RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 RNF40O75150 1001 aa11.82□□□□□ -0.52
USB1-212ENST00000566082 CCT5P48643 541 aa11.82□□□□□ -0.52
USB1-212ENST00000566082 ANKRD18AQ8IVF6 992 aa11.82□□□□□ -0.52
USB1-212ENST00000566082 FANCBQ8NB91 859 aa11.82□□□□□ -0.52
USB1-212ENST00000566082 SECISBP2LQ93073 1101 aaKnown RBP11.82□□□□□ -0.52
USB1-212ENST00000566082 TEX13AQ9BXU3 409 aaPredicted RBP11.82□□□□□ -0.52
USB1-212ENST00000566082 TMEM266Q2M3C6 531 aa11.82□□□□□ -0.52
USB1-212ENST00000566082 SPTY2D1Q68D10 685 aaPredicted RBP11.82□□□□□ -0.52
USB1-212ENST00000566082 DYDC1Q8WWB3 177 aa11.82□□□□□ -0.52
USB1-212ENST00000566082 INCENPQ9NQS7 918 aa11.82□□□□□ -0.52
USB1-212ENST00000566082 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.82□□□□□ -0.52
USB1-212ENST00000566082 DIP2BQ9P265 1576 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 ERCC5P28715 1186 aaPredicted RBP11.81□□□□□ -0.52
USB1-212ENST00000566082 EXOSC10Q01780 885 aaKnown RBP11.81□□□□□ -0.52
USB1-212ENST00000566082 PDE4DQ08499 809 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 DDX17Q92841 729 aaKnown RBP11.81□□□□□ -0.52
USB1-212ENST00000566082 FERMT2Q96AC1 680 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 MED4Q9NPJ6 270 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 TRIM66O15016 1216 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 CALML3P27482 149 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 PLA2G4AP47712 749 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 KCNB2Q92953 911 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 EPSTI1Q96J88 318 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 SPAG5Q96R06 1193 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 RAB34Q9BZG1 259 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 JAG2Q9Y219 1238 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 TEX33O43247 280 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 ATP1A2P50993 1020 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 GNGT1P63211 74 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 ARHGEF25Q86VW2 580 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 L2HGDHQ9H9P8 463 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 NRKQ7Z2Y5 1582 aa11.81□□□□□ -0.52
USB1-212ENST00000566082 USP32Q8NFA0 1604 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 FDPSP14324 419 aaKnown RBP11.8□□□□□ -0.52
USB1-212ENST00000566082 PHKA1P46020 1223 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 PUM3Q15397 648 aaKnown RBP11.8□□□□□ -0.52
USB1-212ENST00000566082 RESP18Q5W5W9 173 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 FAM207AQ9NSI2 230 aaPredicted RBP11.8□□□□□ -0.52
USB1-212ENST00000566082 BICDL2A1A5D9 508 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 SH2B2O14492 632 aaPredicted RBP11.8□□□□□ -0.52
USB1-212ENST00000566082 CALM1P0DP23 149 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 CALM2P0DP24 149 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 CALM3P0DP25 149 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 CDC25AP30304 524 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 COPB1P53618 953 aaKnown RBP11.8□□□□□ -0.52
USB1-212ENST00000566082 PTGDRQ13258 359 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 DNAJC10Q8IXB1 793 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 ANKRD13CQ8N6S4 541 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 SPATA5Q8NB90 893 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 CCDC114Q96M63 670 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 HAUS4Q9H6D7 363 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 GPR108Q9NPR9 543 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 ZSWIM5Q9P217 1185 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 MRFAP1Q9Y605 127 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 FHOD1Q9Y613 1164 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 PARP3Q9Y6F1 533 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.8□□□□□ -0.52
USB1-212ENST00000566082 PRR29P0C7W0 189 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 H2AFXP16104 143 aaPredicted RBP11.8□□□□□ -0.52
USB1-212ENST00000566082 MAGEA1P43355 309 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 TYW1BQ6NUM6 668 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 SDR42E1Q8WUS8 393 aa11.8□□□□□ -0.52
USB1-212ENST00000566082 CCDC43Q96MW1 224 aaKnown RBP11.8□□□□□ -0.52
USB1-212ENST00000566082 CRNKL1Q9BZJ0 848 aaKnown RBP11.8□□□□□ -0.52
USB1-212ENST00000566082 TCIRG1Q13488 830 aa11.79□□□□□ -0.52
USB1-212ENST00000566082 LETM2Q2VYF4 491 aa11.79□□□□□ -0.52
USB1-212ENST00000566082 VPS36Q86VN1 386 aa11.79□□□□□ -0.52
USB1-212ENST00000566082 TICAM2Q86XR7 235 aa11.79□□□□□ -0.52
USB1-212ENST00000566082 TMX4Q9H1E5 349 aaPredicted RBP11.79□□□□□ -0.52
USB1-212ENST00000566082 VWDEQ8N2E2 1590 aa11.79□□□□□ -0.52
USB1-212ENST00000566082 ZPR1O75312 459 aa11.79□□□□□ -0.52
USB1-212ENST00000566082 MMP1P03956 469 aa11.79□□□□□ -0.52
USB1-212ENST00000566082 NAPAP54920 295 aa11.79□□□□□ -0.52
USB1-212ENST00000566082 SF3A3Q12874 501 aaKnown RBP eCLIP11.79□□□□□ -0.52
USB1-212ENST00000566082 E2F4Q16254 413 aa11.79□□□□□ -0.52
USB1-212ENST00000566082 CCDC152Q4G0S7 254 aa11.79□□□□□ -0.52
USB1-212ENST00000566082 METTL16Q86W50 562 aaKnown RBP11.79□□□□□ -0.52
USB1-212ENST00000566082 DZIP3Q86Y13 1208 aaKnown RBP11.79□□□□□ -0.52
USB1-212ENST00000566082 DEPDC5O75140 1603 aa11.79□□□□□ -0.52
USB1-212ENST00000566082 TNKSO95271 1327 aa11.79□□□□□ -0.52
USB1-212ENST00000566082 USP31Q70CQ4 1352 aa11.79□□□□□ -0.52
USB1-212ENST00000566082 MRPS25P82663 173 aaKnown RBP11.79□□□□□ -0.52
USB1-212ENST00000566082 PPFIA1Q13136 1202 aa11.79□□□□□ -0.52
USB1-212ENST00000566082 CCDC121Q6ZUS5 278 aa11.79□□□□□ -0.52
USB1-212ENST00000566082 C2CD5Q86YS7 1000 aa11.79□□□□□ -0.52
USB1-212ENST00000566082 KAZALD1Q96I82 304 aa11.79□□□□□ -0.52
USB1-212ENST00000566082 OVOS2A0A0J9YW53 1432 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 OVOS2Q6IE36 1432 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 KIDINS220Q9ULH0 1771 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 CDC27P30260 824 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 KCTD16Q68DU8 428 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 GBP6Q6ZN66 633 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 LPIN2Q92539 896 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 PANX2Q96RD6 677 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 IFIH1Q9BYX4 1025 aaKnown RBP11.78□□□□□ -0.52
USB1-212ENST00000566082 ADGRG1Q9Y653 693 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 MFAP3LO75121 409 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 CYB5R4Q7L1T6 521 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 CCDC91Q7Z6B0 441 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 TBC1D10CQ8IV04 446 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms