RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 GLRX3O76003 335 aaKnown RBP11.31□□□□□ -0.6
TCF4-243ENST00000569357 RAG1P15918 1043 aa11.31□□□□□ -0.6
TCF4-243ENST00000569357 HOXA7P31268 230 aaPredicted RBP11.31□□□□□ -0.6
TCF4-243ENST00000569357 ADCYAP1R1P41586 468 aa11.31□□□□□ -0.6
TCF4-243ENST00000569357 RRP1BQ14684 758 aaKnown RBP11.31□□□□□ -0.6
TCF4-243ENST00000569357 SLF2Q8IX21 1173 aa11.31□□□□□ -0.6
TCF4-243ENST00000569357 DENND2AQ9ULE3 1009 aa11.31□□□□□ -0.6
TCF4-243ENST00000569357 IVNS1ABPQ9Y6Y0 642 aa11.31□□□□□ -0.6
TCF4-243ENST00000569357 LTBP2Q14767 1821 aa11.3□□□□□ -0.6
TCF4-243ENST00000569357 PHIPQ8WWQ0 1821 aa11.3□□□□□ -0.6
TCF4-243ENST00000569357 ITGB8P26012 769 aa11.3□□□□□ -0.6
TCF4-243ENST00000569357 BACE1P56817 501 aa11.3□□□□□ -0.6
TCF4-243ENST00000569357 TLE2Q04725 743 aa11.3□□□□□ -0.6
TCF4-243ENST00000569357 ZGPATQ8N5A5 531 aaKnown RBP11.3□□□□□ -0.6
TCF4-243ENST00000569357 ANKRD44Q8N8A2 993 aa11.3□□□□□ -0.6
TCF4-243ENST00000569357 LRFN3Q9BTN0 628 aa11.3□□□□□ -0.6
TCF4-243ENST00000569357 TACC3Q9Y6A5 838 aa11.3□□□□□ -0.6
TCF4-243ENST00000569357 UTYO14607 1347 aa11.3□□□□□ -0.6
TCF4-243ENST00000569357 GAKO14976 1311 aa11.3□□□□□ -0.6
TCF4-243ENST00000569357 EYA2O00167 538 aa11.29□□□□□ -0.6
TCF4-243ENST00000569357 PHKA1P46020 1223 aa11.29□□□□□ -0.6
TCF4-243ENST00000569357 CCNA1P78396 465 aa11.29□□□□□ -0.6
TCF4-243ENST00000569357 FPGSQ05932 587 aa11.29□□□□□ -0.6
TCF4-243ENST00000569357 EXOSC9Q06265 439 aaKnown RBP11.29□□□□□ -0.6
TCF4-243ENST00000569357 RABL6Q3YEC7 729 aaPredicted RBP11.29□□□□□ -0.6
TCF4-243ENST00000569357 AKNAD1Q5T1N1 836 aa11.29□□□□□ -0.6
TCF4-243ENST00000569357 ALYREFQ86V81 257 aaKnown RBP11.29□□□□□ -0.6
TCF4-243ENST00000569357 WWC1Q8IX03 1113 aa11.29□□□□□ -0.6
TCF4-243ENST00000569357 TRPV1Q8NER1 839 aa11.29□□□□□ -0.6
TCF4-243ENST00000569357 SYNGAP1Q96PV0 1343 aa11.29□□□□□ -0.6
TCF4-243ENST00000569357 SALL1Q9NSC2 1324 aa11.29□□□□□ -0.6
TCF4-243ENST00000569357 RFX7Q2KHR2 1363 aa11.28□□□□□ -0.6
TCF4-243ENST00000569357 SLC15A5A6NIM6 579 aa11.28□□□□□ -0.6
TCF4-243ENST00000569357 C19orf81C9J6K1 198 aa11.28□□□□□ -0.6
TCF4-243ENST00000569357 USP17L10C9JJH3 530 aa11.28□□□□□ -0.6
TCF4-243ENST00000569357 CLTBP09497 229 aa11.28□□□□□ -0.6
TCF4-243ENST00000569357 PTPREP23469 700 aa11.28□□□□□ -0.6
TCF4-243ENST00000569357 PBX2P40425 430 aa11.28□□□□□ -0.6
TCF4-243ENST00000569357 DDX10Q13206 875 aaKnown RBP11.28□□□□□ -0.6
TCF4-243ENST00000569357 ATP2B3Q16720 1220 aa11.28□□□□□ -0.6
TCF4-243ENST00000569357 MICALL1Q8N3F8 863 aa11.28□□□□□ -0.6
TCF4-243ENST00000569357 NPLOC4Q8TAT6 608 aa11.28□□□□□ -0.6
TCF4-243ENST00000569357 GTF3C2Q8WUA4 911 aaPredicted RBP11.28□□□□□ -0.6
TCF4-243ENST00000569357 WDR18Q9BV38 432 aa11.28□□□□□ -0.6
TCF4-243ENST00000569357 EPHX3Q9H6B9 360 aa11.28□□□□□ -0.6
TCF4-243ENST00000569357 FANCIQ9NVI1 1328 aa11.28□□□□□ -0.6
TCF4-243ENST00000569357 LOC285556D6RIA3 1793 aa11.28□□□□□ -0.6
TCF4-243ENST00000569357 GRXCR1A8MXD5 290 aa11.27□□□□□ -0.61
TCF4-243ENST00000569357 PQBP1O60828 265 aaKnown RBP11.27□□□□□ -0.61
TCF4-243ENST00000569357 ASNSP08243 561 aa11.27□□□□□ -0.61
TCF4-243ENST00000569357 CYBAP13498 195 aa11.27□□□□□ -0.61
TCF4-243ENST00000569357 SNX17Q15036 470 aa11.27□□□□□ -0.61
TCF4-243ENST00000569357 SPTY2D1Q68D10 685 aaPredicted RBP11.27□□□□□ -0.61
TCF4-243ENST00000569357 DPP9Q86TI2 863 aa11.27□□□□□ -0.61
TCF4-243ENST00000569357 TRIM34Q9BYJ4 488 aa11.27□□□□□ -0.61
TCF4-243ENST00000569357 SIL1Q9H173 461 aa11.27□□□□□ -0.61
TCF4-243ENST00000569357 TMEM39AQ9NV64 488 aa11.27□□□□□ -0.61
TCF4-243ENST00000569357 MROH7-TTC4A0A0A0MT08 1334 aa11.27□□□□□ -0.61
TCF4-243ENST00000569357 SEMA3EO15041 775 aa11.26□□□□□ -0.61
TCF4-243ENST00000569357 GDF11O95390 407 aa11.26□□□□□ -0.61
TCF4-243ENST00000569357 RHBDL3P58872 404 aa11.26□□□□□ -0.61
TCF4-243ENST00000569357 TFF2Q03403 129 aa11.26□□□□□ -0.61
TCF4-243ENST00000569357 ADGRE1Q14246 886 aa11.26□□□□□ -0.61
TCF4-243ENST00000569357 SKIV2LQ15477 1246 aaKnown RBP11.26□□□□□ -0.61
TCF4-243ENST00000569357 ZYXQ15942 572 aaKnown RBP11.26□□□□□ -0.61
TCF4-243ENST00000569357 TMEM31Q5JXX7 168 aa11.26□□□□□ -0.61
TCF4-243ENST00000569357 PRAMEF19Q5SWL8 479 aa11.26□□□□□ -0.61
TCF4-243ENST00000569357 ERICH6Q7L0X2 663 aa11.26□□□□□ -0.61
TCF4-243ENST00000569357 CRACR2BQ8N4Y2 399 aaPredicted RBP11.26□□□□□ -0.61
TCF4-243ENST00000569357 PBX4Q9BYU1 374 aa11.26□□□□□ -0.61
TCF4-243ENST00000569357 CEP126Q9P2H0 1117 aa11.26□□□□□ -0.61
TCF4-243ENST00000569357 HERC5Q9UII4 1024 aaKnown RBP11.26□□□□□ -0.61
TCF4-243ENST00000569357 RABGAP1Q9Y3P9 1069 aa11.26□□□□□ -0.61
TCF4-243ENST00000569357 SALL2Q9Y467 1007 aaPredicted RBP11.26□□□□□ -0.61
TCF4-243ENST00000569357 ARIH1Q9Y4X5 557 aaPredicted RBP11.26□□□□□ -0.61
TCF4-243ENST00000569357 LAMA2P24043 3122 aaKnown RBP11.26□□□□□ -0.61
TCF4-243ENST00000569357 GPR75-ASB3A0A0A6YYF3 556 aa11.25□□□□□ -0.61
TCF4-243ENST00000569357 SEPT4O43236 478 aa11.25□□□□□ -0.61
TCF4-243ENST00000569357 CNMDO75829 334 aa11.25□□□□□ -0.61
TCF4-243ENST00000569357 HOXC6P09630 235 aa11.25□□□□□ -0.61
TCF4-243ENST00000569357 ADORA1P30542 326 aa11.25□□□□□ -0.61
TCF4-243ENST00000569357 KCNQ1P51787 676 aa11.25□□□□□ -0.61
TCF4-243ENST00000569357 JAG1P78504 1218 aa11.25□□□□□ -0.61
TCF4-243ENST00000569357 MECOMQ03112 1051 aa11.25□□□□□ -0.61
TCF4-243ENST00000569357 LRRC41Q15345 812 aa11.25□□□□□ -0.61
TCF4-243ENST00000569357 SHROOM1Q2M3G4 852 aaPredicted RBP11.25□□□□□ -0.61
TCF4-243ENST00000569357 FEZ1Q99689 392 aa11.25□□□□□ -0.61
TCF4-243ENST00000569357 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.25□□□□□ -0.61
TCF4-243ENST00000569357 EMILIN3Q9NT22 766 aa11.25□□□□□ -0.61
TCF4-243ENST00000569357 FRMPD3Q5JV73 1810 aa11.25□□□□□ -0.61
TCF4-243ENST00000569357 MYH13Q9UKX3 1938 aa11.25□□□□□ -0.61
TCF4-243ENST00000569357 KIAA0355O15063 1070 aa11.24□□□□□ -0.61
TCF4-243ENST00000569357 BMP1P13497 986 aa11.24□□□□□ -0.61
TCF4-243ENST00000569357 RASGRF1Q13972 1273 aa11.24□□□□□ -0.61
TCF4-243ENST00000569357 GRB14Q14449 540 aa11.24□□□□□ -0.61
TCF4-243ENST00000569357 CCDC27Q2M243 656 aa11.24□□□□□ -0.61
TCF4-243ENST00000569357 AAK1Q2M2I8 961 aa11.24□□□□□ -0.61
TCF4-243ENST00000569357 FAM47AQ5JRC9 791 aa11.24□□□□□ -0.61
TCF4-243ENST00000569357 C1orf53Q5VUE5 145 aa11.24□□□□□ -0.61
TCF4-243ENST00000569357 CCDC102BQ68D86 513 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms