RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 SPP2Q13103 211 aa19.78■□□□□ 0.76
COMMD4-224ENST00000568877 RASEFQ8IZ41 740 aa19.78■□□□□ 0.76
COMMD4-224ENST00000568877 NCOA7Q8NI08 942 aa19.78■□□□□ 0.76
COMMD4-224ENST00000568877 KCNH4Q9UQ05 1017 aa19.78■□□□□ 0.76
COMMD4-224ENST00000568877 ATAD5Q96QE3 1844 aa19.78■□□□□ 0.76
COMMD4-224ENST00000568877 MYH8P13535 1937 aa19.77■□□□□ 0.76
COMMD4-224ENST00000568877 CXCL11O14625 94 aa19.77■□□□□ 0.76
COMMD4-224ENST00000568877 ICA1Q05084 483 aa19.77■□□□□ 0.76
COMMD4-224ENST00000568877 NOGQ13253 232 aa19.77■□□□□ 0.76
COMMD4-224ENST00000568877 KRT32Q14532 448 aa19.77■□□□□ 0.76
COMMD4-224ENST00000568877 RALYLQ86SE5 291 aaKnown RBP19.77■□□□□ 0.76
COMMD4-224ENST00000568877 ZSWIM5Q9P217 1185 aa19.77■□□□□ 0.76
COMMD4-224ENST00000568877 TRIM75PA6NK02 468 aa19.76■□□□□ 0.75
COMMD4-224ENST00000568877 AOC2O75106 756 aa19.76■□□□□ 0.75
COMMD4-224ENST00000568877 EEF2P13639 858 aaKnown RBP19.76■□□□□ 0.75
COMMD4-224ENST00000568877 GTF2A2P52657 109 aa19.76■□□□□ 0.75
COMMD4-224ENST00000568877 SNAPC2Q13487 334 aa19.76■□□□□ 0.75
COMMD4-224ENST00000568877 CLEC10AQ8IUN9 316 aa19.76■□□□□ 0.75
COMMD4-224ENST00000568877 SIAH1Q8IUQ4 282 aa19.76■□□□□ 0.75
COMMD4-224ENST00000568877 ACER1Q8TDN7 264 aa19.76■□□□□ 0.75
COMMD4-224ENST00000568877 CEP95Q96GE4 821 aa19.76■□□□□ 0.75
COMMD4-224ENST00000568877 IL17RBQ9NRM6 502 aa19.76■□□□□ 0.75
COMMD4-224ENST00000568877 TCP11L1Q9NUJ3 509 aa19.76■□□□□ 0.75
COMMD4-224ENST00000568877 MTMR4Q9NYA4 1195 aa19.76■□□□□ 0.75
COMMD4-224ENST00000568877 SNX14Q9Y5W7 946 aa19.76■□□□□ 0.75
COMMD4-224ENST00000568877 USP17L10C9JJH3 530 aa19.75■□□□□ 0.75
COMMD4-224ENST00000568877 NMT2O60551 498 aa19.75■□□□□ 0.75
COMMD4-224ENST00000568877 MS4A4AQ96JQ5 239 aa19.75■□□□□ 0.75
COMMD4-224ENST00000568877 ARHGEF10LQ9HCE6 1279 aa19.75■□□□□ 0.75
COMMD4-224ENST00000568877 NYAP2Q9P242 653 aa19.75■□□□□ 0.75
COMMD4-224ENST00000568877 A0A1W2PRG0 241 aa19.74■□□□□ 0.75
COMMD4-224ENST00000568877 MANSC4A6NHS7 340 aaPredicted RBP19.74■□□□□ 0.75
COMMD4-224ENST00000568877 TTLL1O95922 423 aa19.74■□□□□ 0.75
COMMD4-224ENST00000568877 MAP2K2P36507 400 aa19.74■□□□□ 0.75
COMMD4-224ENST00000568877 BACE1P56817 501 aa19.74■□□□□ 0.75
COMMD4-224ENST00000568877 ATP2B2Q01814 1243 aa19.74■□□□□ 0.75
COMMD4-224ENST00000568877 KIF23Q02241 960 aaPredicted RBP19.74■□□□□ 0.75
COMMD4-224ENST00000568877 MTMR2Q13614 643 aa19.74■□□□□ 0.75
COMMD4-224ENST00000568877 PPP4R3BQ5MIZ7 849 aa19.74■□□□□ 0.75
COMMD4-224ENST00000568877 CYB5R4Q7L1T6 521 aa19.74■□□□□ 0.75
COMMD4-224ENST00000568877 IQCA1Q86XH1 822 aa19.74■□□□□ 0.75
COMMD4-224ENST00000568877 MB21D2Q8IYB1 491 aaPredicted RBP19.74■□□□□ 0.75
COMMD4-224ENST00000568877 DNAJC5GQ8N7S2 189 aa19.74■□□□□ 0.75
COMMD4-224ENST00000568877 NEK1Q96PY6 1258 aa19.74■□□□□ 0.75
COMMD4-224ENST00000568877 ZIC5Q96T25 663 aa19.74■□□□□ 0.75
COMMD4-224ENST00000568877 FEZ1Q99689 392 aa19.74■□□□□ 0.75
COMMD4-224ENST00000568877 ZKSCAN3Q9BRR0 538 aa19.74■□□□□ 0.75
COMMD4-224ENST00000568877 CLIP2Q9UDT6 1046 aa19.74■□□□□ 0.75
COMMD4-224ENST00000568877 GREB1LQ9C091 1923 aaPredicted RBP19.74■□□□□ 0.75
COMMD4-224ENST00000568877 A0A0G2JLL6 359 aaPredicted RBP19.73■□□□□ 0.75
COMMD4-224ENST00000568877 C19orf81C9J6K1 198 aa19.73■□□□□ 0.75
COMMD4-224ENST00000568877 CETPP11597 493 aa19.73■□□□□ 0.75
COMMD4-224ENST00000568877 NOVP48745 357 aa19.73■□□□□ 0.75
COMMD4-224ENST00000568877 ADCK5Q3MIX3 580 aa19.73■□□□□ 0.75
COMMD4-224ENST00000568877 PRRT2Q7Z6L0 340 aaPredicted RBP19.73■□□□□ 0.75
COMMD4-224ENST00000568877 MKL1Q969V6 931 aa19.73■□□□□ 0.75
COMMD4-224ENST00000568877 BACH2Q9BYV9 841 aa19.73■□□□□ 0.75
COMMD4-224ENST00000568877 KIAA1683Q9H0B3 1180 aa19.73■□□□□ 0.75
COMMD4-224ENST00000568877 SH2D4AQ9H788 454 aa19.73■□□□□ 0.75
COMMD4-224ENST00000568877 STX8Q9UNK0 236 aa19.73■□□□□ 0.75
COMMD4-224ENST00000568877 PHIPQ8WWQ0 1821 aa19.73■□□□□ 0.75
COMMD4-224ENST00000568877 CCL15-CCL14A0A0B4J2E2 113 aa19.72■□□□□ 0.75
COMMD4-224ENST00000568877 TESPA1A2RU30 521 aaPredicted RBP19.72■□□□□ 0.75
COMMD4-224ENST00000568877 INHBEP58166 350 aa19.72■□□□□ 0.75
COMMD4-224ENST00000568877 CCL15Q16663 113 aa19.72■□□□□ 0.75
COMMD4-224ENST00000568877 CCDC178Q5BJE1 867 aa19.72■□□□□ 0.75
COMMD4-224ENST00000568877 SH3D19Q5HYK7 790 aa19.72■□□□□ 0.75
COMMD4-224ENST00000568877 USP17L2Q6R6M4 530 aa19.72■□□□□ 0.75
COMMD4-224ENST00000568877 REM2Q8IYK8 340 aaPredicted RBP19.72■□□□□ 0.75
COMMD4-224ENST00000568877 ZSCAN10Q96SZ4 725 aaPredicted RBP19.72■□□□□ 0.75
COMMD4-224ENST00000568877 UBAC1Q9BSL1 405 aa19.72■□□□□ 0.75
COMMD4-224ENST00000568877 TMX2Q9Y320 296 aa19.72■□□□□ 0.75
COMMD4-224ENST00000568877 MCM5P33992 734 aa19.71■□□□□ 0.75
COMMD4-224ENST00000568877 USP14P54578 494 aa19.71■□□□□ 0.75
COMMD4-224ENST00000568877 HMGCS2P54868 508 aa19.71■□□□□ 0.75
COMMD4-224ENST00000568877 SREBF2Q12772 1141 aa19.71■□□□□ 0.75
COMMD4-224ENST00000568877 ZYXQ15942 572 aaKnown RBP19.71■□□□□ 0.75
COMMD4-224ENST00000568877 FASTKD5Q7L8L6 764 aaKnown RBP19.71■□□□□ 0.75
COMMD4-224ENST00000568877 CHST3Q7LGC8 479 aa19.71■□□□□ 0.75
COMMD4-224ENST00000568877 DGKHQ86XP1 1220 aa19.71■□□□□ 0.75
COMMD4-224ENST00000568877 BRI3BPQ8WY22 251 aa19.71■□□□□ 0.75
COMMD4-224ENST00000568877 JAKMIP1Q96N16 626 aaKnown RBP19.71■□□□□ 0.75
COMMD4-224ENST00000568877 TTC14Q96N46 770 aa19.71■□□□□ 0.75
COMMD4-224ENST00000568877 EMILIN3Q9NT22 766 aa19.71■□□□□ 0.75
COMMD4-224ENST00000568877 SYNPO2Q9UMS6 1093 aa19.71■□□□□ 0.75
COMMD4-224ENST00000568877 HMGB1P09429 215 aaKnown RBP19.7■□□□□ 0.74
COMMD4-224ENST00000568877 PSMA5P28066 241 aa19.7■□□□□ 0.74
COMMD4-224ENST00000568877 TM4SF4P48230 202 aa19.7■□□□□ 0.74
COMMD4-224ENST00000568877 ANTXR2P58335 489 aa19.7■□□□□ 0.74
COMMD4-224ENST00000568877 ANAPC15P60006 121 aa19.7■□□□□ 0.74
COMMD4-224ENST00000568877 DGKZQ13574 1117 aa19.7■□□□□ 0.74
COMMD4-224ENST00000568877 MOGSQ13724 837 aa19.7■□□□□ 0.74
COMMD4-224ENST00000568877 COL9A3Q14050 684 aaPredicted RBP19.7■□□□□ 0.74
COMMD4-224ENST00000568877 RCSD1Q6JBY9 416 aa19.7■□□□□ 0.74
COMMD4-224ENST00000568877 C12orf42Q96LP6 360 aa19.7■□□□□ 0.74
COMMD4-224ENST00000568877 VCPKMTQ9H867 229 aa19.7■□□□□ 0.74
COMMD4-224ENST00000568877 TMOD4Q9NZQ9 345 aa19.7■□□□□ 0.74
COMMD4-224ENST00000568877 TNKSO95271 1327 aa19.7■□□□□ 0.74
COMMD4-224ENST00000568877 IFIT3O14879 490 aaKnown RBP19.69■□□□□ 0.74
COMMD4-224ENST00000568877 PRC1O43663 620 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms