RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 AKR1B1P15121 316 aa22.34■■□□□ 1.17
CMTM3-210ENST00000565666 GUCY1A2P33402 732 aa22.34■■□□□ 1.17
CMTM3-210ENST00000565666 NMIQ13287 307 aaPredicted RBP22.34■■□□□ 1.17
CMTM3-210ENST00000565666 MCMDC2Q4G0Z9 681 aa22.34■■□□□ 1.17
CMTM3-210ENST00000565666 OTOP1Q7RTM1 612 aa22.34■■□□□ 1.17
CMTM3-210ENST00000565666 EFCC1Q9HA90 598 aa22.34■■□□□ 1.17
CMTM3-210ENST00000565666 ECM2O94769 699 aaPredicted RBP22.33■■□□□ 1.17
CMTM3-210ENST00000565666 SDSP20132 328 aa22.33■■□□□ 1.17
CMTM3-210ENST00000565666 USP14P54578 494 aa22.33■■□□□ 1.17
CMTM3-210ENST00000565666 MKNK2Q9HBH9 465 aa22.33■■□□□ 1.17
CMTM3-210ENST00000565666 ROBO3Q96MS0 1386 aa22.33■■□□□ 1.17
CMTM3-210ENST00000565666 IRX3P78415 501 aaPredicted RBP22.32■■□□□ 1.16
CMTM3-210ENST00000565666 LACTBP83111 547 aaPredicted RBP22.32■■□□□ 1.16
CMTM3-210ENST00000565666 FBXO46Q6PJ61 603 aaPredicted RBP22.32■■□□□ 1.16
CMTM3-210ENST00000565666 ACER1Q8TDN7 264 aa22.32■■□□□ 1.16
CMTM3-210ENST00000565666 KIAA1683Q9H0B3 1180 aa22.32■■□□□ 1.16
CMTM3-210ENST00000565666 ASCC2Q9H1I8 757 aaPredicted RBP22.32■■□□□ 1.16
CMTM3-210ENST00000565666 ZNF287Q9HBT7 754 aa22.32■■□□□ 1.16
CMTM3-210ENST00000565666 DIAPH3Q9NSV4 1193 aa22.32■■□□□ 1.16
CMTM3-210ENST00000565666 ZSWIM8A7E2V4 1837 aa22.31■■□□□ 1.16
CMTM3-210ENST00000565666 CCDC85CA6NKD9 419 aa22.31■■□□□ 1.16
CMTM3-210ENST00000565666 SLC3A2P08195 630 aaKnown RBP22.31■■□□□ 1.16
CMTM3-210ENST00000565666 TTC22Q5TAA0 569 aa22.31■■□□□ 1.16
CMTM3-210ENST00000565666 EMILIN3Q9NT22 766 aa22.31■■□□□ 1.16
CMTM3-210ENST00000565666 HIP1O00291 1037 aa22.3■■□□□ 1.16
CMTM3-210ENST00000565666 NEFLP07196 543 aa22.3■■□□□ 1.16
CMTM3-210ENST00000565666 BCRP11274 1271 aa22.3■■□□□ 1.16
CMTM3-210ENST00000565666 ICA1Q05084 483 aa22.3■■□□□ 1.16
CMTM3-210ENST00000565666 VPS53Q5VIR6 699 aa22.3■■□□□ 1.16
CMTM3-210ENST00000565666 C12orf42Q96LP6 360 aa22.3■■□□□ 1.16
CMTM3-210ENST00000565666 ARHGAP39Q9C0H5 1083 aa22.3■■□□□ 1.16
CMTM3-210ENST00000565666 ARHGEF10LQ9HCE6 1279 aa22.3■■□□□ 1.16
CMTM3-210ENST00000565666 CCDC171Q6TFL3 1326 aa22.3■■□□□ 1.16
CMTM3-210ENST00000565666 HOXA7P31268 230 aaPredicted RBP22.29■■□□□ 1.16
CMTM3-210ENST00000565666 MFAP1P55081 439 aaKnown RBP22.29■■□□□ 1.16
CMTM3-210ENST00000565666 PPARAQ07869 468 aa22.29■■□□□ 1.16
CMTM3-210ENST00000565666 CLEC10AQ8IUN9 316 aa22.29■■□□□ 1.16
CMTM3-210ENST00000565666 SH2D4AQ9H788 454 aa22.29■■□□□ 1.16
CMTM3-210ENST00000565666 HPS5Q9UPZ3 1129 aa22.29■■□□□ 1.16
CMTM3-210ENST00000565666 FOXP2O15409 715 aa22.28■■□□□ 1.16
CMTM3-210ENST00000565666 FMNL1O95466 1100 aaPredicted RBP22.28■■□□□ 1.16
CMTM3-210ENST00000565666 RASA1P20936 1047 aa22.28■■□□□ 1.16
CMTM3-210ENST00000565666 PSMC4P43686 418 aa22.28■■□□□ 1.16
CMTM3-210ENST00000565666 GCLCP48506 637 aaPredicted RBP22.28■■□□□ 1.16
CMTM3-210ENST00000565666 CAP1Q01518 475 aa22.28■■□□□ 1.16
CMTM3-210ENST00000565666 ATP2B2Q01814 1243 aa22.28■■□□□ 1.16
CMTM3-210ENST00000565666 PDE4BQ07343 736 aa22.28■■□□□ 1.16
CMTM3-210ENST00000565666 CWC27Q6UX04 472 aaKnown RBP22.28■■□□□ 1.16
CMTM3-210ENST00000565666 ZNF589Q86UQ0 364 aaPredicted RBP22.28■■□□□ 1.16
CMTM3-210ENST00000565666 ZNF444Q8N0Y2 327 aaPredicted RBP22.28■■□□□ 1.16
CMTM3-210ENST00000565666 ANKRD13CQ8N6S4 541 aa22.28■■□□□ 1.16
CMTM3-210ENST00000565666 PTPN22Q9Y2R2 807 aa22.28■■□□□ 1.16
CMTM3-210ENST00000565666 A0A1W2PRG0 241 aa22.27■■□□□ 1.16
CMTM3-210ENST00000565666 MGAMO43451 1857 aa22.27■■□□□ 1.16
CMTM3-210ENST00000565666 PRDM1O75626 825 aa22.27■■□□□ 1.16
CMTM3-210ENST00000565666 GSPT1P15170 499 aaKnown RBP22.27■■□□□ 1.16
CMTM3-210ENST00000565666 VCAM1P19320 739 aa22.27■■□□□ 1.16
CMTM3-210ENST00000565666 CENPQQ7L2Z9 268 aaPredicted RBP22.27■■□□□ 1.16
CMTM3-210ENST00000565666 KANSL2Q9H9L4 492 aa22.27■■□□□ 1.16
CMTM3-210ENST00000565666 USP17L15C9J2P7 530 aa22.26■■□□□ 1.15
CMTM3-210ENST00000565666 USP17L13C9JLJ4 530 aa22.26■■□□□ 1.15
CMTM3-210ENST00000565666 USP17L11C9JVI0 530 aa22.26■■□□□ 1.15
CMTM3-210ENST00000565666 USP17L18D6R9N7 530 aa22.26■■□□□ 1.15
CMTM3-210ENST00000565666 USP17L22D6RA61 530 aa22.26■■□□□ 1.15
CMTM3-210ENST00000565666 USP17L17D6RBQ6 530 aa22.26■■□□□ 1.15
CMTM3-210ENST00000565666 USP17L19D6RCP7 530 aa22.26■■□□□ 1.15
CMTM3-210ENST00000565666 USP17L20D6RJB6 530 aa22.26■■□□□ 1.15
CMTM3-210ENST00000565666 GNRH1P01148 92 aa22.26■■□□□ 1.15
CMTM3-210ENST00000565666 FCGRTP55899 365 aa22.26■■□□□ 1.15
CMTM3-210ENST00000565666 USP17L24Q0WX57 530 aa22.26■■□□□ 1.15
CMTM3-210ENST00000565666 FAM110CQ1W6H9 321 aa22.26■■□□□ 1.15
CMTM3-210ENST00000565666 P2RX7Q99572 595 aaKnown RBP22.26■■□□□ 1.15
CMTM3-210ENST00000565666 GREB1LQ9C091 1923 aaPredicted RBP22.25■■□□□ 1.15
CMTM3-210ENST00000565666 HSPD1P10809 573 aaKnown RBP22.25■■□□□ 1.15
CMTM3-210ENST00000565666 EEF2P13639 858 aaKnown RBP22.25■■□□□ 1.15
CMTM3-210ENST00000565666 HOXD10P28358 340 aa22.25■■□□□ 1.15
CMTM3-210ENST00000565666 HERVK_113P62684 666 aa22.25■■□□□ 1.15
CMTM3-210ENST00000565666 CTDSPL2Q05D32 466 aa22.25■■□□□ 1.15
CMTM3-210ENST00000565666 ALX1Q15699 326 aa22.25■■□□□ 1.15
CMTM3-210ENST00000565666 TRIM47Q96LD4 638 aa22.25■■□□□ 1.15
CMTM3-210ENST00000565666 RPAP3Q9H6T3 665 aaPredicted RBP22.25■■□□□ 1.15
CMTM3-210ENST00000565666 TMX2Q9Y320 296 aa22.25■■□□□ 1.15
CMTM3-210ENST00000565666 CENPBP07199 599 aaPredicted RBP22.24■■□□□ 1.15
CMTM3-210ENST00000565666 CTGFP29279 349 aa22.24■■□□□ 1.15
CMTM3-210ENST00000565666 FGAP02671 866 aa22.23■■□□□ 1.15
CMTM3-210ENST00000565666 TSPY3P0CV98 308 aa22.23■■□□□ 1.15
CMTM3-210ENST00000565666 TSPY8P0CW00 308 aa22.23■■□□□ 1.15
CMTM3-210ENST00000565666 PRMT2P55345 433 aa22.23■■□□□ 1.15
CMTM3-210ENST00000565666 CATSPERGQ6ZRH7 1159 aa22.23■■□□□ 1.15
CMTM3-210ENST00000565666 SIAH1Q8IUQ4 282 aa22.23■■□□□ 1.15
CMTM3-210ENST00000565666 GTF3C2Q8WUA4 911 aaPredicted RBP22.23■■□□□ 1.15
CMTM3-210ENST00000565666 CCDC136Q96JN2 1154 aa22.23■■□□□ 1.15
CMTM3-210ENST00000565666 VCPKMTQ9H867 229 aa22.23■■□□□ 1.15
CMTM3-210ENST00000565666 PTCH2Q9Y6C5 1203 aa22.23■■□□□ 1.15
CMTM3-210ENST00000565666 RAD21O60216 631 aa22.22■■□□□ 1.15
CMTM3-210ENST00000565666 LPAR1Q92633 364 aa22.22■■□□□ 1.15
CMTM3-210ENST00000565666 PAGR1Q9BTK6 254 aa22.22■■□□□ 1.15
CMTM3-210ENST00000565666 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.22■■□□□ 1.15
CMTM3-210ENST00000565666 TANGO6Q9C0B7 1094 aa22.22■■□□□ 1.15
CMTM3-210ENST00000565666 GOPCQ9HD26 462 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms