RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 TTC22Q5TAA0 569 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 AK9Q5TCS8 1911 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 TATDN1Q6P1N9 297 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 GIMAP6Q6P9H5 292 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 TTC6Q86TZ1 520 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 SCYL3Q8IZE3 742 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 OPTNQ96CV9 577 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.43□□□□□ -1.22
CNOT1-204ENST00000563130 MCM9Q9NXL9 1143 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 SERPINB13Q9UIV8 391 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 SLC4A4Q9Y6R1 1079 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 GRXCR2A6NFK2 248 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 TRIM6-TRIM34B2RNG4 842 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 IRF6O14896 467 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 FOXP2O15409 715 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 GNAT2P19087 354 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 CAP2P40123 477 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 CCDC136Q96JN2 1154 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 HELLSQ9NRZ9 838 aa7.43□□□□□ -1.22
CNOT1-204ENST00000563130 MYH1P12882 1939 aa7.42□□□□□ -1.22
CNOT1-204ENST00000563130 A0A0D9SFI3 127 aa7.42□□□□□ -1.22
CNOT1-204ENST00000563130 MANSC4A6NHS7 340 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-204ENST00000563130 HSPA1AP0DMV8 641 aaKnown RBP7.42□□□□□ -1.22
CNOT1-204ENST00000563130 HSPA1BP0DMV9 641 aaKnown RBP7.42□□□□□ -1.22
CNOT1-204ENST00000563130 PTPRAP18433 802 aa7.42□□□□□ -1.22
CNOT1-204ENST00000563130 SDSP20132 328 aa7.42□□□□□ -1.22
CNOT1-204ENST00000563130 INHBEP58166 350 aa7.42□□□□□ -1.22
CNOT1-204ENST00000563130 PPIL2Q13356 520 aa7.42□□□□□ -1.22
CNOT1-204ENST00000563130 SBK1Q52WX2 424 aa7.42□□□□□ -1.22
CNOT1-204ENST00000563130 C12orf60Q5U649 245 aa7.42□□□□□ -1.22
CNOT1-204ENST00000563130 CTR9Q6PD62 1173 aa7.42□□□□□ -1.22
CNOT1-204ENST00000563130 RILPL2Q969X0 211 aa7.42□□□□□ -1.22
CNOT1-204ENST00000563130 FAM227BQ96M60 508 aa7.42□□□□□ -1.22
CNOT1-204ENST00000563130 EPB41L4AQ9HCS5 686 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-204ENST00000563130 KCNH4Q9UQ05 1017 aa7.42□□□□□ -1.22
CNOT1-204ENST00000563130 NAV1Q8NEY1 1877 aa7.42□□□□□ -1.22
CNOT1-204ENST00000563130 PATL2C9JE40 543 aaKnown RBP7.41□□□□□ -1.22
CNOT1-204ENST00000563130 USP17L12C9JPN9 530 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 USP17L21D6R901 530 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 SMIM22K7EJ46 135 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 POLR3DP05423 398 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-204ENST00000563130 CYP2D6P10635 497 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 SHMT1P34896 483 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 JAG1P78504 1218 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 SLC4A8Q2Y0W8 1093 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 CRACR2BQ8N4Y2 399 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-204ENST00000563130 PTPN18Q99952 460 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 GINM1Q9NU53 330 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 CA12O43570 354 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 SREBF2Q12772 1141 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 NMIQ13287 307 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-204ENST00000563130 MCMDC2Q4G0Z9 681 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 SMYD5Q6GMV2 418 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 CCDC129Q6ZRS4 1044 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 IFNL3Q8IZI9 196 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 CFHR5Q9BXR6 569 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 RNF186Q9NXI6 227 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 SAGE1Q9NXZ1 904 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 ARPP21Q9UBL0 812 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-204ENST00000563130 AFG3L2Q9Y4W6 797 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 ZHX2Q9Y6X8 837 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 DOCK1Q14185 1865 aa7.41□□□□□ -1.22
CNOT1-204ENST00000563130 CYP2D7A0A087X1C5 515 aa7.4□□□□□ -1.22
CNOT1-204ENST00000563130 IGF2BP3O00425 579 aaKnown RBP eCLIP7.4□□□□□ -1.22
CNOT1-204ENST00000563130 CXCL11O14625 94 aa7.4□□□□□ -1.22
CNOT1-204ENST00000563130 FOXN1O15353 648 aa7.4□□□□□ -1.22
CNOT1-204ENST00000563130 ASNSP08243 561 aa7.4□□□□□ -1.22
CNOT1-204ENST00000563130 GTF2A2P52657 109 aa7.4□□□□□ -1.22
CNOT1-204ENST00000563130 MOGSQ13724 837 aa7.4□□□□□ -1.22
CNOT1-204ENST00000563130 ZNF589Q86UQ0 364 aaPredicted RBP7.4□□□□□ -1.22
CNOT1-204ENST00000563130 SKAP1Q86WV1 359 aa7.4□□□□□ -1.22
CNOT1-204ENST00000563130 BRI3BPQ8WY22 251 aa7.4□□□□□ -1.22
CNOT1-204ENST00000563130 DDRGK1Q96HY6 314 aa7.4□□□□□ -1.22
CNOT1-204ENST00000563130 PICK1Q9NRD5 415 aa7.4□□□□□ -1.22
CNOT1-204ENST00000563130 PPP4R2Q9NY27 417 aa7.4□□□□□ -1.22
CNOT1-204ENST00000563130 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.4□□□□□ -1.22
CNOT1-204ENST00000563130 SWAP70Q9UH65 585 aa7.4□□□□□ -1.22
CNOT1-204ENST00000563130 BAZ2AQ9UIF9 1905 aaKnown RBP7.4□□□□□ -1.22
CNOT1-204ENST00000563130 ROBO3Q96MS0 1386 aa7.4□□□□□ -1.22
CNOT1-204ENST00000563130 HIP1O00291 1037 aa7.4□□□□□ -1.23
CNOT1-204ENST00000563130 ARHGAP33O14559 1287 aa7.4□□□□□ -1.23
CNOT1-204ENST00000563130 MLLT3P42568 568 aaPredicted RBP7.4□□□□□ -1.23
CNOT1-204ENST00000563130 SNAPC2Q13487 334 aa7.4□□□□□ -1.23
CNOT1-204ENST00000563130 SHROOM1Q2M3G4 852 aaPredicted RBP7.4□□□□□ -1.23
CNOT1-204ENST00000563130 VPS53Q5VIR6 699 aa7.4□□□□□ -1.23
CNOT1-204ENST00000563130 C16orf86Q6ZW13 317 aa7.4□□□□□ -1.23
CNOT1-204ENST00000563130 DYNLL2Q96FJ2 89 aa7.4□□□□□ -1.23
CNOT1-204ENST00000563130 BEGAINQ9BUH8 593 aa7.4□□□□□ -1.23
CNOT1-204ENST00000563130 TBC1D2Q9BYX2 928 aa7.4□□□□□ -1.23
CNOT1-204ENST00000563130 ADAM33Q9BZ11 813 aa7.4□□□□□ -1.23
CNOT1-204ENST00000563130 ZBTB21Q9ULJ3 1066 aa7.4□□□□□ -1.23
CNOT1-204ENST00000563130 PHIPQ8WWQ0 1821 aa7.4□□□□□ -1.23
CNOT1-204ENST00000563130 CCDC171Q6TFL3 1326 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 CCL15-CCL14A0A0B4J2E2 113 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 A0A0G2JLL6 359 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-204ENST00000563130 USP17L5A8MUK1 530 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 GDF11O95390 407 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 ALDH1A1P00352 501 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 HSPD1P10809 573 aaKnown RBP7.39□□□□□ -1.23
CNOT1-204ENST00000563130 CETPP11597 493 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms