RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 SLC26A8Q96RN1 970 aa6.33□□□□□ -1.4
CDR2-203ENST00000563573 POLR3GLQ9BT43 218 aa6.33□□□□□ -1.4
CDR2-203ENST00000563573 WDR18Q9BV38 432 aa6.33□□□□□ -1.4
CDR2-203ENST00000563573 ATXN3LQ9H3M9 355 aa6.33□□□□□ -1.4
CDR2-203ENST00000563573 KRT82Q9NSB4 513 aa6.33□□□□□ -1.4
CDR2-203ENST00000563573 FAM105AQ9NUU6 356 aa6.33□□□□□ -1.4
CDR2-203ENST00000563573 YTHDC2Q9H6S0 1430 aaKnown RBP6.33□□□□□ -1.4
CDR2-203ENST00000563573 DIP2AQ14689 1571 aa6.32□□□□□ -1.4
CDR2-203ENST00000563573 CENPJQ9HC77 1338 aaPredicted RBP6.32□□□□□ -1.4
CDR2-203ENST00000563573 DDX10Q13206 875 aaKnown RBP6.32□□□□□ -1.4
CDR2-203ENST00000563573 GRM2Q14416 872 aa6.32□□□□□ -1.4
CDR2-203ENST00000563573 OGFOD3Q6PK18 319 aa6.32□□□□□ -1.4
CDR2-203ENST00000563573 KRTAP4-12Q9BQ66 201 aa6.32□□□□□ -1.4
CDR2-203ENST00000563573 PIDD1Q9HB75 910 aa6.32□□□□□ -1.4
CDR2-203ENST00000563573 ADGRE2Q9UHX3 823 aa6.32□□□□□ -1.4
CDR2-203ENST00000563573 RNF114Q9Y508 228 aa6.32□□□□□ -1.4
CDR2-203ENST00000563573 PIK3R4Q99570 1358 aa6.31□□□□□ -1.4
CDR2-203ENST00000563573 SETD1AO15047 1707 aaKnown RBP6.31□□□□□ -1.4
CDR2-203ENST00000563573 SOWAHDA6NJG2 315 aa6.31□□□□□ -1.4
CDR2-203ENST00000563573 FAM170BA6NMN3 283 aa6.31□□□□□ -1.4
CDR2-203ENST00000563573 SEZ6L2Q6UXD5 910 aa6.31□□□□□ -1.4
CDR2-203ENST00000563573 TP53INP2Q8IXH6 220 aa6.31□□□□□ -1.4
CDR2-203ENST00000563573 TMEM39AQ9NV64 488 aa6.31□□□□□ -1.4
CDR2-203ENST00000563573 DCTN4Q9UJW0 460 aa6.31□□□□□ -1.4
CDR2-203ENST00000563573 GNEQ9Y223 722 aaKnown RBP6.31□□□□□ -1.4
CDR2-203ENST00000563573 DAGLAQ9Y4D2 1042 aa6.31□□□□□ -1.4
CDR2-203ENST00000563573 CHD2O14647 1828 aaKnown RBP6.31□□□□□ -1.4
CDR2-203ENST00000563573 NRXN3Q9Y4C0 1643 aa6.31□□□□□ -1.4
CDR2-203ENST00000563573 ADGRB1O14514 1584 aa6.31□□□□□ -1.4
CDR2-203ENST00000563573 LRPPRCP42704 1394 aaKnown RBP6.31□□□□□ -1.4
CDR2-203ENST00000563573 ABCC11Q96J66 1382 aa6.31□□□□□ -1.4
CDR2-203ENST00000563573 ARHGEF28Q8N1W1 1705 aaKnown RBP6.3□□□□□ -1.4
CDR2-203ENST00000563573 EVC2Q86UK5 1308 aa6.3□□□□□ -1.4
CDR2-203ENST00000563573 QRICH2Q9H0J4 1663 aa6.3□□□□□ -1.4
CDR2-203ENST00000563573 MED14O60244 1454 aa6.3□□□□□ -1.4
CDR2-203ENST00000563573 ECEL1O95672 775 aa6.3□□□□□ -1.4
CDR2-203ENST00000563573 BRD1O95696 1058 aa6.3□□□□□ -1.4
CDR2-203ENST00000563573 GSTP1P09211 210 aaKnown RBP6.3□□□□□ -1.4
CDR2-203ENST00000563573 ID3Q02535 119 aa6.3□□□□□ -1.4
CDR2-203ENST00000563573 KIF4BQ2VIQ3 1234 aa6.3□□□□□ -1.4
CDR2-203ENST00000563573 ZNF765Q7L2R6 523 aa6.3□□□□□ -1.4
CDR2-203ENST00000563573 ABI1Q8IZP0 508 aa6.3□□□□□ -1.4
CDR2-203ENST00000563573 STK11IPQ8N1F8 1099 aa6.3□□□□□ -1.4
CDR2-203ENST00000563573 EPS8L3Q8TE67 593 aaKnown RBP6.3□□□□□ -1.4
CDR2-203ENST00000563573 PRAM1Q96QH2 718 aa6.3□□□□□ -1.4
CDR2-203ENST00000563573 EMILIN2Q9BXX0 1053 aa6.3□□□□□ -1.4
CDR2-203ENST00000563573 C1GALT1Q9NS00 363 aa6.3□□□□□ -1.4
CDR2-203ENST00000563573 CRIM1Q9NZV1 1036 aa6.3□□□□□ -1.4
CDR2-203ENST00000563573 BIN2Q9UBW5 565 aaPredicted RBP6.3□□□□□ -1.4
CDR2-203ENST00000563573 NPHP4O75161 1426 aaPredicted RBP6.3□□□□□ -1.4
CDR2-203ENST00000563573 KNDC1Q76NI1 1749 aa6.3□□□□□ -1.4
CDR2-203ENST00000563573 METP08581 1390 aa6.3□□□□□ -1.4
CDR2-203ENST00000563573 CCDC7Q96M83 1385 aa6.3□□□□□ -1.4
CDR2-203ENST00000563573 WASHC2AQ641Q2 1341 aa6.29□□□□□ -1.4
CDR2-203ENST00000563573 TMPRSS2O15393 492 aa6.29□□□□□ -1.4
CDR2-203ENST00000563573 LIG1P18858 919 aa6.29□□□□□ -1.4
CDR2-203ENST00000563573 HSPA2P54652 639 aa6.29□□□□□ -1.4
CDR2-203ENST00000563573 FCGRTP55899 365 aa6.29□□□□□ -1.4
CDR2-203ENST00000563573 PLCB3Q01970 1234 aa6.29□□□□□ -1.4
CDR2-203ENST00000563573 FAAP100Q0VG06 881 aa6.29□□□□□ -1.4
CDR2-203ENST00000563573 SAFB2Q14151 953 aaKnown RBP eCLIP6.29□□□□□ -1.4
CDR2-203ENST00000563573 ADAMTS13Q76LX8 1427 aa6.29□□□□□ -1.4
CDR2-203ENST00000563573 WAPLQ7Z5K2 1190 aa6.29□□□□□ -1.4
CDR2-203ENST00000563573 SHISA5Q8N114 240 aa6.29□□□□□ -1.4
CDR2-203ENST00000563573 GLIS3Q8NEA6 775 aa6.29□□□□□ -1.4
CDR2-203ENST00000563573 MISP3Q96FF7 219 aa6.29□□□□□ -1.4
CDR2-203ENST00000563573 PUS7Q96PZ0 661 aaKnown RBP6.29□□□□□ -1.4
CDR2-203ENST00000563573 TESK2Q96S53 571 aa6.29□□□□□ -1.4
CDR2-203ENST00000563573 CCDC86Q9H6F5 360 aaKnown RBP6.29□□□□□ -1.4
CDR2-203ENST00000563573 LRRC4CQ9HCJ2 640 aa6.29□□□□□ -1.4
CDR2-203ENST00000563573 GPN3Q9UHW5 284 aaPredicted RBP6.29□□□□□ -1.4
CDR2-203ENST00000563573 PPP1R9AQ9ULJ8 1098 aa6.29□□□□□ -1.4
CDR2-203ENST00000563573 DLC1Q96QB1 1528 aa6.29□□□□□ -1.4
CDR2-203ENST00000563573 KIF7Q2M1P5 1343 aa6.28□□□□□ -1.4
CDR2-203ENST00000563573 FAM135BQ49AJ0 1406 aa6.28□□□□□ -1.4
CDR2-203ENST00000563573 YBX3P16989 372 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDR2-203ENST00000563573 KCNA6P17658 529 aa6.28□□□□□ -1.4
CDR2-203ENST00000563573 LCE3BQ5TA77 95 aa6.28□□□□□ -1.4
CDR2-203ENST00000563573 TMC7Q7Z402 723 aa6.28□□□□□ -1.4
CDR2-203ENST00000563573 FLCNQ8NFG4 579 aa6.28□□□□□ -1.4
CDR2-203ENST00000563573 FANCD2OSQ96PS1 177 aa6.28□□□□□ -1.4
CDR2-203ENST00000563573 ZC3H7BQ9UGR2 993 aaKnown RBP6.28□□□□□ -1.4
CDR2-203ENST00000563573 SLC5A6Q9Y289 635 aa6.28□□□□□ -1.4
CDR2-203ENST00000563573 SBNO2Q9Y2G9 1366 aa6.28□□□□□ -1.4
CDR2-203ENST00000563573 ASXL1Q8IXJ9 1541 aa6.27□□□□□ -1.41
CDR2-203ENST00000563573 ANP32CO43423 234 aa6.27□□□□□ -1.41
CDR2-203ENST00000563573 JUNBP17275 347 aaPredicted RBP6.27□□□□□ -1.41
CDR2-203ENST00000563573 ZNF157P51786 506 aaPredicted RBP6.27□□□□□ -1.41
CDR2-203ENST00000563573 KRTAP1-3Q8IUG1 177 aa6.27□□□□□ -1.41
CDR2-203ENST00000563573 SMYD4Q8IYR2 804 aaPredicted RBP6.27□□□□□ -1.41
CDR2-203ENST00000563573 ASIC4Q96FT7 647 aa6.27□□□□□ -1.41
CDR2-203ENST00000563573 CDK19Q9BWU1 502 aa6.27□□□□□ -1.41
CDR2-203ENST00000563573 BCO2Q9BYV7 579 aa6.27□□□□□ -1.41
CDR2-203ENST00000563573 SRCIN1Q9C0H9 1055 aa6.27□□□□□ -1.41
CDR2-203ENST00000563573 PCOLCE2Q9UKZ9 415 aa6.27□□□□□ -1.41
CDR2-203ENST00000563573 SAMM50Q9Y512 469 aa6.27□□□□□ -1.41
CDR2-203ENST00000563573 LMTK3Q96Q04 1460 aa6.27□□□□□ -1.41
CDR2-203ENST00000563573 STRCQ7RTU9 1775 aa6.26□□□□□ -1.41
CDR2-203ENST00000563573 CPS1P31327 1500 aa6.26□□□□□ -1.41
CDR2-203ENST00000563573 ZNF862O60290 1169 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms