RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 MLLT1Q03111 559 aaPredicted RBP10.2□□□□□ -0.78
UBR1-204ENST00000563239 PPARAQ07869 468 aa10.2□□□□□ -0.78
UBR1-204ENST00000563239 MTMR2Q13614 643 aa10.2□□□□□ -0.78
UBR1-204ENST00000563239 RAB3GAP1Q15042 981 aa10.2□□□□□ -0.78
UBR1-204ENST00000563239 TAF1CQ15572 869 aaPredicted RBP10.2□□□□□ -0.78
UBR1-204ENST00000563239 SAMD1Q6SPF0 538 aaPredicted RBP10.2□□□□□ -0.78
UBR1-204ENST00000563239 GADL1Q6ZQY3 521 aa10.2□□□□□ -0.78
UBR1-204ENST00000563239 CLEC10AQ8IUN9 316 aa10.2□□□□□ -0.78
UBR1-204ENST00000563239 AMOTL1Q8IY63 956 aa10.2□□□□□ -0.78
UBR1-204ENST00000563239 STK11IPQ8N1F8 1099 aa10.2□□□□□ -0.78
UBR1-204ENST00000563239 PROCA1Q8NCQ7 364 aaPredicted RBP10.2□□□□□ -0.78
UBR1-204ENST00000563239 NACAP1Q9BZK3 213 aa10.2□□□□□ -0.78
UBR1-204ENST00000563239 NBPF3Q9H094 633 aa10.2□□□□□ -0.78
UBR1-204ENST00000563239 NAPBQ9H115 298 aa10.2□□□□□ -0.78
UBR1-204ENST00000563239 AS3MTQ9HBK9 375 aa10.2□□□□□ -0.78
UBR1-204ENST00000563239 DIAPH3Q9NSV4 1193 aa10.2□□□□□ -0.78
UBR1-204ENST00000563239 EMILIN3Q9NT22 766 aa10.2□□□□□ -0.78
UBR1-204ENST00000563239 PPP4R2Q9NY27 417 aa10.2□□□□□ -0.78
UBR1-204ENST00000563239 ANAPC4Q9UJX5 808 aa10.2□□□□□ -0.78
UBR1-204ENST00000563239 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.2□□□□□ -0.78
UBR1-204ENST00000563239 HTTP42858 3142 aa10.2□□□□□ -0.78
UBR1-204ENST00000563239 CASP8AP2Q9UKL3 1982 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 GREB1LQ9C091 1923 aaPredicted RBP10.19□□□□□ -0.78
UBR1-204ENST00000563239 ZMYM6O95789 1325 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 IGKV6D-41A0A0C4DH26 115 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 C19orf81C9J6K1 198 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 USP17L10C9JJH3 530 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 MPHOSPH10O00566 681 aaKnown RBP10.19□□□□□ -0.78
UBR1-204ENST00000563239 TLR2O60603 784 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 PRDM1O75626 825 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 FGRP09769 529 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 CYP2C8P10632 490 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 CTDSPL2Q05D32 466 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 KIAA1755Q5JYT7 1200 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 C17orf99Q6UX52 265 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 TMEM179Q6ZVK1 233 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 NKX2-3Q8TAU0 364 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 CCDC17Q96LX7 622 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 KIAA1683Q9H0B3 1180 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 ZFYVE28Q9HCC9 887 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 CABP5Q9NP86 173 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 AGTPBP1Q9UPW5 1226 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 SLC45A1Q9Y2W3 748 aa10.19□□□□□ -0.78
UBR1-204ENST00000563239 FKTNO75072 461 aa10.18□□□□□ -0.78
UBR1-204ENST00000563239 BMP2KLQ5H9B9 411 aa10.18□□□□□ -0.78
UBR1-204ENST00000563239 USP17L2Q6R6M4 530 aa10.18□□□□□ -0.78
UBR1-204ENST00000563239 POTEEQ6S8J3 1075 aa10.18□□□□□ -0.78
UBR1-204ENST00000563239 C12orf42Q96LP6 360 aa10.18□□□□□ -0.78
UBR1-204ENST00000563239 SGSM2O43147 1006 aa10.17□□□□□ -0.78
UBR1-204ENST00000563239 BCRP11274 1271 aa10.17□□□□□ -0.78
UBR1-204ENST00000563239 CTGFP29279 349 aa10.17□□□□□ -0.78
UBR1-204ENST00000563239 HOXA7P31268 230 aaPredicted RBP10.17□□□□□ -0.78
UBR1-204ENST00000563239 MFAP1P55081 439 aaKnown RBP10.17□□□□□ -0.78
UBR1-204ENST00000563239 PTH1RQ03431 593 aa10.17□□□□□ -0.78
UBR1-204ENST00000563239 TBC1D10CQ8IV04 446 aa10.17□□□□□ -0.78
UBR1-204ENST00000563239 DSCC1Q9BVC3 393 aa10.17□□□□□ -0.78
UBR1-204ENST00000563239 ASCC2Q9H1I8 757 aaPredicted RBP10.17□□□□□ -0.78
UBR1-204ENST00000563239 KANSL2Q9H9L4 492 aa10.17□□□□□ -0.78
UBR1-204ENST00000563239 MKNK2Q9HBH9 465 aa10.17□□□□□ -0.78
UBR1-204ENST00000563239 CPA4Q9UI42 421 aa10.17□□□□□ -0.78
UBR1-204ENST00000563239 TMX2Q9Y320 296 aa10.17□□□□□ -0.78
UBR1-204ENST00000563239 MYH8P13535 1937 aa10.17□□□□□ -0.78
UBR1-204ENST00000563239 PLIN4Q96Q06 1357 aa10.16□□□□□ -0.78
UBR1-204ENST00000563239 RAD50Q92878 1312 aa10.16□□□□□ -0.78
UBR1-204ENST00000563239 ORC4O43929 436 aa10.16□□□□□ -0.78
UBR1-204ENST00000563239 EEF2P13639 858 aaKnown RBP10.16□□□□□ -0.78
UBR1-204ENST00000563239 VCAM1P19320 739 aa10.16□□□□□ -0.78
UBR1-204ENST00000563239 HAND2P61296 217 aa10.16□□□□□ -0.78
UBR1-204ENST00000563239 SP3Q02447 781 aa10.16□□□□□ -0.78
UBR1-204ENST00000563239 ICA1Q05084 483 aa10.16□□□□□ -0.78
UBR1-204ENST00000563239 PDE4BQ07343 736 aa10.16□□□□□ -0.78
UBR1-204ENST00000563239 ZYXQ15942 572 aaKnown RBP10.16□□□□□ -0.78
UBR1-204ENST00000563239 FAM47AQ5JRC9 791 aa10.16□□□□□ -0.78
UBR1-204ENST00000563239 ZNF444Q8N0Y2 327 aaPredicted RBP10.16□□□□□ -0.78
UBR1-204ENST00000563239 NEDD1Q8NHV4 660 aa10.16□□□□□ -0.78
UBR1-204ENST00000563239 CD99L2Q8TCZ2 262 aa10.16□□□□□ -0.78
UBR1-204ENST00000563239 PARK7Q99497 189 aaKnown RBP10.16□□□□□ -0.78
UBR1-204ENST00000563239 P2RX7Q99572 595 aaKnown RBP10.16□□□□□ -0.78
UBR1-204ENST00000563239 IL17RBQ9NRM6 502 aa10.16□□□□□ -0.78
UBR1-204ENST00000563239 TMOD4Q9NZQ9 345 aa10.16□□□□□ -0.78
UBR1-204ENST00000563239 PDE4DIPQ5VU43 2346 aa10.16□□□□□ -0.78
UBR1-204ENST00000563239 PEX10O60683 326 aa10.15□□□□□ -0.78
UBR1-204ENST00000563239 SLC3A2P08195 630 aaKnown RBP10.15□□□□□ -0.78
UBR1-204ENST00000563239 NOVP48745 357 aa10.15□□□□□ -0.78
UBR1-204ENST00000563239 USP14P54578 494 aa10.15□□□□□ -0.78
UBR1-204ENST00000563239 TFAP4Q01664 338 aa10.15□□□□□ -0.78
UBR1-204ENST00000563239 CATSPERGQ6ZRH7 1159 aa10.15□□□□□ -0.78
UBR1-204ENST00000563239 MKL1Q969V6 931 aa10.15□□□□□ -0.78
UBR1-204ENST00000563239 CEP95Q96GE4 821 aa10.15□□□□□ -0.78
UBR1-204ENST00000563239 FEZ1Q99689 392 aa10.15□□□□□ -0.78
UBR1-204ENST00000563239 ARHGAP39Q9C0H5 1083 aa10.15□□□□□ -0.78
UBR1-204ENST00000563239 ZNF287Q9HBT7 754 aa10.15□□□□□ -0.78
UBR1-204ENST00000563239 MTMR4Q9NYA4 1195 aa10.15□□□□□ -0.78
UBR1-204ENST00000563239 NYAP2Q9P242 653 aa10.15□□□□□ -0.78
UBR1-204ENST00000563239 ZSWIM8A7E2V4 1837 aa10.14□□□□□ -0.79
UBR1-204ENST00000563239 NMT2O60551 498 aa10.14□□□□□ -0.79
UBR1-204ENST00000563239 OSBPP22059 807 aa10.14□□□□□ -0.79
UBR1-204ENST00000563239 LACTBP83111 547 aaPredicted RBP10.14□□□□□ -0.79
UBR1-204ENST00000563239 PABPC4Q13310 644 aaKnown RBP eCLIP10.14□□□□□ -0.79
UBR1-204ENST00000563239 AKNAD1Q5T1N1 836 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms