RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 USP17L2Q6R6M4 530 aa33.87■■■■□ 3.01
NME3-203ENST00000563367 SMCR8Q8TEV9 937 aaPredicted RBP33.87■■■■□ 3.01
NME3-203ENST00000563367 ASCC2Q9H1I8 757 aaPredicted RBP33.87■■■■□ 3.01
NME3-203ENST00000563367 PDE4AP27815 886 aa33.86■■■■□ 3.01
NME3-203ENST00000563367 TDO2P48775 406 aa33.86■■■■□ 3.01
NME3-203ENST00000563367 PABPC4Q13310 644 aaKnown RBP eCLIP33.86■■■■□ 3.012e-8■■■■■ 36.1
NME3-203ENST00000563367 KIF22Q14807 665 aa33.86■■■■□ 3.01
NME3-203ENST00000563367 RILPL2Q969X0 211 aa33.86■■■■□ 3.01
NME3-203ENST00000563367 FEZ1Q99689 392 aa33.86■■■■□ 3.01
NME3-203ENST00000563367 TMEM179Q6ZVK1 233 aa33.85■■■■□ 3.01
NME3-203ENST00000563367 STK11IPQ8N1F8 1099 aa33.85■■■■□ 3.01
NME3-203ENST00000563367 FAM227BQ96M60 508 aa33.85■■■■□ 3.01
NME3-203ENST00000563367 KIAA1683Q9H0B3 1180 aa33.85■■■■□ 3.01
NME3-203ENST00000563367 FOXP2O15409 715 aa33.84■■■■□ 3.01
NME3-203ENST00000563367 OSBPP22059 807 aa33.84■■■■□ 3.01
NME3-203ENST00000563367 HOXA7P31268 230 aaPredicted RBP33.84■■■■□ 3.01
NME3-203ENST00000563367 ARHGEF6Q15052 776 aa33.84■■■■□ 3.01
NME3-203ENST00000563367 DOCK3Q8IZD9 2030 aa33.84■■■■□ 3.01
NME3-203ENST00000563367 A0A1W2PRG0 241 aa33.83■■■■□ 3.01
NME3-203ENST00000563367 PSMC4P43686 418 aa33.83■■■■□ 3.01
NME3-203ENST00000563367 CLEC10AQ8IUN9 316 aa33.83■■■■□ 3.01
NME3-203ENST00000563367 ANKRD13CQ8N6S4 541 aa33.83■■■■□ 3.01
NME3-203ENST00000563367 TRIM47Q96LD4 638 aa33.83■■■■□ 3.01
NME3-203ENST00000563367 C12orf42Q96LP6 360 aa33.83■■■■□ 3.01
NME3-203ENST00000563367 CCDC17Q96LX7 622 aa33.83■■■■□ 3.01
NME3-203ENST00000563367 HELLSQ9NRZ9 838 aa33.83■■■■□ 3.01
NME3-203ENST00000563367 ROBO3Q96MS0 1386 aa33.83■■■■□ 3.01
NME3-203ENST00000563367 GREB1LQ9C091 1923 aaPredicted RBP33.83■■■■□ 3.01
NME3-203ENST00000563367 A0A0D9SFI3 127 aa33.82■■■■□ 3
NME3-203ENST00000563367 TICAM2Q86XR7 235 aa33.82■■■■□ 3
NME3-203ENST00000563367 NACAP1Q9BZK3 213 aa33.82■■■■□ 3
NME3-203ENST00000563367 SIAH1Q8IUQ4 282 aa33.81■■■■□ 3
NME3-203ENST00000563367 P2RX7Q99572 595 aaKnown RBP33.81■■■■□ 3
NME3-203ENST00000563367 USP14P54578 494 aa33.8■■■■□ 3
NME3-203ENST00000563367 IRX3P78415 501 aaPredicted RBP33.8■■■■□ 3
NME3-203ENST00000563367 NMIQ13287 307 aaPredicted RBP33.8■■■■□ 3
NME3-203ENST00000563367 VPS53Q5VIR6 699 aa33.8■■■■□ 3
NME3-203ENST00000563367 MCMDC2Q4G0Z9 681 aa33.79■■■■□ 3
NME3-203ENST00000563367 NAPBQ9H115 298 aa33.79■■■■□ 3
NME3-203ENST00000563367 PTCH2Q9Y6C5 1203 aa33.79■■■■□ 3
NME3-203ENST00000563367 CENPFP49454 3210 aa33.78■■■■□ 3
NME3-203ENST00000563367 FMNL1O95466 1100 aaPredicted RBP33.78■■■■□ 3
NME3-203ENST00000563367 GNRH1P01148 92 aa33.78■■■■□ 3
NME3-203ENST00000563367 SDSP20132 328 aa33.78■■■■□ 3
NME3-203ENST00000563367 RASA1P20936 1047 aa33.78■■■■□ 3
NME3-203ENST00000563367 GCLCP48506 637 aaPredicted RBP33.78■■■■□ 3
NME3-203ENST00000563367 VCAM1P19320 739 aa33.77■■■■□ 3
NME3-203ENST00000563367 FAM110CQ1W6H9 321 aa33.77■■■■□ 3
NME3-203ENST00000563367 GNL3Q9BVP2 549 aaKnown RBP eCLIP33.77■■■■□ 3
NME3-203ENST00000563367 MKNK2Q9HBH9 465 aa33.77■■■■□ 3
NME3-203ENST00000563367 HERVK_113P62684 666 aa33.76■■■□□ 2.99
NME3-203ENST00000563367 ICA1Q05084 483 aa33.76■■■□□ 2.99
NME3-203ENST00000563367 ZNF589Q86UQ0 364 aaPredicted RBP33.76■■■□□ 2.99
NME3-203ENST00000563367 PEX10O60683 326 aa33.75■■■□□ 2.99
NME3-203ENST00000563367 FCGRTP55899 365 aa33.75■■■□□ 2.99
NME3-203ENST00000563367 KIAA1755Q5JYT7 1200 aa33.75■■■□□ 2.99
NME3-203ENST00000563367 SRRDQ9UH36 339 aa33.75■■■□□ 2.99
NME3-203ENST00000563367 USP17L15C9J2P7 530 aa33.74■■■□□ 2.99
NME3-203ENST00000563367 USP17L13C9JLJ4 530 aa33.74■■■□□ 2.99
NME3-203ENST00000563367 USP17L11C9JVI0 530 aa33.74■■■□□ 2.99
NME3-203ENST00000563367 USP17L18D6R9N7 530 aa33.74■■■□□ 2.99
NME3-203ENST00000563367 USP17L22D6RA61 530 aa33.74■■■□□ 2.99
NME3-203ENST00000563367 USP17L17D6RBQ6 530 aa33.74■■■□□ 2.99
NME3-203ENST00000563367 USP17L19D6RCP7 530 aa33.74■■■□□ 2.99
NME3-203ENST00000563367 USP17L20D6RJB6 530 aa33.74■■■□□ 2.99
NME3-203ENST00000563367 PRDM1O75626 825 aa33.74■■■□□ 2.99
NME3-203ENST00000563367 PPARAQ07869 468 aa33.74■■■□□ 2.99
NME3-203ENST00000563367 USP17L24Q0WX57 530 aa33.74■■■□□ 2.99
NME3-203ENST00000563367 POTEEQ6S8J3 1075 aa33.74■■■□□ 2.99
NME3-203ENST00000563367 CATSPERGQ6ZRH7 1159 aa33.74■■■□□ 2.99
NME3-203ENST00000563367 ARHGEF10LQ9HCE6 1279 aa33.74■■■□□ 2.99
NME3-203ENST00000563367 EEF2P13639 858 aaKnown RBP33.73■■■□□ 2.99
NME3-203ENST00000563367 KANSL2Q9H9L4 492 aa33.73■■■□□ 2.99
NME3-203ENST00000563367 TXNRD2Q9NNW7 524 aa33.73■■■□□ 2.99
NME3-203ENST00000563367 TMX2Q9Y320 296 aa33.73■■■□□ 2.99
NME3-203ENST00000563367 RLFQ13129 1914 aa33.73■■■□□ 2.99
NME3-203ENST00000563367 MYH4Q9Y623 1939 aa33.73■■■□□ 2.99
NME3-203ENST00000563367 PRMT2P55345 433 aa33.72■■■□□ 2.99
NME3-203ENST00000563367 SOX10P56693 466 aa33.72■■■□□ 2.99
NME3-203ENST00000563367 RPAP3Q9H6T3 665 aaPredicted RBP33.72■■■□□ 2.99
NME3-203ENST00000563367 RBPJLQ9UBG7 517 aa33.72■■■□□ 2.99
NME3-203ENST00000563367 MORF4L1Q9UBU8 362 aa33.72■■■□□ 2.99
NME3-203ENST00000563367 GSPT1P15170 499 aaKnown RBP33.71■■■□□ 2.99
NME3-203ENST00000563367 HOXD10P28358 340 aa33.71■■■□□ 2.99
NME3-203ENST00000563367 ALX1Q15699 326 aa33.71■■■□□ 2.99
NME3-203ENST00000563367 TTC22Q5TAA0 569 aa33.71■■■□□ 2.99
NME3-203ENST00000563367 GABRQQ9UN88 632 aa33.71■■■□□ 2.99
NME3-203ENST00000563367 MYPNQ86TC9 1320 aa33.71■■■□□ 2.99
NME3-203ENST00000563367 HSPD1P10809 573 aaKnown RBP33.7■■■□□ 2.99
NME3-203ENST00000563367 ATP2B2Q01814 1243 aa33.7■■■□□ 2.99
NME3-203ENST00000563367 ARMC5Q96C12 935 aa33.7■■■□□ 2.99
NME3-203ENST00000563367 CCDC171Q6TFL3 1326 aa33.7■■■□□ 2.99
NME3-203ENST00000563367 PARP14Q460N5 1801 aa33.69■■■□□ 2.98
NME3-203ENST00000563367 PRKCZQ05513 592 aa33.69■■■□□ 2.98
NME3-203ENST00000563367 CTDSPL2Q05D32 466 aa33.69■■■□□ 2.98
NME3-203ENST00000563367 ZNF444Q8N0Y2 327 aaPredicted RBP33.69■■■□□ 2.98
NME3-203ENST00000563367 ZNF287Q9HBT7 754 aa33.69■■■□□ 2.98
NME3-203ENST00000563367 TNPO2O14787 897 aaKnown RBP33.68■■■□□ 2.98
NME3-203ENST00000563367 FGAP02671 866 aa33.68■■■□□ 2.98
NME3-203ENST00000563367 SLC9C1Q4G0N8 1177 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms