RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 ESYT1Q9BSJ8 1104 aa11.21□□□□□ -0.61
UBR1-210ENST00000569337 HELLSQ9NRZ9 838 aa11.21□□□□□ -0.61
UBR1-210ENST00000569337 DIAPH3Q9NSV4 1193 aa11.21□□□□□ -0.61
UBR1-210ENST00000569337 SWAP70Q9UH65 585 aa11.21□□□□□ -0.61
UBR1-210ENST00000569337 TAOK2Q9UL54 1235 aa11.21□□□□□ -0.61
UBR1-210ENST00000569337 MYH1P12882 1939 aa11.21□□□□□ -0.62
UBR1-210ENST00000569337 GPAA1O43292 621 aa11.2□□□□□ -0.62
UBR1-210ENST00000569337 RGS19P49795 217 aa11.2□□□□□ -0.62
UBR1-210ENST00000569337 PRMT2P55345 433 aa11.2□□□□□ -0.62
UBR1-210ENST00000569337 SOX10P56693 466 aa11.2□□□□□ -0.62
UBR1-210ENST00000569337 IRX3P78415 501 aaPredicted RBP11.2□□□□□ -0.62
UBR1-210ENST00000569337 EVX2Q03828 476 aa11.2□□□□□ -0.62
UBR1-210ENST00000569337 MAPK8IP2Q13387 824 aaPredicted RBP11.2□□□□□ -0.62
UBR1-210ENST00000569337 C12orf60Q5U649 245 aa11.2□□□□□ -0.62
UBR1-210ENST00000569337 VPS53Q5VIR6 699 aa11.2□□□□□ -0.62
UBR1-210ENST00000569337 CTR9Q6PD62 1173 aa11.2□□□□□ -0.62
UBR1-210ENST00000569337 USP17L2Q6R6M4 530 aa11.2□□□□□ -0.62
UBR1-210ENST00000569337 NBPF11Q86T75 865 aa11.2□□□□□ -0.62
UBR1-210ENST00000569337 DYNLL2Q96FJ2 89 aa11.2□□□□□ -0.62
UBR1-210ENST00000569337 TRIM47Q96LD4 638 aa11.2□□□□□ -0.62
UBR1-210ENST00000569337 ASCC2Q9H1I8 757 aaPredicted RBP11.2□□□□□ -0.62
UBR1-210ENST00000569337 PTCH2Q9Y6C5 1203 aa11.2□□□□□ -0.62
UBR1-210ENST00000569337 CYP2D7A0A087X1C5 515 aa11.19□□□□□ -0.62
UBR1-210ENST00000569337 APPP05067 770 aa11.19□□□□□ -0.62
UBR1-210ENST00000569337 GNAT2P19087 354 aa11.19□□□□□ -0.62
UBR1-210ENST00000569337 HOXA7P31268 230 aaPredicted RBP11.19□□□□□ -0.62
UBR1-210ENST00000569337 GCLCP48506 637 aaPredicted RBP11.19□□□□□ -0.62
UBR1-210ENST00000569337 USP14P54578 494 aa11.19□□□□□ -0.62
UBR1-210ENST00000569337 FCGRTP55899 365 aa11.19□□□□□ -0.62
UBR1-210ENST00000569337 MLLT1Q03111 559 aaPredicted RBP11.19□□□□□ -0.62
UBR1-210ENST00000569337 SEPT2Q15019 361 aa11.19□□□□□ -0.62
UBR1-210ENST00000569337 ZYXQ15942 572 aaKnown RBP11.19□□□□□ -0.62
UBR1-210ENST00000569337 SLC9C1Q4G0N8 1177 aa11.19□□□□□ -0.62
UBR1-210ENST00000569337 GIMAP6Q6P9H5 292 aa11.19□□□□□ -0.62
UBR1-210ENST00000569337 ANKRD13CQ8N6S4 541 aa11.19□□□□□ -0.62
UBR1-210ENST00000569337 SLC44A5Q8NCS7 719 aa11.19□□□□□ -0.62
UBR1-210ENST00000569337 CCDC17Q96LX7 622 aa11.19□□□□□ -0.62
UBR1-210ENST00000569337 EMILIN3Q9NT22 766 aa11.19□□□□□ -0.62
UBR1-210ENST00000569337 ARPP21Q9UBL0 812 aaPredicted RBP11.19□□□□□ -0.62
UBR1-210ENST00000569337 SRRDQ9UH36 339 aa11.19□□□□□ -0.62
UBR1-210ENST00000569337 DOCK1Q14185 1865 aa11.19□□□□□ -0.62
UBR1-210ENST00000569337 NAV1Q8NEY1 1877 aa11.19□□□□□ -0.62
UBR1-210ENST00000569337 CCDC171Q6TFL3 1326 aa11.18□□□□□ -0.62
UBR1-210ENST00000569337 GSG1L2A8MUP6 293 aa11.18□□□□□ -0.62
UBR1-210ENST00000569337 CTGFP29279 349 aa11.18□□□□□ -0.62
UBR1-210ENST00000569337 CDK8P49336 464 aa11.18□□□□□ -0.62
UBR1-210ENST00000569337 PTH1RQ03431 593 aa11.18□□□□□ -0.62
UBR1-210ENST00000569337 FAM110CQ1W6H9 321 aa11.18□□□□□ -0.62
UBR1-210ENST00000569337 TMEM179Q6ZVK1 233 aa11.18□□□□□ -0.62
UBR1-210ENST00000569337 C16orf86Q6ZW13 317 aa11.18□□□□□ -0.62
UBR1-210ENST00000569337 RAET1EQ8TD07 263 aa11.18□□□□□ -0.62
UBR1-210ENST00000569337 ACER1Q8TDN7 264 aa11.18□□□□□ -0.62
UBR1-210ENST00000569337 P2RX7Q99572 595 aaKnown RBP11.18□□□□□ -0.62
UBR1-210ENST00000569337 LSG1Q9H089 658 aaKnown RBP11.18□□□□□ -0.62
UBR1-210ENST00000569337 KIAA1683Q9H0B3 1180 aa11.18□□□□□ -0.62
UBR1-210ENST00000569337 DDX60LQ5H9U9 1706 aaKnown RBP11.18□□□□□ -0.62
UBR1-210ENST00000569337 RAD50Q92878 1312 aa11.17□□□□□ -0.62
UBR1-210ENST00000569337 MINDY4BA8MYZ0 360 aa11.17□□□□□ -0.62
UBR1-210ENST00000569337 PATL2C9JE40 543 aaKnown RBP11.17□□□□□ -0.62
UBR1-210ENST00000569337 SMIM22K7EJ46 135 aa11.17□□□□□ -0.62
UBR1-210ENST00000569337 TNPO2O14787 897 aaKnown RBP11.17□□□□□ -0.62
UBR1-210ENST00000569337 GUCY1A2P33402 732 aa11.17□□□□□ -0.62
UBR1-210ENST00000569337 TDO2P48775 406 aa11.17□□□□□ -0.62
UBR1-210ENST00000569337 SBK1Q52WX2 424 aa11.17□□□□□ -0.62
UBR1-210ENST00000569337 RUFY2Q8WXA3 655 aa11.17□□□□□ -0.62
UBR1-210ENST00000569337 ARMC5Q96C12 935 aa11.17□□□□□ -0.62
UBR1-210ENST00000569337 C12orf42Q96LP6 360 aa11.17□□□□□ -0.62
UBR1-210ENST00000569337 NACAP1Q9BZK3 213 aa11.17□□□□□ -0.62
UBR1-210ENST00000569337 EPB41L4AQ9HCS5 686 aaPredicted RBP11.17□□□□□ -0.62
UBR1-210ENST00000569337 SIPA1L1O43166 1804 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 MYPNQ86TC9 1320 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 USP17L15C9J2P7 530 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 USP17L13C9JLJ4 530 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 USP17L11C9JVI0 530 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 USP17L18D6R9N7 530 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 USP17L22D6RA61 530 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 USP17L17D6RBQ6 530 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 USP17L19D6RCP7 530 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 USP17L20D6RJB6 530 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 HSPD1P10809 573 aaKnown RBP11.16□□□□□ -0.62
UBR1-210ENST00000569337 AKR1B1P15121 316 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 HERVK_113P62684 666 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 PRKCZQ05513 592 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 USP17L24Q0WX57 530 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 CASC1Q6TDU7 716 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 IFNL3Q8IZI9 196 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 STK11IPQ8N1F8 1099 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 SH3TC2Q8TF17 1288 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 COA7Q96BR5 231 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 TMEM106CQ9BVX2 250 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 BACH2Q9BYV9 841 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 MKNK2Q9HBH9 465 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 ARHGEF10LQ9HCE6 1279 aa11.16□□□□□ -0.62
UBR1-210ENST00000569337 LAMA4Q16363 1823 aa11.15□□□□□ -0.62
UBR1-210ENST00000569337 VCAM1P19320 739 aa11.15□□□□□ -0.62
UBR1-210ENST00000569337 GRK4P32298 578 aa11.15□□□□□ -0.62
UBR1-210ENST00000569337 ICA1Q05084 483 aa11.15□□□□□ -0.62
UBR1-210ENST00000569337 CATSPERGQ6ZRH7 1159 aa11.15□□□□□ -0.62
UBR1-210ENST00000569337 CCAR1Q8IX12 1150 aaKnown RBP11.15□□□□□ -0.62
UBR1-210ENST00000569337 GPRC5AQ8NFJ5 357 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms