RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 GABRQQ9UN88 632 aa30.23■■■□□ 2.43
FANCA-228ENST00000567943 MYPNQ86TC9 1320 aa30.22■■■□□ 2.43
FANCA-228ENST00000567943 GSG1L2A8MUP6 293 aa30.22■■■□□ 2.43
FANCA-228ENST00000567943 M0R2C6 588 aa30.22■■■□□ 2.43
FANCA-228ENST00000567943 GCLCP48506 637 aaPredicted RBP30.22■■■□□ 2.43
FANCA-228ENST00000567943 PRKCZQ05513 592 aa30.22■■■□□ 2.43
FANCA-228ENST00000567943 LRRFIP1Q32MZ4 808 aaKnown RBP30.22■■■□□ 2.43
FANCA-228ENST00000567943 CTR9Q6PD62 1173 aa30.22■■■□□ 2.43
FANCA-228ENST00000567943 USP17L2Q6R6M4 530 aa30.22■■■□□ 2.43
FANCA-228ENST00000567943 CHD1LQ86WJ1 897 aa30.22■■■□□ 2.43
FANCA-228ENST00000567943 C12orf42Q96LP6 360 aa30.22■■■□□ 2.43
FANCA-228ENST00000567943 FSD1Q9BTV5 496 aa30.22■■■□□ 2.43
FANCA-228ENST00000567943 CABP5Q9NP86 173 aa30.22■■■□□ 2.43
FANCA-228ENST00000567943 SWAP70Q9UH65 585 aa30.22■■■□□ 2.43
FANCA-228ENST00000567943 PEX10O60683 326 aa30.21■■■□□ 2.43
FANCA-228ENST00000567943 NUCB1Q02818 461 aa30.21■■■□□ 2.43
FANCA-228ENST00000567943 ZYXQ15942 572 aaKnown RBP30.21■■■□□ 2.43
FANCA-228ENST00000567943 KIAA1683Q9H0B3 1180 aa30.21■■■□□ 2.43
FANCA-228ENST00000567943 HOXD10P28358 340 aa30.2■■■□□ 2.43
FANCA-228ENST00000567943 SEC62Q99442 399 aaKnown RBP30.2■■■□□ 2.43
FANCA-228ENST00000567943 TAOK2Q9UL54 1235 aa30.2■■■□□ 2.43
FANCA-228ENST00000567943 A0A1W2PRG0 241 aa30.19■■■□□ 2.42
FANCA-228ENST00000567943 GPAA1O43292 621 aa30.19■■■□□ 2.42
FANCA-228ENST00000567943 CDK8P49336 464 aa30.19■■■□□ 2.42
FANCA-228ENST00000567943 SIAH1Q8IUQ4 282 aa30.19■■■□□ 2.42
FANCA-228ENST00000567943 TXNRD2Q9NNW7 524 aa30.19■■■□□ 2.42
FANCA-228ENST00000567943 MPHOSPH10O00566 681 aaKnown RBP30.18■■■□□ 2.42
FANCA-228ENST00000567943 AKR1B1P15121 316 aa30.18■■■□□ 2.42
FANCA-228ENST00000567943 HERVK_113P62684 666 aa30.18■■■□□ 2.42
FANCA-228ENST00000567943 IRX3P78415 501 aaPredicted RBP30.18■■■□□ 2.42
FANCA-228ENST00000567943 C16orf86Q6ZW13 317 aa30.18■■■□□ 2.42
FANCA-228ENST00000567943 NBPF11Q86T75 865 aa30.18■■■□□ 2.42
FANCA-228ENST00000567943 DDRGK1Q96HY6 314 aa30.18■■■□□ 2.42
FANCA-228ENST00000567943 FEZ1Q99689 392 aa30.18■■■□□ 2.42
FANCA-228ENST00000567943 EPB41L4AQ9HCS5 686 aaPredicted RBP30.18■■■□□ 2.42
FANCA-228ENST00000567943 MORF4L1Q9UBU8 362 aa30.18■■■□□ 2.42
FANCA-228ENST00000567943 PDE4DIPQ5VU43 2346 aa30.18■■■□□ 2.42
FANCA-228ENST00000567943 CLEC10AQ8IUN9 316 aa30.17■■■□□ 2.42
FANCA-228ENST00000567943 PLXNB2O15031 1838 aa30.17■■■□□ 2.42
FANCA-228ENST00000567943 TNPO2O14787 897 aaKnown RBP30.16■■■□□ 2.42
FANCA-228ENST00000567943 MYCP01106 439 aaPredicted RBP30.16■■■□□ 2.42
FANCA-228ENST00000567943 VCAM1P19320 739 aa30.16■■■□□ 2.42
FANCA-228ENST00000567943 FLT3LGP49771 235 aa30.16■■■□□ 2.42
FANCA-228ENST00000567943 GIMAP6Q6P9H5 292 aa30.16■■■□□ 2.42
FANCA-228ENST00000567943 TMEM179Q6ZVK1 233 aa30.16■■■□□ 2.42
FANCA-228ENST00000567943 RAET1EQ8TD07 263 aa30.16■■■□□ 2.42
FANCA-228ENST00000567943 RBPJLQ9UBG7 517 aa30.16■■■□□ 2.42
FANCA-228ENST00000567943 USP14P54578 494 aa30.15■■■□□ 2.42
FANCA-228ENST00000567943 SBK1Q52WX2 424 aa30.15■■■□□ 2.42
FANCA-228ENST00000567943 ZMYM1Q5SVZ6 1142 aa30.15■■■□□ 2.42
FANCA-228ENST00000567943 AMOTL1Q8IY63 956 aa30.15■■■□□ 2.42
FANCA-228ENST00000567943 EVI5LQ96CN4 794 aa30.15■■■□□ 2.42
FANCA-228ENST00000567943 ARPP21Q9UBL0 812 aaPredicted RBP30.15■■■□□ 2.42
FANCA-228ENST00000567943 GREB1LQ9C091 1923 aaPredicted RBP30.15■■■□□ 2.42
FANCA-228ENST00000567943 RLFQ13129 1914 aa30.14■■■□□ 2.42
FANCA-228ENST00000567943 EN2P19622 333 aaPredicted RBP30.14■■■□□ 2.42
FANCA-228ENST00000567943 GRK4P32298 578 aa30.14■■■□□ 2.42
FANCA-228ENST00000567943 MTFR1Q15390 333 aa30.14■■■□□ 2.42
FANCA-228ENST00000567943 KIAA1755Q5JYT7 1200 aa30.14■■■□□ 2.42
FANCA-228ENST00000567943 CATSPERGQ6ZRH7 1159 aa30.13■■■□□ 2.41
FANCA-228ENST00000567943 PLEKHM2Q8IWE5 1019 aa30.13■■■□□ 2.41
FANCA-228ENST00000567943 USP17L15C9J2P7 530 aa30.12■■■□□ 2.41
FANCA-228ENST00000567943 USP17L13C9JLJ4 530 aa30.12■■■□□ 2.41
FANCA-228ENST00000567943 USP17L11C9JVI0 530 aa30.12■■■□□ 2.41
FANCA-228ENST00000567943 USP17L18D6R9N7 530 aa30.12■■■□□ 2.41
FANCA-228ENST00000567943 USP17L22D6RA61 530 aa30.12■■■□□ 2.41
FANCA-228ENST00000567943 USP17L17D6RBQ6 530 aa30.12■■■□□ 2.41
FANCA-228ENST00000567943 USP17L19D6RCP7 530 aa30.12■■■□□ 2.41
FANCA-228ENST00000567943 USP17L20D6RJB6 530 aa30.12■■■□□ 2.41
FANCA-228ENST00000567943 USP17L24Q0WX57 530 aa30.12■■■□□ 2.41
FANCA-228ENST00000567943 Q3C1V9 767 aa30.12■■■□□ 2.41
FANCA-228ENST00000567943 CCDC17Q96LX7 622 aa30.12■■■□□ 2.41
FANCA-228ENST00000567943 GJD2Q9UKL4 321 aa30.12■■■□□ 2.41
FANCA-228ENST00000567943 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.11■■■□□ 2.41
FANCA-228ENST00000567943 ROBO3Q96MS0 1386 aa30.11■■■□□ 2.41
FANCA-228ENST00000567943 PATL2C9JE40 543 aaKnown RBP30.1■■■□□ 2.41
FANCA-228ENST00000567943 GNAT2P19087 354 aa30.1■■■□□ 2.41
FANCA-228ENST00000567943 IRF5Q13568 498 aa30.1■■■□□ 2.41
FANCA-228ENST00000567943 GPRC5AQ8NFJ5 357 aa30.1■■■□□ 2.41
FANCA-228ENST00000567943 COA7Q96BR5 231 aa30.1■■■□□ 2.41
FANCA-228ENST00000567943 TMEM106CQ9BVX2 250 aa30.1■■■□□ 2.41
FANCA-228ENST00000567943 RPAP3Q9H6T3 665 aaPredicted RBP30.1■■■□□ 2.41
FANCA-228ENST00000567943 MINDY4BA8MYZ0 360 aa30.09■■■□□ 2.41
FANCA-228ENST00000567943 TRIM6-TRIM34B2RNG4 842 aa30.09■■■□□ 2.41
FANCA-228ENST00000567943 FOXP2O15409 715 aa30.09■■■□□ 2.41
FANCA-228ENST00000567943 ADCY3O60266 1144 aa30.09■■■□□ 2.41
FANCA-228ENST00000567943 CNMDO75829 334 aa30.09■■■□□ 2.41
FANCA-228ENST00000567943 ELNP15502 786 aa30.09■■■□□ 2.41
FANCA-228ENST00000567943 ERVK-9P63128 1117 aa30.09■■■□□ 2.41
FANCA-228ENST00000567943 ERVK-24P63145 666 aa30.09■■■□□ 2.41
FANCA-228ENST00000567943 IFNL3Q8IZI9 196 aa30.09■■■□□ 2.41
FANCA-228ENST00000567943 SLAIN1Q8ND83 568 aa30.09■■■□□ 2.41
FANCA-228ENST00000567943 OSBPL3Q9H4L5 887 aa30.09■■■□□ 2.41
FANCA-228ENST00000567943 PARP14Q460N5 1801 aa30.08■■■□□ 2.41
FANCA-228ENST00000567943 APPP05067 770 aa30.08■■■□□ 2.41
FANCA-228ENST00000567943 RASA1P20936 1047 aa30.08■■■□□ 2.41
FANCA-228ENST00000567943 ICA1Q05084 483 aa30.08■■■□□ 2.41
FANCA-228ENST00000567943 CCDC129Q6ZRS4 1044 aa30.08■■■□□ 2.41
FANCA-228ENST00000567943 STK11IPQ8N1F8 1099 aa30.08■■■□□ 2.41
FANCA-228ENST00000567943 PORCNQ9H237 461 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms