.34
CTDNEP1-202ENST00000570380 LRRC41Q15345 812 aa12.91□□□□□ -0.34
CTDNEP1-202ENST00000570380 PI16Q6UXB8 463 aa12.91□□□□□ -0.34
CTDNEP1-202ENST00000570380 CATSPERGQ6ZRH7 1159 aa12.91□□□□□ -0.34
CTDNEP1-202ENST00000570380 FOXP4Q8IVH2 680 aaPredicted RBP12.91□□□□□ -0.34
CTDNEP1-202ENST00000570380 TIFAQ96CG3 184 aa12.91□□□□□ -0.34
CTDNEP1-202ENST00000570380 UHRF1Q96T88 793 aaPredicted RBP12.91□□□□□ -0.34
CTDNEP1-202ENST00000570380 KIAA0355O15063 1070 aa12.9□□□□□ -0.34
CTDNEP1-202ENST00000570380 CLTBP09497 229 aa12.9□□□□□ -0.34
CTDNEP1-202ENST00000570380 MRPS5P82675 430 aaKnown RBP12.9□□□□□ -0.34
CTDNEP1-202ENST00000570380 ZYXQ15942 572 aaKnown RBP12.9□□□□□ -0.34
CTDNEP1-202ENST00000570380 PRAMEF19Q5SWL8 479 aa12.9□□□□□ -0.34
CTDNEP1-202ENST00000570380 AKNAD1Q5T1N1 836 aa12.9□□□□□ -0.34
CTDNEP1-202ENST00000570380 OLFML2BQ68BL8 750 aa12.9□□□□□ -0.34
CTDNEP1-202ENST00000570380 LBX2Q6XYB7 198 aa12.9□□□□□ -0.34
CTDNEP1-202ENST00000570380 CRACR2BQ8N4Y2 399 aaPredicted RBP12.9□□□□□ -0.34
CTDNEP1-202ENST00000570380 C12orf42Q96LP6 360 aa12.9□□□□□ -0.34
CTDNEP1-202ENST00000570380 COPRSQ9NQ92 184 aa12.9□□□□□ -0.34
CTDNEP1-202ENST00000570380 RAI14Q9P0K7 980 aa12.9□□□□□ -0.34
CTDNEP1-202ENST00000570380 XIRP2A4UGR9 3374 aa12.9□□□□□ -0.34
CTDNEP1-202ENST00000570380 CHD9Q3L8U1 2897 aa12.9□□□□□ -0.34
CTDNEP1-202ENST00000570380 RAG1P15918 1043 aa12.89□□□□□ -0.35
CTDNEP1-202ENST00000570380 FPGSQ05932 587 aa12.89□□□□□ -0.35
CTDNEP1-202ENST00000570380 MVPQ14764 893 aaKnown RBP12.89□□□□□ -0.35
CTDNEP1-202ENST00000570380 DPP9Q86TI2 863 aa12.89□□□□□ -0.35
CTDNEP1-202ENST00000570380 MAPKAPK5Q8IW41 473 aa12.89□□□□□ -0.35
CTDNEP1-202ENST00000570380 SPATA5Q8NB90 893 aa12.89□□□□□ -0.35
CTDNEP1-202ENST00000570380 TGFBRAP1Q8WUH2 860 aa12.89□□□□□ -0.35
CTDNEP1-202ENST00000570380 GAS2L1Q99501 681 aaPredicted RBP12.89□□□□□ -0.35
CTDNEP1-202ENST00000570380 PRDM12Q9H4Q4 367 aa12.89□□□□□ -0.35
CTDNEP1-202ENST00000570380 AATFQ9NY61 560 aaKnown RBP eCLIP12.89□□□□□ -0.35
CTDNEP1-202ENST00000570380 PALD1Q9ULE6 856 aa12.89□□□□□ -0.35
CTDNEP1-202ENST00000570380 PHF24Q9UPV7 400 aa12.89□□□□□ -0.35
CTDNEP1-202ENST00000570380 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.89□□□□□ -0.35
CTDNEP1-202ENST00000570380 FLT1P17948 1338 aa12.88□□□□□ -0.35
CTDNEP1-202ENST00000570380 A0A0G2JMZ2 1700 aa12.88□□□□□ -0.35
CTDNEP1-202ENST00000570380 SPDYE16A6NNV3 312 aaPredicted RBP12.88□□□□□ -0.35
CTDNEP1-202ENST00000570380 COBLO75128 1261 aa12.88□□□□□ -0.35
CTDNEP1-202ENST00000570380 GH2P01242 217 aa12.88□□□□□ -0.35
CTDNEP1-202ENST00000570380 ADORA2AP29274 412 aa12.88□□□□□ -0.35
CTDNEP1-202ENST00000570380 PBX2P40425 430 aa12.88□□□□□ -0.35
CTDNEP1-202ENST00000570380 CCDC85BQ15834 202 aaPredicted RBP12.88□□□□□ -0.35
CTDNEP1-202ENST00000570380 FAM47AQ5JRC9 791 aa12.88□□□□□ -0.35
CTDNEP1-202ENST00000570380 NECAB3Q96P71 396 aaPredicted RBP12.88□□□□□ -0.35
CTDNEP1-202ENST00000570380 TRIM34Q9BYJ4 488 aa12.88□□□□□ -0.35
CTDNEP1-202ENST00000570380 GRXCR1A8MXD5 290 aa12.87□□□□□ -0.35
CTDNEP1-202ENST00000570380 UBTFL1P0CB47 393 aaPredicted RBP12.87□□□□□ -0.35
CTDNEP1-202ENST00000570380 VCAM1P19320 739 aa12.87□□□□□ -0.35
CTDNEP1-202ENST00000570380 TFCP2Q12800 502 aa12.87□□□□□ -0.35
CTDNEP1-202ENST00000570380 ADGRE1Q14246 886 aa12.87□□□□□ -0.35
CTDNEP1-202ENST00000570380 NEUROD6Q96NK8 337 aa12.87□□□□□ -0.35
CTDNEP1-202ENST00000570380 FEZ1Q99689 392 aa12.87□□□□□ -0.35
CTDNEP1-202ENST00000570380 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.87□□□□□ -0.35
CTDNEP1-202ENST00000570380 NOL10Q9BSC4 688 aaKnown RBP12.87□□□□□ -0.35
CTDNEP1-202ENST00000570380 PBX4Q9BYU1 374 aa12.87□□□□□ -0.35
CTDNEP1-202ENST00000570380 AKAP2Q9Y2D5 859 aa12.87□□□□□ -0.35
CTDNEP1-202ENST00000570380 CHD7Q9P2D1 2997 aa12.87□□□□□ -0.35
CTDNEP1-202ENST00000570380 SYNGAP1Q96PV0 1343 aa12.87□□□□□ -0.35
CTDNEP1-202ENST00000570380 COL11A1P12107 1806 aaPredicted RBP12.86□□□□□ -0.35
CTDNEP1-202ENST00000570380 PARP14Q460N5 1801 aa12.86□□□□□ -0.35
CTDNEP1-202ENST00000570380 STRNO43815 780 aa12.86□□□□□ -0.35
CTDNEP1-202ENST00000570380 PQBP1O60828 265 aaKnown RBP12.86□□□□□ -0.35
CTDNEP1-202ENST00000570380 BAG3O95817 575 aa12.86□□□□□ -0.35
CTDNEP1-202ENST00000570380 USP14P54578 494 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms