RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 SLURP2P0DP57 97 aa27.6■■■□□ 2.01
RAB40C-212ENST00000569575 PTPRAP18433 802 aa27.6■■■□□ 2.01
RAB40C-212ENST00000569575 HUNKP57058 714 aa27.6■■■□□ 2.01
RAB40C-212ENST00000569575 EXOSC10Q01780 885 aaKnown RBP27.6■■■□□ 2.01
RAB40C-212ENST00000569575 FAM47AQ5JRC9 791 aa27.6■■■□□ 2.01
RAB40C-212ENST00000569575 MKL1Q969V6 931 aa27.6■■■□□ 2.01
RAB40C-212ENST00000569575 ALDH8A1Q9H2A2 487 aaPredicted RBP27.6■■■□□ 2.01
RAB40C-212ENST00000569575 ARHGEF10LQ9HCE6 1279 aa27.6■■■□□ 2.01
RAB40C-212ENST00000569575 SNCAIPQ9Y6H5 919 aa27.6■■■□□ 2.01
RAB40C-212ENST00000569575 CASTP20810 708 aaKnown RBP27.59■■■□□ 2.01
RAB40C-212ENST00000569575 RPS6KB1P23443 525 aa27.59■■■□□ 2.01
RAB40C-212ENST00000569575 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.59■■■□□ 2.01
RAB40C-212ENST00000569575 PRC1O43663 620 aa27.58■■■□□ 2.01
RAB40C-212ENST00000569575 LIFRP42702 1097 aa27.58■■■□□ 2.01
RAB40C-212ENST00000569575 ICA1Q05084 483 aa27.58■■■□□ 2.01
RAB40C-212ENST00000569575 RAB3GAP1Q15042 981 aa27.58■■■□□ 2.01
RAB40C-212ENST00000569575 RABEP1Q15276 862 aa27.58■■■□□ 2.01
RAB40C-212ENST00000569575 OTOFQ9HC10 1997 aa27.58■■■□□ 2.01
RAB40C-212ENST00000569575 C19orf81C9J6K1 198 aa27.57■■■□□ 2
RAB40C-212ENST00000569575 ZBTB48P10074 688 aaPredicted RBP27.57■■■□□ 2
RAB40C-212ENST00000569575 GUCY1A2P33402 732 aa27.57■■■□□ 2
RAB40C-212ENST00000569575 SEPT2Q15019 361 aa27.57■■■□□ 2
RAB40C-212ENST00000569575 ZNF280CQ8ND82 737 aa27.57■■■□□ 2
RAB40C-212ENST00000569575 CCDC102AQ96A19 550 aa27.57■■■□□ 2
RAB40C-212ENST00000569575 CEP95Q96GE4 821 aa27.57■■■□□ 2
RAB40C-212ENST00000569575 IL17RBQ9NRM6 502 aa27.57■■■□□ 2
RAB40C-212ENST00000569575 FZD1Q9UP38 647 aa27.57■■■□□ 2
RAB40C-212ENST00000569575 CXCL11O14625 94 aa27.56■■■□□ 2
RAB40C-212ENST00000569575 IFIT3O14879 490 aaKnown RBP27.56■■■□□ 2
RAB40C-212ENST00000569575 PPIL2Q13356 520 aa27.56■■■□□ 2
RAB40C-212ENST00000569575 ANKRD1Q15327 319 aa27.56■■■□□ 2
RAB40C-212ENST00000569575 RGMBQ6NW40 437 aa27.56■■■□□ 2
RAB40C-212ENST00000569575 MOB2Q70IA6 237 aa27.56■■■□□ 2
RAB40C-212ENST00000569575 CYB5R4Q7L1T6 521 aa27.56■■■□□ 2
RAB40C-212ENST00000569575 IGDCC4Q8TDY8 1250 aa27.56■■■□□ 2
RAB40C-212ENST00000569575 TOP1P11387 765 aaKnown RBP27.55■■■□□ 2
RAB40C-212ENST00000569575 USP14P54578 494 aa27.55■■■□□ 2
RAB40C-212ENST00000569575 AGXT2Q9BYV1 514 aa27.55■■■□□ 2
RAB40C-212ENST00000569575 ABT1Q9ULW3 272 aaKnown RBP27.55■■■□□ 2
RAB40C-212ENST00000569575 TMX2Q9Y320 296 aa27.55■■■□□ 2
RAB40C-212ENST00000569575 ZHX2Q9Y6X8 837 aa27.55■■■□□ 2
RAB40C-212ENST00000569575 TNKSO95271 1327 aa27.55■■■□□ 2
RAB40C-212ENST00000569575 ANTXR2P58335 489 aa27.54■■■□□ 2
RAB40C-212ENST00000569575 JAG1P78504 1218 aa27.54■■■□□ 2
RAB40C-212ENST00000569575 WTAPQ15007 396 aa27.54■■■□□ 2
RAB40C-212ENST00000569575 SEC23AQ15436 765 aa27.54■■■□□ 2
RAB40C-212ENST00000569575 TMEM67Q5HYA8 995 aa27.54■■■□□ 2
RAB40C-212ENST00000569575 KIF2CQ99661 725 aa27.54■■■□□ 2
RAB40C-212ENST00000569575 KIAA1683Q9H0B3 1180 aa27.54■■■□□ 2
RAB40C-212ENST00000569575 ELP3Q9H9T3 547 aa27.54■■■□□ 2
RAB40C-212ENST00000569575 STX8Q9UNK0 236 aa27.54■■■□□ 2
RAB40C-212ENST00000569575 AFG3L2Q9Y4W6 797 aa27.54■■■□□ 2
RAB40C-212ENST00000569575 USP17L10C9JJH3 530 aa27.53■■■□□ 2
RAB40C-212ENST00000569575 EEF2P13639 858 aaKnown RBP27.53■■■□□ 2
RAB40C-212ENST00000569575 FGD1P98174 961 aa27.53■■■□□ 2
RAB40C-212ENST00000569575 IFIT1BQ5T764 474 aaKnown RBP27.53■■■□□ 2
RAB40C-212ENST00000569575 SGMS1Q86VZ5 419 aa27.53■■■□□ 2
RAB40C-212ENST00000569575 ENAHQ8N8S7 591 aaPredicted RBP27.53■■■□□ 2
RAB40C-212ENST00000569575 CLMNQ96JQ2 1002 aa27.53■■■□□ 2
RAB40C-212ENST00000569575 KCNH4Q9UQ05 1017 aa27.53■■■□□ 2
RAB40C-212ENST00000569575 RCAN1P53805 252 aa27.52■■■□□ 2
RAB40C-212ENST00000569575 BACE1P56817 501 aa27.52■■■□□ 2
RAB40C-212ENST00000569575 RCSD1Q6JBY9 416 aa27.52■■■□□ 2
RAB40C-212ENST00000569575 LPAR1Q92633 364 aa27.52■■■□□ 2
RAB40C-212ENST00000569575 OPTNQ96CV9 577 aa27.52■■■□□ 2
RAB40C-212ENST00000569575 GOPCQ9HD26 462 aa27.52■■■□□ 2
RAB40C-212ENST00000569575 PDRG1Q9NUG6 133 aa27.52■■■□□ 2
RAB40C-212ENST00000569575 CLIP2Q9UDT6 1046 aa27.52■■■□□ 2
RAB40C-212ENST00000569575 RASSF10A6NK89 507 aa27.51■■□□□ 1.99
RAB40C-212ENST00000569575 SH2B2O14492 632 aaPredicted RBP27.51■■□□□ 1.99
RAB40C-212ENST00000569575 ZNF157P51786 506 aaPredicted RBP27.51■■□□□ 1.99
RAB40C-212ENST00000569575 NEK4P51957 841 aa27.51■■□□□ 1.99
RAB40C-212ENST00000569575 SH3D19Q5HYK7 790 aa27.51■■□□□ 1.99
RAB40C-212ENST00000569575 SIAH1Q8IUQ4 282 aa27.51■■□□□ 1.99
RAB40C-212ENST00000569575 GMCL1P1Q8NEA9 526 aa27.51■■□□□ 1.99
RAB40C-212ENST00000569575 KAT14Q9H8E8 782 aa27.51■■□□□ 1.99
RAB40C-212ENST00000569575 ST18O60284 1047 aa27.5■■□□□ 1.99
RAB40C-212ENST00000569575 EVCP57679 992 aa27.5■■□□□ 1.99
RAB40C-212ENST00000569575 SPP2Q13103 211 aa27.5■■□□□ 1.99
RAB40C-212ENST00000569575 REM2Q8IYK8 340 aaPredicted RBP27.5■■□□□ 1.99
RAB40C-212ENST00000569575 WNK4Q96J92 1243 aa27.5■■□□□ 1.99
RAB40C-212ENST00000569575 MAP3K14Q99558 947 aa27.5■■□□□ 1.99
RAB40C-212ENST00000569575 PHIPQ8WWQ0 1821 aa27.5■■□□□ 1.99
RAB40C-212ENST00000569575 NMT2O60551 498 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 CALM1P0DP23 149 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 CALM2P0DP24 149 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 CALM3P0DP25 149 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 ECE1P42892 770 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 MCM2P49736 904 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 GTF2A2P52657 109 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 INHBEP58166 350 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 SNAPC2Q13487 334 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 PPP2R5BQ15173 497 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 SPRYD7Q5W111 196 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 USP17L2Q6R6M4 530 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 OTUD5Q96G74 571 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 C12orf42Q96LP6 360 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 TMEM47Q9BQJ4 181 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 ZKSCAN3Q9BRR0 538 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 UPF3BQ9BZI7 483 aaKnown RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms