RNA–Protein interactions for RNA: ENST00000569018.5

KATNB1-209, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-209ENST00000569018 EMILIN3Q9NT22 766 aa22.42■■□□□ 1.18
KATNB1-209ENST00000569018 PTPN22Q9Y2R2 807 aa22.42■■□□□ 1.18
KATNB1-209ENST00000569018 MYH8P13535 1937 aa22.41■■□□□ 1.18
KATNB1-209ENST00000569018 SMIM22K7EJ46 135 aa22.41■■□□□ 1.18
KATNB1-209ENST00000569018 MPHOSPH10O00566 681 aaKnown RBP22.41■■□□□ 1.18
KATNB1-209ENST00000569018 APPP05067 770 aa22.41■■□□□ 1.18
KATNB1-209ENST00000569018 GCLCP48506 637 aaPredicted RBP22.41■■□□□ 1.18
KATNB1-209ENST00000569018 IFNL3Q8IZI9 196 aa22.41■■□□□ 1.18
KATNB1-209ENST00000569018 ASCC2Q9H1I8 757 aaPredicted RBP22.41■■□□□ 1.18
KATNB1-209ENST00000569018 CCDC85CA6NKD9 419 aa22.4■■□□□ 1.18
KATNB1-209ENST00000569018 AKR1B1P15121 316 aa22.4■■□□□ 1.18
KATNB1-209ENST00000569018 PRMT2P55345 433 aa22.4■■□□□ 1.18
KATNB1-209ENST00000569018 ACER1Q8TDN7 264 aa22.4■■□□□ 1.18
KATNB1-209ENST00000569018 MINDY4BA8MYZ0 360 aa22.39■■□□□ 1.17
KATNB1-209ENST00000569018 IRX3P78415 501 aaPredicted RBP22.39■■□□□ 1.17
KATNB1-209ENST00000569018 RILPL2Q969X0 211 aa22.39■■□□□ 1.17
KATNB1-209ENST00000569018 ARHGAP39Q9C0H5 1083 aa22.39■■□□□ 1.17
KATNB1-209ENST00000569018 NAPBQ9H115 298 aa22.39■■□□□ 1.17
KATNB1-209ENST00000569018 PSMC4P43686 418 aa22.38■■□□□ 1.17
KATNB1-209ENST00000569018 FAM110CQ1W6H9 321 aa22.38■■□□□ 1.17
KATNB1-209ENST00000569018 MCMDC2Q4G0Z9 681 aa22.38■■□□□ 1.17
KATNB1-209ENST00000569018 ZNF287Q9HBT7 754 aa22.38■■□□□ 1.17
KATNB1-209ENST00000569018 FOXP2O15409 715 aa22.37■■□□□ 1.17
KATNB1-209ENST00000569018 PDE4AP27815 886 aa22.37■■□□□ 1.17
KATNB1-209ENST00000569018 CCDC129Q6ZRS4 1044 aa22.37■■□□□ 1.17
KATNB1-209ENST00000569018 GTF3C2Q8WUA4 911 aaPredicted RBP22.37■■□□□ 1.17
KATNB1-209ENST00000569018 TRIM47Q96LD4 638 aa22.37■■□□□ 1.17
KATNB1-209ENST00000569018 FAM227BQ96M60 508 aa22.37■■□□□ 1.17
KATNB1-209ENST00000569018 SH2D4AQ9H788 454 aa22.37■■□□□ 1.17
KATNB1-209ENST00000569018 A0A0D9SFI3 127 aa22.36■■□□□ 1.17
KATNB1-209ENST00000569018 A0A1W2PRG0 241 aa22.36■■□□□ 1.17
KATNB1-209ENST00000569018 SDSP20132 328 aa22.36■■□□□ 1.17
KATNB1-209ENST00000569018 RASA1P20936 1047 aa22.36■■□□□ 1.17
KATNB1-209ENST00000569018 HOXD10P28358 340 aa22.36■■□□□ 1.17
KATNB1-209ENST00000569018 CTGFP29279 349 aa22.36■■□□□ 1.17
KATNB1-209ENST00000569018 FCGRTP55899 365 aa22.36■■□□□ 1.17
KATNB1-209ENST00000569018 ICA1Q05084 483 aa22.36■■□□□ 1.17
KATNB1-209ENST00000569018 ALX1Q15699 326 aa22.36■■□□□ 1.17
KATNB1-209ENST00000569018 ZYXQ15942 572 aaKnown RBP22.36■■□□□ 1.17
KATNB1-209ENST00000569018 ANKRD13CQ8N6S4 541 aa22.36■■□□□ 1.17
KATNB1-209ENST00000569018 KANSL2Q9H9L4 492 aa22.36■■□□□ 1.17
KATNB1-209ENST00000569018 MKNK2Q9HBH9 465 aa22.36■■□□□ 1.17
KATNB1-209ENST00000569018 ARHGEF10LQ9HCE6 1279 aa22.36■■□□□ 1.17
KATNB1-209ENST00000569018 ZSWIM8A7E2V4 1837 aa22.36■■□□□ 1.17
KATNB1-209ENST00000569018 USP17L15C9J2P7 530 aa22.35■■□□□ 1.17
KATNB1-209ENST00000569018 USP17L13C9JLJ4 530 aa22.35■■□□□ 1.17
KATNB1-209ENST00000569018 USP17L11C9JVI0 530 aa22.35■■□□□ 1.17
KATNB1-209ENST00000569018 USP17L18D6R9N7 530 aa22.35■■□□□ 1.17
KATNB1-209ENST00000569018 USP17L22D6RA61 530 aa22.35■■□□□ 1.17
KATNB1-209ENST00000569018 USP17L17D6RBQ6 530 aa22.35■■□□□ 1.17
KATNB1-209ENST00000569018 USP17L19D6RCP7 530 aa22.35■■□□□ 1.17
KATNB1-209ENST00000569018 USP17L20D6RJB6 530 aa22.35■■□□□ 1.17
KATNB1-209ENST00000569018 HIP1O00291 1037 aa22.35■■□□□ 1.17
KATNB1-209ENST00000569018 FMNL1O95466 1100 aaPredicted RBP22.35■■□□□ 1.17
KATNB1-209ENST00000569018 SLC3A2P08195 630 aaKnown RBP22.35■■□□□ 1.17
KATNB1-209ENST00000569018 VCAM1P19320 739 aa22.35■■□□□ 1.17
KATNB1-209ENST00000569018 HERVK_113P62684 666 aa22.35■■□□□ 1.17
KATNB1-209ENST00000569018 USP17L24Q0WX57 530 aa22.35■■□□□ 1.17
KATNB1-209ENST00000569018 NMIQ13287 307 aaPredicted RBP22.35■■□□□ 1.17
KATNB1-209ENST00000569018 SIAH1Q8IUQ4 282 aa22.35■■□□□ 1.17
KATNB1-209ENST00000569018 P2RX7Q99572 595 aaKnown RBP22.35■■□□□ 1.17
KATNB1-209ENST00000569018 MORF4L1Q9UBU8 362 aa22.35■■□□□ 1.17
KATNB1-209ENST00000569018 SRRDQ9UH36 339 aa22.35■■□□□ 1.17
KATNB1-209ENST00000569018 PPARAQ07869 468 aa22.34■■□□□ 1.17
KATNB1-209ENST00000569018 LPAR1Q92633 364 aa22.34■■□□□ 1.17
KATNB1-209ENST00000569018 TMX2Q9Y320 296 aa22.34■■□□□ 1.17
KATNB1-209ENST00000569018 GREB1LQ9C091 1923 aaPredicted RBP22.33■■□□□ 1.17
KATNB1-209ENST00000569018 MFAP1P55081 439 aaKnown RBP22.33■■□□□ 1.17
KATNB1-209ENST00000569018 PDE4BQ07343 736 aa22.33■■□□□ 1.17
KATNB1-209ENST00000569018 VPS53Q5VIR6 699 aa22.33■■□□□ 1.17
KATNB1-209ENST00000569018 CATSPERGQ6ZRH7 1159 aa22.33■■□□□ 1.17
KATNB1-209ENST00000569018 ARMC5Q96C12 935 aa22.33■■□□□ 1.17
KATNB1-209ENST00000569018 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.33■■□□□ 1.17
KATNB1-209ENST00000569018 PTCH2Q9Y6C5 1203 aa22.33■■□□□ 1.17
KATNB1-209ENST00000569018 ZMYM6O95789 1325 aa22.32■■□□□ 1.16
KATNB1-209ENST00000569018 CCDC171Q6TFL3 1326 aa22.32■■□□□ 1.16
KATNB1-209ENST00000569018 TTC22Q5TAA0 569 aa22.32■■□□□ 1.16
KATNB1-209ENST00000569018 CLEC10AQ8IUN9 316 aa22.32■■□□□ 1.16
KATNB1-209ENST00000569018 DIAPH3Q9NSV4 1193 aa22.32■■□□□ 1.16
KATNB1-209ENST00000569018 ANAPC4Q9UJX5 808 aa22.32■■□□□ 1.16
KATNB1-209ENST00000569018 MGAMO43451 1857 aa22.32■■□□□ 1.16
KATNB1-209ENST00000569018 EEF2P13639 858 aaKnown RBP22.31■■□□□ 1.16
KATNB1-209ENST00000569018 LBX2Q6XYB7 198 aa22.31■■□□□ 1.16
KATNB1-209ENST00000569018 ZNF589Q86UQ0 364 aaPredicted RBP22.31■■□□□ 1.16
KATNB1-209ENST00000569018 ZNF444Q8N0Y2 327 aaPredicted RBP22.31■■□□□ 1.16
KATNB1-209ENST00000569018 STK11IPQ8N1F8 1099 aa22.31■■□□□ 1.16
KATNB1-209ENST00000569018 RPAP3Q9H6T3 665 aaPredicted RBP22.31■■□□□ 1.16
KATNB1-209ENST00000569018 VCPKMTQ9H867 229 aa22.31■■□□□ 1.16
KATNB1-209ENST00000569018 HTTP42858 3142 aa22.31■■□□□ 1.16
KATNB1-209ENST00000569018 MYPNQ86TC9 1320 aa22.31■■□□□ 1.16
KATNB1-209ENST00000569018 PLIN4Q96Q06 1357 aa22.3■■□□□ 1.16
KATNB1-209ENST00000569018 TNPO2O14787 897 aaKnown RBP22.3■■□□□ 1.16
KATNB1-209ENST00000569018 HSPD1P10809 573 aaKnown RBP22.3■■□□□ 1.16
KATNB1-209ENST00000569018 NYAP2Q9P242 653 aa22.3■■□□□ 1.16
KATNB1-209ENST00000569018 IGKV6D-41A0A0C4DH26 115 aa22.29■■□□□ 1.16
KATNB1-209ENST00000569018 PRDM1O75626 825 aa22.29■■□□□ 1.16
KATNB1-209ENST00000569018 ECM2O94769 699 aaPredicted RBP22.29■■□□□ 1.16
KATNB1-209ENST00000569018 GSPT1P15170 499 aaKnown RBP22.29■■□□□ 1.16
KATNB1-209ENST00000569018 RGS19P49795 217 aa22.29■■□□□ 1.16
KATNB1-209ENST00000569018 SLC9C1Q4G0N8 1177 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms