RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 SRCIN1Q9C0H9 1055 aa11.94□□□□□ -0.5
KARS-209ENST00000568378 RABGAP1Q9Y3P9 1069 aa11.94□□□□□ -0.5
KARS-209ENST00000568378 CACNA1FO60840 1977 aa11.94□□□□□ -0.5
KARS-209ENST00000568378 ASNSP08243 561 aa11.93□□□□□ -0.5
KARS-209ENST00000568378 GRB14Q14449 540 aa11.93□□□□□ -0.5
KARS-209ENST00000568378 RAB30Q15771 203 aa11.93□□□□□ -0.5
KARS-209ENST00000568378 DPP9Q86TI2 863 aa11.93□□□□□ -0.5
KARS-209ENST00000568378 SLC44A5Q8NCS7 719 aa11.93□□□□□ -0.5
KARS-209ENST00000568378 ABCF2Q9UG63 623 aa11.93□□□□□ -0.5
KARS-209ENST00000568378 MROH7-TTC4A0A0A0MT08 1334 aa11.92□□□□□ -0.5
KARS-209ENST00000568378 SEMA3EO15041 775 aa11.92□□□□□ -0.5
KARS-209ENST00000568378 NBPF7P0C2Y1 421 aaPredicted RBP11.92□□□□□ -0.5
KARS-209ENST00000568378 PPIGQ13427 754 aaKnown RBP eCLIP11.92□□□□□ -0.5
KARS-209ENST00000568378 RABL6Q3YEC7 729 aaPredicted RBP11.92□□□□□ -0.5
KARS-209ENST00000568378 SLC28A3Q9HAS3 691 aa11.92□□□□□ -0.5
KARS-209ENST00000568378 HERC5Q9UII4 1024 aaKnown RBP11.92□□□□□ -0.5
KARS-209ENST00000568378 PHF24Q9UPV7 400 aa11.92□□□□□ -0.5
KARS-209ENST00000568378 DCDC2CA8MYV0 355 aa11.91□□□□□ -0.5
KARS-209ENST00000568378 SMIM22K7EJ46 135 aa11.91□□□□□ -0.5
KARS-209ENST00000568378 CNMDO75829 334 aa11.91□□□□□ -0.5
KARS-209ENST00000568378 FAM47AQ5JRC9 791 aa11.91□□□□□ -0.5
KARS-209ENST00000568378 OLFML2BQ68BL8 750 aa11.91□□□□□ -0.5
KARS-209ENST00000568378 USP17L2Q6R6M4 530 aa11.91□□□□□ -0.5
KARS-209ENST00000568378 FAM163AQ96GL9 167 aaPredicted RBP11.91□□□□□ -0.5
KARS-209ENST00000568378 TRIM34Q9BYJ4 488 aa11.91□□□□□ -0.5
KARS-209ENST00000568378 NKX2-4Q9H2Z4 354 aa11.91□□□□□ -0.5
KARS-209ENST00000568378 C11orf16Q9NQ32 467 aa11.91□□□□□ -0.5
KARS-209ENST00000568378 XIRP2A4UGR9 3374 aa11.9□□□□□ -0.5
KARS-209ENST00000568378 EYA2O00167 538 aa11.9□□□□□ -0.5
KARS-209ENST00000568378 APBB1O00213 710 aa11.9□□□□□ -0.5
KARS-209ENST00000568378 ERC2O15083 957 aa11.9□□□□□ -0.5
KARS-209ENST00000568378 TIMP1P01033 207 aa11.9□□□□□ -0.5
KARS-209ENST00000568378 PHKA1P46020 1223 aa11.9□□□□□ -0.5
KARS-209ENST00000568378 RHBDL3P58872 404 aa11.9□□□□□ -0.5
KARS-209ENST00000568378 ATP2B3Q16720 1220 aa11.9□□□□□ -0.5
KARS-209ENST00000568378 SPTY2D1Q68D10 685 aaPredicted RBP11.9□□□□□ -0.5
KARS-209ENST00000568378 RNF180Q86T96 592 aa11.9□□□□□ -0.5
KARS-209ENST00000568378 ANKRD44Q8N8A2 993 aa11.9□□□□□ -0.5
KARS-209ENST00000568378 HERVK_113Q902F9 699 aa11.9□□□□□ -0.5
KARS-209ENST00000568378 XPNPEP3Q9NQH7 507 aa11.9□□□□□ -0.5
KARS-209ENST00000568378 GPR75-ASB3A0A0A6YYF3 556 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 A0A1W2PQ45 241 aaPredicted RBP11.89□□□□□ -0.51
KARS-209ENST00000568378 A0A1W2PQY0 241 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 USP17L15C9J2P7 530 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 USP17L13C9JLJ4 530 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 USP17L11C9JVI0 530 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 USP17L18D6R9N7 530 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 USP17L22D6RA61 530 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 USP17L17D6RBQ6 530 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 USP17L19D6RCP7 530 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 USP17L20D6RJB6 530 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 RARBP10826 455 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 FAAP100Q0VG06 881 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 USP17L24Q0WX57 530 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 TMEM240Q5SV17 173 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 PRAMEF19Q5SWL8 479 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 MFSD5Q6N075 450 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 PSRC1Q6PGN9 363 aaPredicted RBP11.89□□□□□ -0.51
KARS-209ENST00000568378 FEZ1Q99689 392 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 MTIF3Q9H2K0 278 aaKnown RBP11.89□□□□□ -0.51
KARS-209ENST00000568378 EMILIN3Q9NT22 766 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 PI4KBQ9UBF8 816 aa11.89□□□□□ -0.51
KARS-209ENST00000568378 CHD9Q3L8U1 2897 aa11.88□□□□□ -0.51
KARS-209ENST00000568378 VAMP4O75379 141 aa11.88□□□□□ -0.51
KARS-209ENST00000568378 GDF11O95390 407 aa11.88□□□□□ -0.51
KARS-209ENST00000568378 MAP4K4O95819 1239 aaPredicted RBP11.88□□□□□ -0.51
KARS-209ENST00000568378 ADORA2AP29274 412 aa11.88□□□□□ -0.51
KARS-209ENST00000568378 ZYXQ15942 572 aaKnown RBP11.88□□□□□ -0.51
KARS-209ENST00000568378 RASIP1Q5U651 963 aa11.88□□□□□ -0.51
KARS-209ENST00000568378 ERICH6Q7L0X2 663 aa11.88□□□□□ -0.51
KARS-209ENST00000568378 CRACR2BQ8N4Y2 399 aaPredicted RBP11.88□□□□□ -0.51
KARS-209ENST00000568378 KHSRPQ92945 711 aaKnown RBP eCLIP11.88□□□□□ -0.51
KARS-209ENST00000568378 TOX2Q96NM4 488 aa11.88□□□□□ -0.51
KARS-209ENST00000568378 UIMC1Q96RL1 719 aa11.88□□□□□ -0.51
KARS-209ENST00000568378 SLC5A4Q9NY91 659 aa11.88□□□□□ -0.51
KARS-209ENST00000568378 LRRC37A2A6NM11 1700 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 PRR33A8MZF0 331 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 GTPBP6O43824 516 aaPredicted RBP11.87□□□□□ -0.51
KARS-209ENST00000568378 PGK1P00558 417 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 IGHA2P01877 340 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 ACRP10323 421 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 CSF2RAP15509 400 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 GSTO1P78417 241 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 JAG1P78504 1218 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 NHLH1Q02575 133 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 MECOMQ03112 1051 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 SHROOM1Q2M3G4 852 aaPredicted RBP11.87□□□□□ -0.51
KARS-209ENST00000568378 PPP2R2DQ66LE6 453 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 ZNF365Q70YC5 407 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 C16orf59Q7L2K0 433 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 ANKRD33Q7Z3H0 272 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 TEX11Q8IYF3 940 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 TMEM199Q8N511 208 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 STARD7Q9NQZ5 370 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 GINM1Q9NU53 330 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 BTBD7Q9P203 1132 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 CEP126Q9P2H0 1117 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 ZBTB21Q9ULJ3 1066 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 COG5Q9UP83 839 aa11.87□□□□□ -0.51
KARS-209ENST00000568378 FANCIQ9NVI1 1328 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms