RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 HOXA7P31268 230 aaPredicted RBP13.88□□□□□ -0.19
CAPN3-215ENST00000565559 ERVK-9P63128 1117 aa13.88□□□□□ -0.19
CAPN3-215ENST00000565559 ERVK-24P63145 666 aa13.88□□□□□ -0.19
CAPN3-215ENST00000565559 ATP2B2Q01814 1243 aa13.88□□□□□ -0.19
CAPN3-215ENST00000565559 GJC2Q5T442 439 aaPredicted RBP13.88□□□□□ -0.19
CAPN3-215ENST00000565559 POTEEQ6S8J3 1075 aa13.88□□□□□ -0.19
CAPN3-215ENST00000565559 SLF2Q8IX21 1173 aa13.88□□□□□ -0.19
CAPN3-215ENST00000565559 PHIPQ8WWQ0 1821 aa13.87□□□□□ -0.19
CAPN3-215ENST00000565559 RFX7Q2KHR2 1363 aa13.87□□□□□ -0.19
CAPN3-215ENST00000565559 TRIM43BA6NCK2 446 aa13.87□□□□□ -0.19
CAPN3-215ENST00000565559 ALDH1L1O75891 902 aa13.87□□□□□ -0.19
CAPN3-215ENST00000565559 CCNA1P78396 465 aa13.87□□□□□ -0.19
CAPN3-215ENST00000565559 MTMR2Q13614 643 aa13.87□□□□□ -0.19
CAPN3-215ENST00000565559 SNX17Q15036 470 aa13.87□□□□□ -0.19
CAPN3-215ENST00000565559 DIEXFQ68CQ4 756 aaKnown RBP13.87□□□□□ -0.19
CAPN3-215ENST00000565559 PLPP6Q8IY26 295 aa13.87□□□□□ -0.19
CAPN3-215ENST00000565559 ZGPATQ8N5A5 531 aaKnown RBP13.87□□□□□ -0.19
CAPN3-215ENST00000565559 TRIM43Q96BQ3 446 aaPredicted RBP13.87□□□□□ -0.19
CAPN3-215ENST00000565559 SUCLG2Q96I99 432 aa13.87□□□□□ -0.19
CAPN3-215ENST00000565559 PAGR1Q9BTK6 254 aa13.87□□□□□ -0.19
CAPN3-215ENST00000565559 PORCNQ9H237 461 aa13.87□□□□□ -0.19
CAPN3-215ENST00000565559 TACC3Q9Y6A5 838 aa13.87□□□□□ -0.19
CAPN3-215ENST00000565559 SALL1Q9NSC2 1324 aa13.87□□□□□ -0.19
CAPN3-215ENST00000565559 PEX10O60683 326 aa13.86□□□□□ -0.19
CAPN3-215ENST00000565559 FOXK1P85037 733 aa13.86□□□□□ -0.19
CAPN3-215ENST00000565559 FPGSQ05932 587 aa13.86□□□□□ -0.19
CAPN3-215ENST00000565559 CCDC85BQ15834 202 aaPredicted RBP13.86□□□□□ -0.19
CAPN3-215ENST00000565559 WDR78Q5VTH9 848 aa13.86□□□□□ -0.19
CAPN3-215ENST00000565559 SH3RF1Q7Z6J0 888 aa13.86□□□□□ -0.19
CAPN3-215ENST00000565559 DZIP1Q86YF9 867 aaKnown RBP13.86□□□□□ -0.19
CAPN3-215ENST00000565559 LPIN2Q92539 896 aa13.86□□□□□ -0.19
CAPN3-215ENST00000565559 LRFN3Q9BTN0 628 aa13.86□□□□□ -0.19
CAPN3-215ENST00000565559 DDX4Q9NQI0 724 aaKnown RBP13.86□□□□□ -0.19
CAPN3-215ENST00000565559 RBPJLQ9UBG7 517 aa13.86□□□□□ -0.19
CAPN3-215ENST00000565559 GAKO14976 1311 aa13.86□□□□□ -0.19
CAPN3-215ENST00000565559 FAM196BA6NMK8 535 aa13.85□□□□□ -0.19
CAPN3-215ENST00000565559 CLTBP09497 229 aa13.85□□□□□ -0.19
CAPN3-215ENST00000565559 RAG1P15918 1043 aa13.85□□□□□ -0.19
CAPN3-215ENST00000565559 FGFR2P21802 821 aa13.85□□□□□ -0.19
CAPN3-215ENST00000565559 CAP2P40123 477 aa13.85□□□□□ -0.19
CAPN3-215ENST00000565559 BACE1P56817 501 aa13.85□□□□□ -0.19
CAPN3-215ENST00000565559 AAK1Q2M2I8 961 aa13.85□□□□□ -0.19
CAPN3-215ENST00000565559 Q3C1V9 767 aa13.85□□□□□ -0.19
CAPN3-215ENST00000565559 TMEM31Q5JXX7 168 aa13.85□□□□□ -0.19
CAPN3-215ENST00000565559 C1orf53Q5VUE5 145 aa13.85□□□□□ -0.19
CAPN3-215ENST00000565559 SNX27Q96L92 541 aa13.85□□□□□ -0.19
CAPN3-215ENST00000565559 SRCIN1Q9C0H9 1055 aa13.85□□□□□ -0.19
CAPN3-215ENST00000565559 PRDM12Q9H4Q4 367 aa13.85□□□□□ -0.19
CAPN3-215ENST00000565559 DENND2AQ9ULE3 1009 aa13.85□□□□□ -0.19
CAPN3-215ENST00000565559 IVNS1ABPQ9Y6Y0 642 aa13.85□□□□□ -0.19
CAPN3-215ENST00000565559 SLC15A5A6NIM6 579 aa13.84□□□□□ -0.19
CAPN3-215ENST00000565559 C19orf81C9J6K1 198 aa13.84□□□□□ -0.19
CAPN3-215ENST00000565559 CCER2I3L3R5 266 aa13.84□□□□□ -0.19
CAPN3-215ENST00000565559 SEMA3EO15041 775 aa13.84□□□□□ -0.19
CAPN3-215ENST00000565559 IGFBP4P22692 258 aa13.84□□□□□ -0.19
CAPN3-215ENST00000565559 BTDP43251 543 aa13.84□□□□□ -0.19
CAPN3-215ENST00000565559 SLC4A10Q6U841 1118 aa13.84□□□□□ -0.19
CAPN3-215ENST00000565559 CCDC129Q6ZRS4 1044 aa13.84□□□□□ -0.19
CAPN3-215ENST00000565559 ALYREFQ86V81 257 aaKnown RBP13.84□□□□□ -0.19
CAPN3-215ENST00000565559 NECAB3Q96P71 396 aaPredicted RBP13.84□□□□□ -0.19
CAPN3-215ENST00000565559 WDR18Q9BV38 432 aa13.84□□□□□ -0.19
CAPN3-215ENST00000565559 BICC1Q9H694 974 aaKnown RBP13.84□□□□□ -0.19
CAPN3-215ENST00000565559 FLRT1Q9NZU1 646 aa13.84□□□□□ -0.19
CAPN3-215ENST00000565559 CXXC1Q9P0U4 656 aaPredicted RBP13.84□□□□□ -0.19
CAPN3-215ENST00000565559 ST18O60284 1047 aa13.83□□□□□ -0.2
CAPN3-215ENST00000565559 CYP2C19P33261 490 aa13.83□□□□□ -0.2
CAPN3-215ENST00000565559 ADCYAP1R1P41586 468 aa13.83□□□□□ -0.2
CAPN3-215ENST00000565559 EPHB4P54760 987 aa13.83□□□□□ -0.2
CAPN3-215ENST00000565559 TLE2Q04725 743 aa13.83□□□□□ -0.2
CAPN3-215ENST00000565559 RABL6Q3YEC7 729 aaPredicted RBP13.83□□□□□ -0.2
CAPN3-215ENST00000565559 CCDC174Q6PII3 467 aa13.83□□□□□ -0.2
CAPN3-215ENST00000565559 FERMT2Q96AC1 680 aa13.83□□□□□ -0.2
CAPN3-215ENST00000565559 KAZALD1Q96I82 304 aa13.83□□□□□ -0.2
CAPN3-215ENST00000565559 FRMPD3Q5JV73 1810 aa13.83□□□□□ -0.2
CAPN3-215ENST00000565559 ASNSP08243 561 aa13.82□□□□□ -0.2
CAPN3-215ENST00000565559 HOXC6P09630 235 aa13.82□□□□□ -0.2
CAPN3-215ENST00000565559 CYBAP13498 195 aa13.82□□□□□ -0.2
CAPN3-215ENST00000565559 PPP1R15BQ5SWA1 713 aa13.82□□□□□ -0.2
CAPN3-215ENST00000565559 LCE2DQ5TA82 110 aaPredicted RBP13.82□□□□□ -0.2
CAPN3-215ENST00000565559 HERC5Q9UII4 1024 aaKnown RBP13.82□□□□□ -0.2
CAPN3-215ENST00000565559 RABGAP1Q9Y3P9 1069 aa13.82□□□□□ -0.2
CAPN3-215ENST00000565559 NDUFB9Q9Y6M9 179 aa13.82□□□□□ -0.2
CAPN3-215ENST00000565559 USP17L10C9JJH3 530 aa13.81□□□□□ -0.2
CAPN3-215ENST00000565559 KIAA0355O15063 1070 aa13.81□□□□□ -0.2
CAPN3-215ENST00000565559 NBPF7P0C2Y1 421 aaPredicted RBP13.81□□□□□ -0.2
CAPN3-215ENST00000565559 BMP1P13497 986 aa13.81□□□□□ -0.2
CAPN3-215ENST00000565559 PTPREP23469 700 aa13.81□□□□□ -0.2
CAPN3-215ENST00000565559 ITGB8P26012 769 aa13.81□□□□□ -0.2
CAPN3-215ENST00000565559 SPTY2D1Q68D10 685 aaPredicted RBP13.81□□□□□ -0.2
CAPN3-215ENST00000565559 TRPV1Q8NER1 839 aa13.81□□□□□ -0.2
CAPN3-215ENST00000565559 KLHDC4Q8TBB5 520 aa13.81□□□□□ -0.2
CAPN3-215ENST00000565559 DDX27Q96GQ7 796 aaKnown RBP13.81□□□□□ -0.2
CAPN3-215ENST00000565559 TMEM39AQ9NV64 488 aa13.81□□□□□ -0.2
CAPN3-215ENST00000565559 SEPT4O43236 478 aa13.8□□□□□ -0.2
CAPN3-215ENST00000565559 ZNF710Q8N1W2 664 aa13.8□□□□□ -0.2
CAPN3-215ENST00000565559 PBX4Q9BYU1 374 aa13.8□□□□□ -0.2
CAPN3-215ENST00000565559 EPHX3Q9H6B9 360 aa13.8□□□□□ -0.2
CAPN3-215ENST00000565559 ABCF2Q9UG63 623 aa13.8□□□□□ -0.2
CAPN3-215ENST00000565559 MSRAQ9UJ68 235 aa13.8□□□□□ -0.2
CAPN3-215ENST00000565559 MROH7-TTC4A0A0A0MT08 1334 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms