RNA–Protein interactions for RNA: ENST00000565908.6

TCF4-230, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-230ENST00000565908 TMEM179Q6ZVK1 233 aa28.82■■■□□ 2.2
TCF4-230ENST00000565908 C16orf86Q6ZW13 317 aa28.82■■■□□ 2.2
TCF4-230ENST00000565908 NBPF11Q86T75 865 aa28.82■■■□□ 2.2
TCF4-230ENST00000565908 C12orf42Q96LP6 360 aa28.82■■■□□ 2.2
TCF4-230ENST00000565908 M0R2C6 588 aa28.81■■■□□ 2.2
TCF4-230ENST00000565908 CDK8P49336 464 aa28.81■■■□□ 2.2
TCF4-230ENST00000565908 MLLT1Q03111 559 aaPredicted RBP28.81■■■□□ 2.2
TCF4-230ENST00000565908 B4GALNT3Q6L9W6 998 aa28.81■■■□□ 2.2
TCF4-230ENST00000565908 EVI5LQ96CN4 794 aa28.81■■■□□ 2.2
TCF4-230ENST00000565908 CCDC17Q96LX7 622 aa28.81■■■□□ 2.2
TCF4-230ENST00000565908 ZYXQ15942 572 aaKnown RBP28.8■■■□□ 2.2
TCF4-230ENST00000565908 SBK1Q52WX2 424 aa28.8■■■□□ 2.2
TCF4-230ENST00000565908 ACER1Q8TDN7 264 aa28.8■■■□□ 2.2
TCF4-230ENST00000565908 MYPNQ86TC9 1320 aa28.79■■■□□ 2.2
TCF4-230ENST00000565908 ZMYM1Q5SVZ6 1142 aa28.79■■■□□ 2.2
TCF4-230ENST00000565908 CHD1LQ86WJ1 897 aa28.79■■■□□ 2.2
TCF4-230ENST00000565908 ZSWIM8A7E2V4 1837 aa28.78■■■□□ 2.2
TCF4-230ENST00000565908 SMIM22K7EJ46 135 aa28.78■■■□□ 2.2
TCF4-230ENST00000565908 NUCB1Q02818 461 aa28.78■■■□□ 2.2
TCF4-230ENST00000565908 RAET1EQ8TD07 263 aa28.78■■■□□ 2.2
TCF4-230ENST00000565908 P2RX7Q99572 595 aaKnown RBP28.78■■■□□ 2.2
TCF4-230ENST00000565908 PATL2C9JE40 543 aaKnown RBP28.77■■■□□ 2.2
TCF4-230ENST00000565908 TNPO2O14787 897 aaKnown RBP28.77■■■□□ 2.2
TCF4-230ENST00000565908 APPP05067 770 aa28.77■■■□□ 2.2
TCF4-230ENST00000565908 AKR1B1P15121 316 aa28.77■■■□□ 2.2
TCF4-230ENST00000565908 HERVK_113P62684 666 aa28.77■■■□□ 2.2
TCF4-230ENST00000565908 GTF3C2Q8WUA4 911 aaPredicted RBP28.77■■■□□ 2.2
TCF4-230ENST00000565908 ZNF333Q96JL9 665 aa28.77■■■□□ 2.2
TCF4-230ENST00000565908 SEC62Q99442 399 aaKnown RBP28.77■■■□□ 2.2
TCF4-230ENST00000565908 MORF4L1Q9UBU8 362 aa28.77■■■□□ 2.2
TCF4-230ENST00000565908 BAZ2AQ9UIF9 1905 aaKnown RBP28.77■■■□□ 2.2
TCF4-230ENST00000565908 USP17L15C9J2P7 530 aa28.76■■■□□ 2.19
TCF4-230ENST00000565908 USP17L13C9JLJ4 530 aa28.76■■■□□ 2.19
TCF4-230ENST00000565908 USP17L11C9JVI0 530 aa28.76■■■□□ 2.19
TCF4-230ENST00000565908 USP17L18D6R9N7 530 aa28.76■■■□□ 2.19
TCF4-230ENST00000565908 USP17L22D6RA61 530 aa28.76■■■□□ 2.19
TCF4-230ENST00000565908 USP17L17D6RBQ6 530 aa28.76■■■□□ 2.19
TCF4-230ENST00000565908 USP17L19D6RCP7 530 aa28.76■■■□□ 2.19
TCF4-230ENST00000565908 USP17L20D6RJB6 530 aa28.76■■■□□ 2.19
TCF4-230ENST00000565908 TDO2P48775 406 aa28.76■■■□□ 2.19
TCF4-230ENST00000565908 PRKCZQ05513 592 aa28.76■■■□□ 2.19
TCF4-230ENST00000565908 USP17L24Q0WX57 530 aa28.76■■■□□ 2.19
TCF4-230ENST00000565908 NACAP1Q9BZK3 213 aa28.76■■■□□ 2.19
TCF4-230ENST00000565908 MINDY4BA8MYZ0 360 aa28.75■■■□□ 2.19
TCF4-230ENST00000565908 VCAM1P19320 739 aa28.75■■■□□ 2.19
TCF4-230ENST00000565908 TICAM2Q86XR7 235 aa28.75■■■□□ 2.19
TCF4-230ENST00000565908 EPB41L4AQ9HCS5 686 aaPredicted RBP28.75■■■□□ 2.19
TCF4-230ENST00000565908 ICA1Q05084 483 aa28.74■■■□□ 2.19
TCF4-230ENST00000565908 IFNL3Q8IZI9 196 aa28.74■■■□□ 2.19
TCF4-230ENST00000565908 SH3TC2Q8TF17 1288 aa28.74■■■□□ 2.19
TCF4-230ENST00000565908 COA7Q96BR5 231 aa28.74■■■□□ 2.19
TCF4-230ENST00000565908 ARHGEF10LQ9HCE6 1279 aa28.74■■■□□ 2.19
TCF4-230ENST00000565908 A0A1W2PRG0 241 aa28.73■■■□□ 2.19
TCF4-230ENST00000565908 SH2D4AQ9H788 454 aa28.73■■■□□ 2.19
TCF4-230ENST00000565908 ROBO3Q96MS0 1386 aa28.73■■■□□ 2.19
TCF4-230ENST00000565908 GRK4P32298 578 aa28.72■■■□□ 2.19
TCF4-230ENST00000565908 CATSPERGQ6ZRH7 1159 aa28.72■■■□□ 2.19
TCF4-230ENST00000565908 GPRC5AQ8NFJ5 357 aa28.72■■■□□ 2.19
TCF4-230ENST00000565908 TMEM106CQ9BVX2 250 aa28.72■■■□□ 2.19
TCF4-230ENST00000565908 MKNK2Q9HBH9 465 aa28.72■■■□□ 2.19
TCF4-230ENST00000565908 GABRQQ9UN88 632 aa28.72■■■□□ 2.19
TCF4-230ENST00000565908 FLT3LGP49771 235 aa28.71■■■□□ 2.19
TCF4-230ENST00000565908 IRX6P78412 446 aaPredicted RBP28.71■■■□□ 2.19
TCF4-230ENST00000565908 PLEKHM2Q8IWE5 1019 aa28.71■■■□□ 2.19
TCF4-230ENST00000565908 OSBPL3Q9H4L5 887 aa28.71■■■□□ 2.19
TCF4-230ENST00000565908 RPAP3Q9H6T3 665 aaPredicted RBP28.71■■■□□ 2.19
TCF4-230ENST00000565908 KANSL2Q9H9L4 492 aa28.71■■■□□ 2.19
TCF4-230ENST00000565908 ZNF287Q9HBT7 754 aa28.71■■■□□ 2.19
TCF4-230ENST00000565908 TRIM6-TRIM34B2RNG4 842 aa28.7■■■□□ 2.18
TCF4-230ENST00000565908 SIAH1Q8IUQ4 282 aa28.7■■■□□ 2.18
TCF4-230ENST00000565908 SLAIN1Q8ND83 568 aa28.7■■■□□ 2.18
TCF4-230ENST00000565908 NAPBQ9H115 298 aa28.7■■■□□ 2.18
TCF4-230ENST00000565908 TXNRD2Q9NNW7 524 aa28.7■■■□□ 2.18
TCF4-230ENST00000565908 HELLSQ9NRZ9 838 aa28.7■■■□□ 2.18
TCF4-230ENST00000565908 RBPJLQ9UBG7 517 aa28.7■■■□□ 2.18
TCF4-230ENST00000565908 TMX2Q9Y320 296 aa28.7■■■□□ 2.18
TCF4-230ENST00000565908 IRF5Q13568 498 aa28.69■■■□□ 2.18
TCF4-230ENST00000565908 CLEC10AQ8IUN9 316 aa28.69■■■□□ 2.18
TCF4-230ENST00000565908 LPAR1Q92633 364 aa28.69■■■□□ 2.18
TCF4-230ENST00000565908 CENPFP49454 3210 aa28.68■■■□□ 2.18
TCF4-230ENST00000565908 POTEFA5A3E0 1075 aa28.68■■■□□ 2.18
TCF4-230ENST00000565908 RASA1P20936 1047 aa28.68■■■□□ 2.18
TCF4-230ENST00000565908 ERVK-9P63128 1117 aa28.68■■■□□ 2.18
TCF4-230ENST00000565908 ERVK-24P63145 666 aa28.68■■■□□ 2.18
TCF4-230ENST00000565908 CCDC129Q6ZRS4 1044 aa28.68■■■□□ 2.18
TCF4-230ENST00000565908 STK11IPQ8N1F8 1099 aa28.68■■■□□ 2.18
TCF4-230ENST00000565908 PAGR1Q9BTK6 254 aa28.68■■■□□ 2.18
TCF4-230ENST00000565908 RABGAP1Q9Y3P9 1069 aa28.68■■■□□ 2.18
TCF4-230ENST00000565908 MGAMO43451 1857 aa28.68■■■□□ 2.18
TCF4-230ENST00000565908 LBX2Q6XYB7 198 aa28.67■■■□□ 2.18
TCF4-230ENST00000565908 RILPL2Q969X0 211 aa28.67■■■□□ 2.18
TCF4-230ENST00000565908 ADCY3O60266 1144 aa28.66■■■□□ 2.18
TCF4-230ENST00000565908 SLC3A2P08195 630 aaKnown RBP28.66■■■□□ 2.18
TCF4-230ENST00000565908 EEF2P13639 858 aaKnown RBP28.66■■■□□ 2.18
TCF4-230ENST00000565908 ATP2B2Q01814 1243 aa28.66■■■□□ 2.18
TCF4-230ENST00000565908 PXYLP1Q8TE99 480 aa28.66■■■□□ 2.18
TCF4-230ENST00000565908 VCPKMTQ9H867 229 aa28.66■■■□□ 2.18
TCF4-230ENST00000565908 BIN2Q9UBW5 565 aaPredicted RBP28.66■■■□□ 2.18
TCF4-230ENST00000565908 MYH8P13535 1937 aa28.66■■■□□ 2.18
TCF4-230ENST00000565908 PEX10O60683 326 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms