RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 SALL3Q9BXA9 1300 aa24.01■■□□□ 1.43
SHCBP1-203ENST00000564272 EN2P19622 333 aaPredicted RBP24■■□□□ 1.43
SHCBP1-203ENST00000564272 GRK4P32298 578 aa24■■□□□ 1.43
SHCBP1-203ENST00000564272 HERVK_113P62684 666 aa24■■□□□ 1.43
SHCBP1-203ENST00000564272 CTR9Q6PD62 1173 aa24■■□□□ 1.43
SHCBP1-203ENST00000564272 AMOTL1Q8IY63 956 aa24■■□□□ 1.43
SHCBP1-203ENST00000564272 GCC1Q96CN9 775 aa24■■□□□ 1.43
SHCBP1-203ENST00000564272 TMEM106CQ9BVX2 250 aa24■■□□□ 1.43
SHCBP1-203ENST00000564272 KIAA1683Q9H0B3 1180 aa24■■□□□ 1.43
SHCBP1-203ENST00000564272 ZBTB47Q9UFB7 747 aaPredicted RBP24■■□□□ 1.43
SHCBP1-203ENST00000564272 M0R2C6 588 aa23.99■■□□□ 1.43
SHCBP1-203ENST00000564272 ZFYP08048 801 aaPredicted RBP23.99■■□□□ 1.43
SHCBP1-203ENST00000564272 AKR1B1P15121 316 aa23.99■■□□□ 1.43
SHCBP1-203ENST00000564272 FLT3LGP49771 235 aa23.99■■□□□ 1.43
SHCBP1-203ENST00000564272 TXNRD2Q9NNW7 524 aa23.99■■□□□ 1.43
SHCBP1-203ENST00000564272 MORF4L1Q9UBU8 362 aa23.99■■□□□ 1.43
SHCBP1-203ENST00000564272 DOCK3Q8IZD9 2030 aa23.99■■□□□ 1.43
SHCBP1-203ENST00000564272 VCAM1P19320 739 aa23.98■■□□□ 1.43
SHCBP1-203ENST00000564272 CDK8P49336 464 aa23.98■■□□□ 1.43
SHCBP1-203ENST00000564272 USP14P54578 494 aa23.98■■□□□ 1.43
SHCBP1-203ENST00000564272 MTFR1Q15390 333 aa23.98■■□□□ 1.43
SHCBP1-203ENST00000564272 CLEC10AQ8IUN9 316 aa23.98■■□□□ 1.43
SHCBP1-203ENST00000564272 EXOC6Q8TAG9 804 aa23.98■■□□□ 1.43
SHCBP1-203ENST00000564272 COA7Q96BR5 231 aa23.98■■□□□ 1.43
SHCBP1-203ENST00000564272 FSD1Q9BTV5 496 aa23.98■■□□□ 1.43
SHCBP1-203ENST00000564272 A0A1W2PRG0 241 aa23.97■■□□□ 1.43
SHCBP1-203ENST00000564272 GSG1L2A8MUP6 293 aa23.97■■□□□ 1.43
SHCBP1-203ENST00000564272 GPAA1O43292 621 aa23.97■■□□□ 1.43
SHCBP1-203ENST00000564272 PDE4DIPQ5VU43 2346 aa23.97■■□□□ 1.43
SHCBP1-203ENST00000564272 TMEM179Q6ZVK1 233 aa23.97■■□□□ 1.43
SHCBP1-203ENST00000564272 C16orf86Q6ZW13 317 aa23.97■■□□□ 1.43
SHCBP1-203ENST00000564272 SLAIN1Q8ND83 568 aa23.97■■□□□ 1.43
SHCBP1-203ENST00000564272 ARPP21Q9UBL0 812 aaPredicted RBP23.97■■□□□ 1.43
SHCBP1-203ENST00000564272 TAOK2Q9UL54 1235 aa23.97■■□□□ 1.43
SHCBP1-203ENST00000564272 ELNP15502 786 aa23.96■■□□□ 1.43
SHCBP1-203ENST00000564272 AAMPQ13685 434 aa23.96■■□□□ 1.43
SHCBP1-203ENST00000564272 POTEEQ6S8J3 1075 aa23.96■■□□□ 1.43
SHCBP1-203ENST00000564272 EPB41L4AQ9HCS5 686 aaPredicted RBP23.96■■□□□ 1.43
SHCBP1-203ENST00000564272 BIN2Q9UBW5 565 aaPredicted RBP23.96■■□□□ 1.43
SHCBP1-203ENST00000564272 USP17L15C9J2P7 530 aa23.95■■□□□ 1.42
SHCBP1-203ENST00000564272 USP17L13C9JLJ4 530 aa23.95■■□□□ 1.42
SHCBP1-203ENST00000564272 USP17L11C9JVI0 530 aa23.95■■□□□ 1.42
SHCBP1-203ENST00000564272 USP17L18D6R9N7 530 aa23.95■■□□□ 1.42
SHCBP1-203ENST00000564272 USP17L22D6RA61 530 aa23.95■■□□□ 1.42
SHCBP1-203ENST00000564272 USP17L17D6RBQ6 530 aa23.95■■□□□ 1.42
SHCBP1-203ENST00000564272 USP17L19D6RCP7 530 aa23.95■■□□□ 1.42
SHCBP1-203ENST00000564272 USP17L20D6RJB6 530 aa23.95■■□□□ 1.42
SHCBP1-203ENST00000564272 ADCY3O60266 1144 aa23.95■■□□□ 1.42
SHCBP1-203ENST00000564272 USP17L24Q0WX57 530 aa23.95■■□□□ 1.42
SHCBP1-203ENST00000564272 GPRC5AQ8NFJ5 357 aa23.95■■□□□ 1.42
SHCBP1-203ENST00000564272 SEC62Q99442 399 aaKnown RBP23.95■■□□□ 1.42
SHCBP1-203ENST00000564272 PAGR1Q9BTK6 254 aa23.95■■□□□ 1.42
SHCBP1-203ENST00000564272 RBPJLQ9UBG7 517 aa23.95■■□□□ 1.42
SHCBP1-203ENST00000564272 BRCA2P51587 3418 aa23.94■■□□□ 1.42
SHCBP1-203ENST00000564272 ICA1Q05084 483 aa23.94■■□□□ 1.42
SHCBP1-203ENST00000564272 IRF5Q13568 498 aa23.94■■□□□ 1.42
SHCBP1-203ENST00000564272 LRRFIP1Q32MZ4 808 aaKnown RBP23.94■■□□□ 1.42
SHCBP1-203ENST00000564272 CATSPERGQ6ZRH7 1159 aa23.94■■□□□ 1.42
SHCBP1-203ENST00000564272 GTF3C2Q8WUA4 911 aaPredicted RBP23.94■■□□□ 1.42
SHCBP1-203ENST00000564272 RPAP3Q9H6T3 665 aaPredicted RBP23.94■■□□□ 1.42
SHCBP1-203ENST00000564272 ERVK-9P63128 1117 aa23.93■■□□□ 1.42
SHCBP1-203ENST00000564272 ERVK-24P63145 666 aa23.93■■□□□ 1.42
SHCBP1-203ENST00000564272 SBK1Q52WX2 424 aa23.93■■□□□ 1.42
SHCBP1-203ENST00000564272 GIMAP6Q6P9H5 292 aa23.93■■□□□ 1.42
SHCBP1-203ENST00000564272 STK11IPQ8N1F8 1099 aa23.93■■□□□ 1.42
SHCBP1-203ENST00000564272 CCDC17Q96LX7 622 aa23.93■■□□□ 1.42
SHCBP1-203ENST00000564272 STAP2Q9UGK3 403 aa23.93■■□□□ 1.42
SHCBP1-203ENST00000564272 PLXNB2O15031 1838 aa23.93■■□□□ 1.42
SHCBP1-203ENST00000564272 MINDY4BA8MYZ0 360 aa23.92■■□□□ 1.42
SHCBP1-203ENST00000564272 INHAP05111 366 aa23.92■■□□□ 1.42
SHCBP1-203ENST00000564272 CCL5P13501 91 aa23.92■■□□□ 1.42
SHCBP1-203ENST00000564272 GNAT2P19087 354 aa23.92■■□□□ 1.42
SHCBP1-203ENST00000564272 PDE1AP54750 535 aa23.92■■□□□ 1.42
SHCBP1-203ENST00000564272 UBXN2AP68543 259 aa23.92■■□□□ 1.42
SHCBP1-203ENST00000564272 Q3C1V9 767 aa23.92■■□□□ 1.42
SHCBP1-203ENST00000564272 KIAA1755Q5JYT7 1200 aa23.92■■□□□ 1.42
SHCBP1-203ENST00000564272 ZMYM1Q5SVZ6 1142 aa23.92■■□□□ 1.42
SHCBP1-203ENST00000564272 SIAH1Q8IUQ4 282 aa23.92■■□□□ 1.42
SHCBP1-203ENST00000564272 PXYLP1Q8TE99 480 aa23.92■■□□□ 1.42
SHCBP1-203ENST00000564272 LNPKQ9C0E8 428 aa23.92■■□□□ 1.42
SHCBP1-203ENST00000564272 RWDD1Q9H446 243 aaPredicted RBP23.92■■□□□ 1.42
SHCBP1-203ENST00000564272 SUPT16HQ9Y5B9 1047 aaKnown RBP23.92■■□□□ 1.42
SHCBP1-203ENST00000564272 ROBO3Q96MS0 1386 aa23.91■■□□□ 1.42
SHCBP1-203ENST00000564272 CNMDO75829 334 aa23.91■■□□□ 1.42
SHCBP1-203ENST00000564272 APPP05067 770 aa23.91■■□□□ 1.42
SHCBP1-203ENST00000564272 TDO2P48775 406 aa23.91■■□□□ 1.42
SHCBP1-203ENST00000564272 SMC5Q8IY18 1101 aa23.91■■□□□ 1.42
SHCBP1-203ENST00000564272 PORCNQ9H237 461 aa23.91■■□□□ 1.42
SHCBP1-203ENST00000564272 ARHGEF10LQ9HCE6 1279 aa23.91■■□□□ 1.42
SHCBP1-203ENST00000564272 GJD2Q9UKL4 321 aa23.91■■□□□ 1.42
SHCBP1-203ENST00000564272 SPDYE16A6NNV3 312 aaPredicted RBP23.9■■□□□ 1.42
SHCBP1-203ENST00000564272 IGHDP01880 384 aa23.9■■□□□ 1.42
SHCBP1-203ENST00000564272 B4GALNT3Q6L9W6 998 aa23.9■■□□□ 1.42
SHCBP1-203ENST00000564272 SHISA4Q96DD7 197 aa23.9■■□□□ 1.42
SHCBP1-203ENST00000564272 RNF208Q9H0X6 261 aa23.9■■□□□ 1.42
SHCBP1-203ENST00000564272 UNC93B1Q9H1C4 597 aa23.9■■□□□ 1.42
SHCBP1-203ENST00000564272 GREB1LQ9C091 1923 aaPredicted RBP23.9■■□□□ 1.42
SHCBP1-203ENST00000564272 TANGO6Q9C0B7 1094 aa23.89■■□□□ 1.41
SHCBP1-203ENST00000564272 RABGAP1Q9Y3P9 1069 aa23.89■■□□□ 1.41
SHCBP1-203ENST00000564272 PATL2C9JE40 543 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms