RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 NOL8Q76FK4 1167 aaKnown RBP13.06□□□□□ -0.32
SF3B3-205ENST00000564899 IFNL1Q8IU54 200 aa13.06□□□□□ -0.32
SF3B3-205ENST00000564899 CD99L2Q8TCZ2 262 aa13.06□□□□□ -0.32
SF3B3-205ENST00000564899 FAM151AQ8WW52 585 aa13.06□□□□□ -0.32
SF3B3-205ENST00000564899 IPO9Q96P70 1041 aaKnown RBP13.06□□□□□ -0.32
SF3B3-205ENST00000564899 LRRC2Q9BYS8 371 aa13.06□□□□□ -0.32
SF3B3-205ENST00000564899 ZNF287Q9HBT7 754 aa13.06□□□□□ -0.32
SF3B3-205ENST00000564899 ANGEL1Q9UNK9 670 aaKnown RBP13.06□□□□□ -0.32
SF3B3-205ENST00000564899 WDR19Q8NEZ3 1342 aa13.06□□□□□ -0.32
SF3B3-205ENST00000564899 ATRNL1Q5VV63 1379 aa13.06□□□□□ -0.32
SF3B3-205ENST00000564899 CDK5RAP2Q96SN8 1893 aa13.06□□□□□ -0.32
SF3B3-205ENST00000564899 ZSWIM8A7E2V4 1837 aa13.05□□□□□ -0.32
SF3B3-205ENST00000564899 ECM29Q5VYK3 1845 aa13.05□□□□□ -0.32
SF3B3-205ENST00000564899 DDTLA6NHG4 134 aaPredicted RBP13.05□□□□□ -0.32
SF3B3-205ENST00000564899 K7ELQ4 463 aaPredicted RBP13.05□□□□□ -0.32
SF3B3-205ENST00000564899 RANBP6O60518 1105 aaKnown RBP13.05□□□□□ -0.32
SF3B3-205ENST00000564899 TNNI2P48788 182 aa13.05□□□□□ -0.32
SF3B3-205ENST00000564899 ANTXR2P58335 489 aa13.05□□□□□ -0.32
SF3B3-205ENST00000564899 TNFAIP1Q13829 316 aa13.05□□□□□ -0.32
SF3B3-205ENST00000564899 ANKRD1Q15327 319 aa13.05□□□□□ -0.32
SF3B3-205ENST00000564899 CYB5R4Q7L1T6 521 aa13.05□□□□□ -0.32
SF3B3-205ENST00000564899 SH3BP5LQ7L8J4 393 aa13.05□□□□□ -0.32
SF3B3-205ENST00000564899 CHST3Q7LGC8 479 aa13.05□□□□□ -0.32
SF3B3-205ENST00000564899 FAM83AQ86UY5 434 aa13.05□□□□□ -0.32
SF3B3-205ENST00000564899 SLC44A5Q8NCS7 719 aa13.05□□□□□ -0.32
SF3B3-205ENST00000564899 NKX2-3Q8TAU0 364 aa13.05□□□□□ -0.32
SF3B3-205ENST00000564899 EHD4Q9H223 541 aa13.05□□□□□ -0.32
SF3B3-205ENST00000564899 ALDH8A1Q9H2A2 487 aaPredicted RBP13.05□□□□□ -0.32
SF3B3-205ENST00000564899 MKNK2Q9HBH9 465 aa13.05□□□□□ -0.32
SF3B3-205ENST00000564899 DAXXQ9UER7 740 aaPredicted RBP13.05□□□□□ -0.32
SF3B3-205ENST00000564899 SERPINB13Q9UIV8 391 aa13.05□□□□□ -0.32
SF3B3-205ENST00000564899 CDK8P49336 464 aa13.04□□□□□ -0.32
SF3B3-205ENST00000564899 NT5C2P49902 561 aa13.04□□□□□ -0.32
SF3B3-205ENST00000564899 GABPAQ06546 454 aa13.04□□□□□ -0.32
SF3B3-205ENST00000564899 CRACR2BQ8N4Y2 399 aaPredicted RBP13.04□□□□□ -0.32
SF3B3-205ENST00000564899 TRIM34Q9BYJ4 488 aa13.04□□□□□ -0.32
SF3B3-205ENST00000564899 ZSWIM5Q9P217 1185 aa13.04□□□□□ -0.32
SF3B3-205ENST00000564899 PI4KBQ9UBF8 816 aa13.04□□□□□ -0.32
SF3B3-205ENST00000564899 SWAP70Q9UH65 585 aa13.04□□□□□ -0.32
SF3B3-205ENST00000564899 COLQQ9Y215 455 aaPredicted RBP13.04□□□□□ -0.32
SF3B3-205ENST00000564899 PTPN22Q9Y2R2 807 aa13.04□□□□□ -0.32
SF3B3-205ENST00000564899 OTOFQ9HC10 1997 aa13.03□□□□□ -0.32
SF3B3-205ENST00000564899 TSPY2A6NKD2 308 aa13.03□□□□□ -0.32
SF3B3-205ENST00000564899 RASA1P20936 1047 aa13.03□□□□□ -0.32
SF3B3-205ENST00000564899 CRHR2Q13324 411 aa13.03□□□□□ -0.32
SF3B3-205ENST00000564899 TOB2Q14106 344 aaPredicted RBP13.03□□□□□ -0.32
SF3B3-205ENST00000564899 RASA3Q14644 834 aa13.03□□□□□ -0.32
SF3B3-205ENST00000564899 SART3Q15020 963 aaKnown RBP13.03□□□□□ -0.32
SF3B3-205ENST00000564899 APOBEC3FQ8IUX4 373 aaKnown RBP13.03□□□□□ -0.32
SF3B3-205ENST00000564899 ZNF444Q8N0Y2 327 aaPredicted RBP13.03□□□□□ -0.32
SF3B3-205ENST00000564899 BRF1Q92994 677 aa13.03□□□□□ -0.32
SF3B3-205ENST00000564899 WNK4Q96J92 1243 aa13.03□□□□□ -0.32
SF3B3-205ENST00000564899 TMEM87BQ96K49 555 aa13.03□□□□□ -0.32
SF3B3-205ENST00000564899 PTPN18Q99952 460 aa13.03□□□□□ -0.32
SF3B3-205ENST00000564899 UBAC1Q9BSL1 405 aa13.03□□□□□ -0.32
SF3B3-205ENST00000564899 TMEM39BQ9GZU3 492 aa13.03□□□□□ -0.32
SF3B3-205ENST00000564899 TAOK2Q9UL54 1235 aa13.03□□□□□ -0.32
SF3B3-205ENST00000564899 LIMCH1Q9UPQ0 1083 aa13.03□□□□□ -0.32
SF3B3-205ENST00000564899 MYH1P12882 1939 aa13.02□□□□□ -0.32
SF3B3-205ENST00000564899 SH2B2O14492 632 aaPredicted RBP13.02□□□□□ -0.33
SF3B3-205ENST00000564899 IFIT3O14879 490 aaKnown RBP13.02□□□□□ -0.33
SF3B3-205ENST00000564899 TSPY3P0CV98 308 aa13.02□□□□□ -0.33
SF3B3-205ENST00000564899 TSPY8P0CW00 308 aa13.02□□□□□ -0.33
SF3B3-205ENST00000564899 NF2P35240 595 aa13.02□□□□□ -0.33
SF3B3-205ENST00000564899 SLC4A3P48751 1232 aa13.02□□□□□ -0.33
SF3B3-205ENST00000564899 TMEM67Q5HYA8 995 aa13.02□□□□□ -0.33
SF3B3-205ENST00000564899 FAM47AQ5JRC9 791 aa13.02□□□□□ -0.33
SF3B3-205ENST00000564899 ARMC9Q7Z3E5 817 aa13.02□□□□□ -0.33
SF3B3-205ENST00000564899 IQCA1Q86XH1 822 aa13.02□□□□□ -0.33
SF3B3-205ENST00000564899 FOXP4Q8IVH2 680 aaPredicted RBP13.02□□□□□ -0.33
SF3B3-205ENST00000564899 FBXL16Q8N461 479 aa13.02□□□□□ -0.33
SF3B3-205ENST00000564899 TMX3Q96JJ7 454 aa13.02□□□□□ -0.33
SF3B3-205ENST00000564899 ZKSCAN3Q9BRR0 538 aa13.02□□□□□ -0.33
SF3B3-205ENST00000564899 LARP6Q9BRS8 491 aaKnown RBP13.02□□□□□ -0.33
SF3B3-205ENST00000564899 MTA3Q9BTC8 594 aa13.02□□□□□ -0.33
SF3B3-205ENST00000564899 AGXT2Q9BYV1 514 aa13.02□□□□□ -0.33
SF3B3-205ENST00000564899 GPHNQ9NQX3 736 aaPredicted RBP13.02□□□□□ -0.33
SF3B3-205ENST00000564899 ERICH2A1L162 156 aa13.01□□□□□ -0.33
SF3B3-205ENST00000564899 MYCP01106 439 aaPredicted RBP13.01□□□□□ -0.33
SF3B3-205ENST00000564899 SHMT1P34896 483 aa13.01□□□□□ -0.33
SF3B3-205ENST00000564899 TFAP4Q01664 338 aa13.01□□□□□ -0.33
SF3B3-205ENST00000564899 METTL16Q86W50 562 aaKnown RBP13.01□□□□□ -0.33
SF3B3-205ENST00000564899 CDAN1Q8IWY9 1227 aa13.01□□□□□ -0.33
SF3B3-205ENST00000564899 ARMC5Q96C12 935 aa13.01□□□□□ -0.33
SF3B3-205ENST00000564899 ZSCAN31Q96LW9 406 aaPredicted RBP13.01□□□□□ -0.33
SF3B3-205ENST00000564899 ZSCAN10Q96SZ4 725 aaPredicted RBP13.01□□□□□ -0.33
SF3B3-205ENST00000564899 DEFB129Q9H1M3 183 aa13.01□□□□□ -0.33
SF3B3-205ENST00000564899 DNAJC18Q9H819 358 aa13.01□□□□□ -0.33
SF3B3-205ENST00000564899 HERC5Q9UII4 1024 aaKnown RBP13.01□□□□□ -0.33
SF3B3-205ENST00000564899 TPCN1Q9ULQ1 816 aa13.01□□□□□ -0.33
SF3B3-205ENST00000564899 TNKSO95271 1327 aa13.01□□□□□ -0.33
SF3B3-205ENST00000564899 MANSC4A6NHS7 340 aaPredicted RBP13□□□□□ -0.33
SF3B3-205ENST00000564899 FAM196BA6NMK8 535 aa13□□□□□ -0.33
SF3B3-205ENST00000564899 SLURP2P0DP57 97 aa13□□□□□ -0.33
SF3B3-205ENST00000564899 APOBRQ0VD83 1088 aa13□□□□□ -0.33
SF3B3-205ENST00000564899 WTAPQ15007 396 aa13□□□□□ -0.33
SF3B3-205ENST00000564899 NFXL1Q6ZNB6 911 aa13□□□□□ -0.33
SF3B3-205ENST00000564899 IGDCC4Q8TDY8 1250 aa13□□□□□ -0.33
SF3B3-205ENST00000564899 CNKSR2Q8WXI2 1034 aa13□□□□□ -0.33
SF3B3-205ENST00000564899 SLC10A4Q96EP9 437 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms