RNA–Protein interactions for RNA: ENST00000564865.5

PKD1-228, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 480 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-228ENST00000564865 EMILIN3Q9NT22 766 aa16.41■□□□□ 0.22
PKD1-228ENST00000564865 PNMA3Q9UL41 463 aa16.41■□□□□ 0.22
PKD1-228ENST00000564865 CAP1Q01518 475 aa16.4■□□□□ 0.22
PKD1-228ENST00000564865 PKN2Q16513 984 aaKnown RBP16.4■□□□□ 0.22
PKD1-228ENST00000564865 VPS53Q5VIR6 699 aa16.4■□□□□ 0.22
PKD1-228ENST00000564865 OTOP1Q7RTM1 612 aa16.4■□□□□ 0.22
PKD1-228ENST00000564865 TICAM2Q86XR7 235 aa16.4■□□□□ 0.22
PKD1-228ENST00000564865 CCDC17Q96LX7 622 aa16.4■□□□□ 0.22
PKD1-228ENST00000564865 ADGRA2Q96PE1 1338 aa16.4■□□□□ 0.22
PKD1-228ENST00000564865 CCDC85CA6NKD9 419 aa16.39■□□□□ 0.21
PKD1-228ENST00000564865 USP14P54578 494 aa16.39■□□□□ 0.21
PKD1-228ENST00000564865 LACTBP83111 547 aaPredicted RBP16.39■□□□□ 0.21
PKD1-228ENST00000564865 ARHGEF6Q15052 776 aa16.39■□□□□ 0.21
PKD1-228ENST00000564865 TTC22Q5TAA0 569 aa16.39■□□□□ 0.21
PKD1-228ENST00000564865 ARHGAP39Q9C0H5 1083 aa16.39■□□□□ 0.21
PKD1-228ENST00000564865 PTPRFP10586 1907 aa16.39■□□□□ 0.21
PKD1-228ENST00000564865 PRDM1O75626 825 aa16.38■□□□□ 0.21
PKD1-228ENST00000564865 BCRP11274 1271 aa16.38■□□□□ 0.21
PKD1-228ENST00000564865 IRX3P78415 501 aaPredicted RBP16.38■□□□□ 0.21
PKD1-228ENST00000564865 ATP2B2Q01814 1243 aa16.38■□□□□ 0.21
PKD1-228ENST00000564865 FBXO46Q6PJ61 603 aaPredicted RBP16.38■□□□□ 0.21
PKD1-228ENST00000564865 CWC27Q6UX04 472 aaKnown RBP16.38■□□□□ 0.21
PKD1-228ENST00000564865 ZNF589Q86UQ0 364 aaPredicted RBP16.38■□□□□ 0.21
PKD1-228ENST00000564865 CLEC10AQ8IUN9 316 aa16.38■□□□□ 0.21
PKD1-228ENST00000564865 ASCC2Q9H1I8 757 aaPredicted RBP16.38■□□□□ 0.21
PKD1-228ENST00000564865 DIAPH3Q9NSV4 1193 aa16.38■□□□□ 0.21
PKD1-228ENST00000564865 LOC285556D6RIA3 1793 aa16.37■□□□□ 0.21
PKD1-228ENST00000564865 A0A1W2PRG0 241 aa16.37■□□□□ 0.21
PKD1-228ENST00000564865 FOXP2O15409 715 aa16.37■□□□□ 0.21
PKD1-228ENST00000564865 SLC3A2P08195 630 aaKnown RBP16.37■□□□□ 0.21
PKD1-228ENST00000564865 GSPT1P15170 499 aaKnown RBP16.37■□□□□ 0.21
PKD1-228ENST00000564865 RASA1P20936 1047 aa16.37■□□□□ 0.21
PKD1-228ENST00000564865 HOXA7P31268 230 aaPredicted RBP16.37■□□□□ 0.21
PKD1-228ENST00000564865 PSMC4P43686 418 aa16.37■□□□□ 0.21
PKD1-228ENST00000564865 ICA1Q05084 483 aa16.37■□□□□ 0.21
PKD1-228ENST00000564865 PPARAQ07869 468 aa16.37■□□□□ 0.21
PKD1-228ENST00000564865 ZNF444Q8N0Y2 327 aaPredicted RBP16.37■□□□□ 0.21
PKD1-228ENST00000564865 ANKRD13CQ8N6S4 541 aa16.37■□□□□ 0.21
PKD1-228ENST00000564865 P2RX7Q99572 595 aaKnown RBP16.37■□□□□ 0.21
PKD1-228ENST00000564865 KIAA1683Q9H0B3 1180 aa16.37■□□□□ 0.21
PKD1-228ENST00000564865 ARHGEF10LQ9HCE6 1279 aa16.37■□□□□ 0.21
PKD1-228ENST00000564865 HPS5Q9UPZ3 1129 aa16.37■□□□□ 0.21
PKD1-228ENST00000564865 ROBO3Q96MS0 1386 aa16.37■□□□□ 0.21
PKD1-228ENST00000564865 HIP1O00291 1037 aa16.36■□□□□ 0.21
PKD1-228ENST00000564865 FMNL1O95466 1100 aaPredicted RBP16.36■□□□□ 0.21
PKD1-228ENST00000564865 NEFLP07196 543 aa16.36■□□□□ 0.21
PKD1-228ENST00000564865 HSPD1P10809 573 aaKnown RBP16.36■□□□□ 0.21
PKD1-228ENST00000564865 CTDSPL2Q05D32 466 aa16.36■□□□□ 0.21
PKD1-228ENST00000564865 SIAH1Q8IUQ4 282 aa16.36■□□□□ 0.21
PKD1-228ENST00000564865 C12orf42Q96LP6 360 aa16.36■□□□□ 0.21
PKD1-228ENST00000564865 ZNF287Q9HBT7 754 aa16.36■□□□□ 0.21
PKD1-228ENST00000564865 PTPN22Q9Y2R2 807 aa16.36■□□□□ 0.21
PKD1-228ENST00000564865 CCDC171Q6TFL3 1326 aa16.36■□□□□ 0.21
PKD1-228ENST00000564865 USP17L15C9J2P7 530 aa16.35■□□□□ 0.21
PKD1-228ENST00000564865 USP17L13C9JLJ4 530 aa16.35■□□□□ 0.21
PKD1-228ENST00000564865 USP17L11C9JVI0 530 aa16.35■□□□□ 0.21
PKD1-228ENST00000564865 USP17L18D6R9N7 530 aa16.35■□□□□ 0.21
PKD1-228ENST00000564865 USP17L22D6RA61 530 aa16.35■□□□□ 0.21
PKD1-228ENST00000564865 USP17L17D6RBQ6 530 aa16.35■□□□□ 0.21
PKD1-228ENST00000564865 USP17L19D6RCP7 530 aa16.35■□□□□ 0.21
PKD1-228ENST00000564865 USP17L20D6RJB6 530 aa16.35■□□□□ 0.21
PKD1-228ENST00000564865 EEF2P13639 858 aaKnown RBP16.35■□□□□ 0.21
PKD1-228ENST00000564865 CTGFP29279 349 aa16.35■□□□□ 0.21
PKD1-228ENST00000564865 GCLCP48506 637 aaPredicted RBP16.35■□□□□ 0.21
PKD1-228ENST00000564865 MFAP1P55081 439 aaKnown RBP16.35■□□□□ 0.21
PKD1-228ENST00000564865 PDE4BQ07343 736 aa16.35■□□□□ 0.21
PKD1-228ENST00000564865 USP17L24Q0WX57 530 aa16.35■□□□□ 0.21
PKD1-228ENST00000564865 CENPQQ7L2Z9 268 aaPredicted RBP16.35■□□□□ 0.21
PKD1-228ENST00000564865 KANSL2Q9H9L4 492 aa16.35■□□□□ 0.21
PKD1-228ENST00000564865 MYH8P13535 1937 aa16.35■□□□□ 0.21
PKD1-228ENST00000564865 FGAP02671 866 aa16.34■□□□□ 0.21
PKD1-228ENST00000564865 VCAM1P19320 739 aa16.34■□□□□ 0.21
PKD1-228ENST00000564865 ALX1Q15699 326 aa16.34■□□□□ 0.21
PKD1-228ENST00000564865 CCDC136Q96JN2 1154 aa16.34■□□□□ 0.21
PKD1-228ENST00000564865 TRIM47Q96LD4 638 aa16.34■□□□□ 0.21
PKD1-228ENST00000564865 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.34■□□□□ 0.21
PKD1-228ENST00000564865 RPAP3Q9H6T3 665 aaPredicted RBP16.34■□□□□ 0.21
PKD1-228ENST00000564865 SH2D4AQ9H788 454 aa16.34■□□□□ 0.21
PKD1-228ENST00000564865 INCENPQ9NQS7 918 aa16.34■□□□□ 0.21
PKD1-228ENST00000564865 TMX2Q9Y320 296 aa16.34■□□□□ 0.21
PKD1-228ENST00000564865 RAD21O60216 631 aa16.33■□□□□ 0.2
PKD1-228ENST00000564865 PEX10O60683 326 aa16.33■□□□□ 0.2
PKD1-228ENST00000564865 CENPBP07199 599 aaPredicted RBP16.33■□□□□ 0.2
PKD1-228ENST00000564865 FCGRTP55899 365 aa16.33■□□□□ 0.2
PKD1-228ENST00000564865 HERVK_113P62684 666 aa16.33■□□□□ 0.2
PKD1-228ENST00000564865 FAM47AQ5JRC9 791 aa16.33■□□□□ 0.2
PKD1-228ENST00000564865 CATSPERGQ6ZRH7 1159 aa16.33■□□□□ 0.2
PKD1-228ENST00000564865 ZSWIM8A7E2V4 1837 aa16.32■□□□□ 0.2
PKD1-228ENST00000564865 GNRH1P01148 92 aa16.32■□□□□ 0.2
PKD1-228ENST00000564865 TSPY3P0CV98 308 aa16.32■□□□□ 0.2
PKD1-228ENST00000564865 TSPY8P0CW00 308 aa16.32■□□□□ 0.2
PKD1-228ENST00000564865 HOXD10P28358 340 aa16.32■□□□□ 0.2
PKD1-228ENST00000564865 TFAP4Q01664 338 aa16.32■□□□□ 0.2
PKD1-228ENST00000564865 FAM110CQ1W6H9 321 aa16.32■□□□□ 0.2
PKD1-228ENST00000564865 KIAA1755Q5JYT7 1200 aa16.32■□□□□ 0.2
PKD1-228ENST00000564865 SKAP1Q86WV1 359 aa16.32■□□□□ 0.2
PKD1-228ENST00000564865 SPICE1Q8N0Z3 855 aa16.32■□□□□ 0.2
PKD1-228ENST00000564865 PAGR1Q9BTK6 254 aa16.32■□□□□ 0.2
PKD1-228ENST00000564865 VCPKMTQ9H867 229 aa16.32■□□□□ 0.2
PKD1-228ENST00000564865 PTCH2Q9Y6C5 1203 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms