RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 HERVK_113P62684 666 aa13.7□□□□□ -0.22
CHRFAM7A-206ENST00000569278 GSTO1P78417 241 aa13.7□□□□□ -0.22
CHRFAM7A-206ENST00000569278 Q3C1V9 767 aa13.7□□□□□ -0.22
CHRFAM7A-206ENST00000569278 NECAB2Q7Z6G3 386 aa13.7□□□□□ -0.22
CHRFAM7A-206ENST00000569278 RBPJLQ9UBG7 517 aa13.7□□□□□ -0.22
CHRFAM7A-206ENST00000569278 ZBTB21Q9ULJ3 1066 aa13.7□□□□□ -0.22
CHRFAM7A-206ENST00000569278 CUL9Q8IWT3 2517 aa13.7□□□□□ -0.22
CHRFAM7A-206ENST00000569278 RLFQ13129 1914 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 GNAI2P04899 355 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 LDHCP07864 332 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 C7P10643 843 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 SYN1P17600 705 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 CYP2B6P20813 491 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 BMP8BP34820 402 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 PDE3AQ14432 1141 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 CCL14Q16627 93 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 TNNI3KQ59H18 835 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 MORN1Q5T089 497 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 IER5LQ5T953 404 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 TGFBRAP1Q8WUH2 860 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 EMILIN3Q9NT22 766 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 PI4KBQ9UBF8 816 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 PALD1Q9ULE6 856 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 HDAC5Q9UQL6 1122 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 FPGT-TNNI3KV9GXZ4 949 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 NAV1Q8NEY1 1877 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 MUC3AQ02505 3323 aa13.69□□□□□ -0.22
CHRFAM7A-206ENST00000569278 ASNSP08243 561 aa13.68□□□□□ -0.22
CHRFAM7A-206ENST00000569278 CAPN2P17655 700 aa13.68□□□□□ -0.22
CHRFAM7A-206ENST00000569278 MAGEA10P43363 369 aaPredicted RBP13.68□□□□□ -0.22
CHRFAM7A-206ENST00000569278 DYNLL1P63167 89 aaKnown RBP13.68□□□□□ -0.22
CHRFAM7A-206ENST00000569278 LHX8Q68G74 356 aa13.68□□□□□ -0.22
CHRFAM7A-206ENST00000569278 NAA16Q6N069 864 aaPredicted RBP13.68□□□□□ -0.22
CHRFAM7A-206ENST00000569278 ATF7IPQ6VMQ6 1270 aa13.68□□□□□ -0.22
CHRFAM7A-206ENST00000569278 Q7L0L9 218 aa13.68□□□□□ -0.22
CHRFAM7A-206ENST00000569278 TMEM57Q8N5G2 664 aa13.68□□□□□ -0.22
CHRFAM7A-206ENST00000569278 SSH3Q8TE77 659 aa13.68□□□□□ -0.22
CHRFAM7A-206ENST00000569278 CLUAP1Q96AJ1 413 aa13.68□□□□□ -0.22
CHRFAM7A-206ENST00000569278 HMX1Q9NP08 348 aaPredicted RBP13.68□□□□□ -0.22
CHRFAM7A-206ENST00000569278 LRP2BPQ9P2M1 347 aa13.68□□□□□ -0.22
CHRFAM7A-206ENST00000569278 METRNQ9UJH8 293 aa13.68□□□□□ -0.22
CHRFAM7A-206ENST00000569278 DBNLQ9UJU6 430 aaKnown RBP13.68□□□□□ -0.22
CHRFAM7A-206ENST00000569278 ZNF236Q9UL36 1845 aa13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 IGHA2P01877 340 aa13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 UQCRFS1P1P0C7P4 283 aa13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 XRCC5P13010 732 aaKnown RBP13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 CCND3P30281 292 aaPredicted RBP13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 ZAP70P43403 619 aa13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 ERVK-9P63128 1117 aa13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 ERVK-24P63145 666 aa13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 CACNB2Q08289 660 aaPredicted RBP13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 PABPC4Q13310 644 aaKnown RBP eCLIP13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 CCDC136Q96JN2 1154 aa13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 NBPF3Q9H094 633 aa13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 DHX36Q9H2U1 1008 aaKnown RBP13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 C11orf49Q9H6J7 331 aa13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 C1orf115Q9H7X2 142 aa13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 AS3MTQ9HBK9 375 aa13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 GPR108Q9NPR9 543 aa13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 FLRT1Q9NZU1 646 aa13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 SAP30BPQ9UHR5 308 aaKnown RBP13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 NDUFB9Q9Y6M9 179 aa13.67□□□□□ -0.22
CHRFAM7A-206ENST00000569278 IRX3P78415 501 aaPredicted RBP13.66□□□□□ -0.22
CHRFAM7A-206ENST00000569278 LRRC26Q2I0M4 334 aa13.66□□□□□ -0.22
CHRFAM7A-206ENST00000569278 GORABQ5T7V8 394 aa13.66□□□□□ -0.22
CHRFAM7A-206ENST00000569278 GPR142Q7Z601 462 aa13.66□□□□□ -0.22
CHRFAM7A-206ENST00000569278 SOCS4Q8WXH5 440 aa13.66□□□□□ -0.22
CHRFAM7A-206ENST00000569278 ZNF512BQ96KM6 892 aaPredicted RBP13.66□□□□□ -0.22
CHRFAM7A-206ENST00000569278 C12orf42Q96LP6 360 aa13.66□□□□□ -0.22
CHRFAM7A-206ENST00000569278 PARP14Q460N5 1801 aa13.66□□□□□ -0.22
CHRFAM7A-206ENST00000569278 USP17L10C9JJH3 530 aa13.65□□□□□ -0.22
CHRFAM7A-206ENST00000569278 RLBP1P12271 317 aa13.65□□□□□ -0.22
CHRFAM7A-206ENST00000569278 GUCY1A2P33402 732 aa13.65□□□□□ -0.22
CHRFAM7A-206ENST00000569278 G3BP1Q13283 466 aaKnown RBP eCLIP13.65□□□□□ -0.22
CHRFAM7A-206ENST00000569278 LRIT3Q3SXY7 679 aa13.65□□□□□ -0.22
CHRFAM7A-206ENST00000569278 TATDN1Q6P1N9 297 aa13.65□□□□□ -0.22
CHRFAM7A-206ENST00000569278 GPRC5AQ8NFJ5 357 aa13.65□□□□□ -0.22
CHRFAM7A-206ENST00000569278 C19orf81C9J6K1 198 aa13.64□□□□□ -0.23
CHRFAM7A-206ENST00000569278 GH2P01242 217 aa13.64□□□□□ -0.23
CHRFAM7A-206ENST00000569278 ZKSCAN1P17029 563 aaPredicted RBP13.64□□□□□ -0.23
CHRFAM7A-206ENST00000569278 IRX5P78411 483 aaPredicted RBP13.64□□□□□ -0.23
CHRFAM7A-206ENST00000569278 TTC39AQ5SRH9 613 aa13.64□□□□□ -0.23
CHRFAM7A-206ENST00000569278 MIGA1Q8NAN2 632 aa13.64□□□□□ -0.23
CHRFAM7A-206ENST00000569278 ACER1Q8TDN7 264 aa13.64□□□□□ -0.23
CHRFAM7A-206ENST00000569278 EAF2Q96CJ1 260 aaPredicted RBP13.64□□□□□ -0.23
CHRFAM7A-206ENST00000569278 APBA2Q99767 749 aa13.64□□□□□ -0.23
CHRFAM7A-206ENST00000569278 NUDT12Q9BQG2 462 aa13.64□□□□□ -0.23
CHRFAM7A-206ENST00000569278 ANTXR1Q9H6X2 564 aa13.64□□□□□ -0.23
CHRFAM7A-206ENST00000569278 TMOD4Q9NZQ9 345 aa13.64□□□□□ -0.23
CHRFAM7A-206ENST00000569278 NOP58Q9Y2X3 529 aaKnown RBP13.64□□□□□ -0.23
CHRFAM7A-206ENST00000569278 BAG3O95817 575 aa13.63□□□□□ -0.23
CHRFAM7A-206ENST00000569278 PLCG2P16885 1265 aa13.63□□□□□ -0.23
CHRFAM7A-206ENST00000569278 MAPK4P31152 587 aa13.63□□□□□ -0.23
CHRFAM7A-206ENST00000569278 SHMT1P34896 483 aa13.63□□□□□ -0.23
CHRFAM7A-206ENST00000569278 ATP8B2P98198 1209 aa13.63□□□□□ -0.23
CHRFAM7A-206ENST00000569278 GPR153Q6NV75 609 aa13.63□□□□□ -0.23
CHRFAM7A-206ENST00000569278 FOXP4Q8IVH2 680 aaPredicted RBP13.63□□□□□ -0.23
CHRFAM7A-206ENST00000569278 TDHQ8IZJ6 230 aa13.63□□□□□ -0.23
CHRFAM7A-206ENST00000569278 SLC17A8Q8NDX2 589 aa13.63□□□□□ -0.23
CHRFAM7A-206ENST00000569278 TRPV1Q8NER1 839 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms