RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ABLIM3O94929 683 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 BTF3P20290 206 aaKnown RBP5.52□□□□□ -1.53
SMG1-207ENST00000563235 HOXD12P35452 270 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 ATP2B2Q01814 1243 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 FAM117BQ6P1L5 589 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 C3orf67Q6ZVT6 689 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 SPATC1Q76KD6 591 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 SRLQ86TD4 932 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 FAM169BQ8N8A8 192 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 NIF3L1Q9GZT8 377 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 AK5Q9Y6K8 562 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 MED1Q15648 1581 aaPredicted RBP5.52□□□□□ -1.53
SMG1-207ENST00000563235 ABHD14A-ACY1A0A1B0GW23 586 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 KLHL33A6NCF5 533 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 SGTAO43765 313 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 FZD6O60353 706 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 PLOD3O60568 738 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 TPM3P06753 285 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 CTNNA1P35221 906 aaKnown RBP5.52□□□□□ -1.53
SMG1-207ENST00000563235 G3BP1Q13283 466 aaKnown RBP eCLIP5.52□□□□□ -1.53
SMG1-207ENST00000563235 MYBPC3Q14896 1274 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 SAFBQ15424 915 aaKnown RBP eCLIP5.52□□□□□ -1.53
SMG1-207ENST00000563235 BTN2A1Q7KYR7 527 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 NIM1KQ8IY84 436 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 GSDMBQ8TAX9 411 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 RBM18Q96H35 190 aaKnown RBP5.52□□□□□ -1.53
SMG1-207ENST00000563235 KATNAL1Q9BW62 490 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 NUCKS1Q9H1E3 243 aaKnown RBP5.52□□□□□ -1.53
SMG1-207ENST00000563235 GPR52Q9Y2T5 361 aa5.52□□□□□ -1.53
SMG1-207ENST00000563235 EYA4O95677 639 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 LMNB2Q03252 620 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 RABL6Q3YEC7 729 aaPredicted RBP5.51□□□□□ -1.53
SMG1-207ENST00000563235 USPL1Q5W0Q7 1092 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 SLC6A19Q695T7 634 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 FAM47EQ6ZV65 393 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 NSUN6Q8TEA1 469 aaKnown RBP5.51□□□□□ -1.53
SMG1-207ENST00000563235 MFSD3Q96ES6 412 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 GTPBP4Q9BZE4 634 aaKnown RBP5.51□□□□□ -1.53
SMG1-207ENST00000563235 SLC13A1Q9BZW2 595 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 SLC12A5Q9H2X9 1139 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 ZFYVE28Q9HCC9 887 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 KIAA1586Q9HCI6 787 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 HERC5Q9UII4 1024 aaKnown RBP5.51□□□□□ -1.53
SMG1-207ENST00000563235 PLAAQ9Y263 795 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 LINC00854A0A1B0GVQ3 168 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 ZBTB7BO15156 539 aaPredicted RBP5.51□□□□□ -1.53
SMG1-207ENST00000563235 PDPK1O15530 556 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 PER1O15534 1290 aaPredicted RBP5.51□□□□□ -1.53
SMG1-207ENST00000563235 OATP04181 439 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 NPR3P17342 541 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 AKAP4Q5JQC9 854 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 SPNS2Q8IVW8 549 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 ABTB2Q8N961 1025 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 TEKT1Q969V4 418 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 GSDMAQ96QA5 445 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 DNAAF2Q9NVR5 837 aaKnown RBP5.51□□□□□ -1.53
SMG1-207ENST00000563235 C9IYK1 514 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 EYA2O00167 538 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 GABRDO14764 452 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 KRT10P13645 584 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 CD86P42081 329 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 SCNN1DP51172 638 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 MPP1Q00013 466 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 IFRD2Q12894 506 aaPredicted RBP5.51□□□□□ -1.53
SMG1-207ENST00000563235 MRPL28Q13084 256 aaKnown RBP5.51□□□□□ -1.53
SMG1-207ENST00000563235 PRKG2Q13237 762 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 SMC1AQ14683 1233 aaKnown RBP5.51□□□□□ -1.53
SMG1-207ENST00000563235 UTP14CQ5TAP6 766 aaKnown RBP5.51□□□□□ -1.53
SMG1-207ENST00000563235 VPS53Q5VIR6 699 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 TEX11Q8IYF3 940 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 VPS52Q8N1B4 723 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 ASIC4Q96FT7 647 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 FAM129BQ96TA1 746 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 CCDC113Q9H0I3 377 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 OSGEPQ9NPF4 335 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 NLRC4Q9NPP4 1024 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 KBTBD4Q9NVX7 518 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 ZMAT5Q9UDW3 170 aaKnown RBP5.51□□□□□ -1.53
SMG1-207ENST00000563235 ADAMTS1Q9UHI8 967 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 ZBTB21Q9ULJ3 1066 aa5.51□□□□□ -1.53
SMG1-207ENST00000563235 GRIN2AQ12879 1464 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 TNKSO95271 1327 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.5□□□□□ -1.53
SMG1-207ENST00000563235 LOC102724428A0A0B4J2F2 783 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 MMEP08473 750 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 CCDC172P0C7W6 258 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 ZNF853P0CG23 659 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 GJA5P36382 358 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 SIK1P57059 783 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 KRT83P78385 493 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 MMRN1Q13201 1228 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 ERMP1Q7Z2K6 904 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 ZBTB46Q86UZ6 589 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 DZIP1LQ8IYY4 767 aaKnown RBP5.5□□□□□ -1.53
SMG1-207ENST00000563235 AFAP1L1Q8TED9 768 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 NUP133Q8WUM0 1156 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 ANLNQ9NQW6 1124 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 VPS45Q9NRW7 570 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 WIZO95785 1651 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 SMAD7O15105 426 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms