RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 TREML2Q5T2D2 321 aa16.34■□□□□ 0.21
CNOT1-206ENST00000564557 CTR9Q6PD62 1173 aa16.34■□□□□ 0.21
CNOT1-206ENST00000564557 C17orf99Q6UX52 265 aa16.34■□□□□ 0.21
CNOT1-206ENST00000564557 CCDC17Q96LX7 622 aa16.34■□□□□ 0.21
CNOT1-206ENST00000564557 MKNK2Q9HBH9 465 aa16.34■□□□□ 0.21
CNOT1-206ENST00000564557 ZNF287Q9HBT7 754 aa16.34■□□□□ 0.21
CNOT1-206ENST00000564557 PHIPQ8WWQ0 1821 aa16.33■□□□□ 0.21
CNOT1-206ENST00000564557 BAZ2AQ9UIF9 1905 aaKnown RBP16.33■□□□□ 0.21
CNOT1-206ENST00000564557 GSG1L2A8MUP6 293 aa16.33■□□□□ 0.2
CNOT1-206ENST00000564557 FMNL1O95466 1100 aaPredicted RBP16.33■□□□□ 0.2
CNOT1-206ENST00000564557 SLC3A2P08195 630 aaKnown RBP16.33■□□□□ 0.2
CNOT1-206ENST00000564557 HOXD10P28358 340 aa16.33■□□□□ 0.2
CNOT1-206ENST00000564557 CDK8P49336 464 aa16.33■□□□□ 0.2
CNOT1-206ENST00000564557 LACTBP83111 547 aaPredicted RBP16.33■□□□□ 0.2
CNOT1-206ENST00000564557 ZYXQ15942 572 aaKnown RBP16.33■□□□□ 0.2
CNOT1-206ENST00000564557 TMEM179Q6ZVK1 233 aa16.33■□□□□ 0.2
CNOT1-206ENST00000564557 TICAM2Q86XR7 235 aa16.33■□□□□ 0.2
CNOT1-206ENST00000564557 PLEKHM2Q8IWE5 1019 aa16.33■□□□□ 0.2
CNOT1-206ENST00000564557 SLC44A5Q8NCS7 719 aa16.33■□□□□ 0.2
CNOT1-206ENST00000564557 SEC62Q99442 399 aaKnown RBP16.33■□□□□ 0.2
CNOT1-206ENST00000564557 NAPBQ9H115 298 aa16.33■□□□□ 0.2
CNOT1-206ENST00000564557 GNRH1P01148 92 aa16.32■□□□□ 0.2
CNOT1-206ENST00000564557 SEPT2Q15019 361 aa16.32■□□□□ 0.2
CNOT1-206ENST00000564557 SBK1Q52WX2 424 aa16.32■□□□□ 0.2
CNOT1-206ENST00000564557 C16orf86Q6ZW13 317 aa16.32■□□□□ 0.2
CNOT1-206ENST00000564557 IFNL3Q8IZI9 196 aa16.32■□□□□ 0.2
CNOT1-206ENST00000564557 STK11IPQ8N1F8 1099 aa16.32■□□□□ 0.2
CNOT1-206ENST00000564557 OSBPL3Q9H4L5 887 aa16.32■□□□□ 0.2
CNOT1-206ENST00000564557 ARHGEF10LQ9HCE6 1279 aa16.32■□□□□ 0.2
CNOT1-206ENST00000564557 HELLSQ9NRZ9 838 aa16.32■□□□□ 0.2
CNOT1-206ENST00000564557 HPS5Q9UPZ3 1129 aa16.32■□□□□ 0.2
CNOT1-206ENST00000564557 PTPRFP10586 1907 aa16.31■□□□□ 0.2
CNOT1-206ENST00000564557 PRKAR2AP13861 404 aaKnown RBP16.31■□□□□ 0.2
CNOT1-206ENST00000564557 PSMC4P43686 418 aa16.31■□□□□ 0.2
CNOT1-206ENST00000564557 GCLCP48506 637 aaPredicted RBP16.31■□□□□ 0.2
CNOT1-206ENST00000564557 EVX2Q03828 476 aa16.31■□□□□ 0.2
CNOT1-206ENST00000564557 SH2D4AQ9H788 454 aa16.31■□□□□ 0.2
CNOT1-206ENST00000564557 PTPN22Q9Y2R2 807 aa16.31■□□□□ 0.2
CNOT1-206ENST00000564557 DDX60LQ5H9U9 1706 aaKnown RBP16.31■□□□□ 0.2
CNOT1-206ENST00000564557 BCRP11274 1271 aa16.3■□□□□ 0.2
CNOT1-206ENST00000564557 HOXA7P31268 230 aaPredicted RBP16.3■□□□□ 0.2
CNOT1-206ENST00000564557 FCGRTP55899 365 aa16.3■□□□□ 0.2
CNOT1-206ENST00000564557 ATP2B2Q01814 1243 aa16.3■□□□□ 0.2
CNOT1-206ENST00000564557 MCMDC2Q4G0Z9 681 aa16.3■□□□□ 0.2
CNOT1-206ENST00000564557 ZNF444Q8N0Y2 327 aaPredicted RBP16.3■□□□□ 0.2
CNOT1-206ENST00000564557 ANKRD13CQ8N6S4 541 aa16.3■□□□□ 0.2
CNOT1-206ENST00000564557 KIAA1683Q9H0B3 1180 aa16.3■□□□□ 0.2
CNOT1-206ENST00000564557 ASCC2Q9H1I8 757 aaPredicted RBP16.3■□□□□ 0.2
CNOT1-206ENST00000564557 MYH8P13535 1937 aa16.29■□□□□ 0.2
CNOT1-206ENST00000564557 ADGRA2Q96PE1 1338 aa16.29■□□□□ 0.2
CNOT1-206ENST00000564557 HIP1O00291 1037 aa16.29■□□□□ 0.2
CNOT1-206ENST00000564557 AKR1B1P15121 316 aa16.29■□□□□ 0.2
CNOT1-206ENST00000564557 MFAP1P55081 439 aaKnown RBP16.29■□□□□ 0.2
CNOT1-206ENST00000564557 PRMT2P55345 433 aa16.29■□□□□ 0.2
CNOT1-206ENST00000564557 ICA1Q05084 483 aa16.29■□□□□ 0.2
CNOT1-206ENST00000564557 PDE4BQ07343 736 aa16.29■□□□□ 0.2
CNOT1-206ENST00000564557 CCDC129Q6ZRS4 1044 aa16.29■□□□□ 0.2
CNOT1-206ENST00000564557 NBPF11Q86T75 865 aa16.29■□□□□ 0.2
CNOT1-206ENST00000564557 CCAR1Q8IX12 1150 aaKnown RBP16.29■□□□□ 0.2
CNOT1-206ENST00000564557 ACER1Q8TDN7 264 aa16.29■□□□□ 0.2
CNOT1-206ENST00000564557 ARHGAP39Q9C0H5 1083 aa16.29■□□□□ 0.2
CNOT1-206ENST00000564557 DIAPH3Q9NSV4 1193 aa16.29■□□□□ 0.2
CNOT1-206ENST00000564557 EMILIN3Q9NT22 766 aa16.29■□□□□ 0.2
CNOT1-206ENST00000564557 USP17L15C9J2P7 530 aa16.28■□□□□ 0.2
CNOT1-206ENST00000564557 USP17L13C9JLJ4 530 aa16.28■□□□□ 0.2
CNOT1-206ENST00000564557 USP17L11C9JVI0 530 aa16.28■□□□□ 0.2
CNOT1-206ENST00000564557 USP17L18D6R9N7 530 aa16.28■□□□□ 0.2
CNOT1-206ENST00000564557 USP17L22D6RA61 530 aa16.28■□□□□ 0.2
CNOT1-206ENST00000564557 USP17L17D6RBQ6 530 aa16.28■□□□□ 0.2
CNOT1-206ENST00000564557 USP17L19D6RCP7 530 aa16.28■□□□□ 0.2
CNOT1-206ENST00000564557 USP17L20D6RJB6 530 aa16.28■□□□□ 0.2
CNOT1-206ENST00000564557 USP17L24Q0WX57 530 aa16.28■□□□□ 0.2
CNOT1-206ENST00000564557 GTF3C2Q8WUA4 911 aaPredicted RBP16.28■□□□□ 0.2
CNOT1-206ENST00000564557 KANSL2Q9H9L4 492 aa16.28■□□□□ 0.2
CNOT1-206ENST00000564557 EPB41L4AQ9HCS5 686 aaPredicted RBP16.28■□□□□ 0.2
CNOT1-206ENST00000564557 SMIM22K7EJ46 135 aa16.27■□□□□ 0.2
CNOT1-206ENST00000564557 TNPO2O14787 897 aaKnown RBP16.27■□□□□ 0.2
CNOT1-206ENST00000564557 RAD21O60216 631 aa16.27■□□□□ 0.2
CNOT1-206ENST00000564557 SDSP20132 328 aa16.27■□□□□ 0.2
CNOT1-206ENST00000564557 GUCY1A2P33402 732 aa16.27■□□□□ 0.2
CNOT1-206ENST00000564557 NMIQ13287 307 aaPredicted RBP16.27■□□□□ 0.2
CNOT1-206ENST00000564557 FAM110CQ1W6H9 321 aa16.27■□□□□ 0.2
CNOT1-206ENST00000564557 SLC9C1Q4G0N8 1177 aa16.27■□□□□ 0.2
CNOT1-206ENST00000564557 RAET1EQ8TD07 263 aa16.27■□□□□ 0.2
CNOT1-206ENST00000564557 COA7Q96BR5 231 aa16.27■□□□□ 0.2
CNOT1-206ENST00000564557 C12orf42Q96LP6 360 aa16.27■□□□□ 0.2
CNOT1-206ENST00000564557 FAM227BQ96M60 508 aa16.27■□□□□ 0.2
CNOT1-206ENST00000564557 P2RX7Q99572 595 aaKnown RBP16.27■□□□□ 0.2
CNOT1-206ENST00000564557 LOC285556D6RIA3 1793 aa16.27■□□□□ 0.2
CNOT1-206ENST00000564557 HERVK_113P62684 666 aa16.26■□□□□ 0.19
CNOT1-206ENST00000564557 PPARAQ07869 468 aa16.26■□□□□ 0.19
CNOT1-206ENST00000564557 TRIM47Q96LD4 638 aa16.26■□□□□ 0.19
CNOT1-206ENST00000564557 CWC22Q9HCG8 908 aaKnown RBP16.26■□□□□ 0.19
CNOT1-206ENST00000564557 SRRDQ9UH36 339 aa16.26■□□□□ 0.19
CNOT1-206ENST00000564557 PTCH2Q9Y6C5 1203 aa16.26■□□□□ 0.19
CNOT1-206ENST00000564557 MYPNQ86TC9 1320 aa16.25■□□□□ 0.19
CNOT1-206ENST00000564557 A0A0D9SFI3 127 aa16.25■□□□□ 0.19
CNOT1-206ENST00000564557 NEFLP07196 543 aa16.25■□□□□ 0.19
CNOT1-206ENST00000564557 VCAM1P19320 739 aa16.25■□□□□ 0.19
CNOT1-206ENST00000564557 GPRC5AQ8NFJ5 357 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms