RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 SBK1Q52WX2 424 aa23.16■■□□□ 1.3
TMEM249-202ENST00000562477 USP17L2Q6R6M4 530 aa23.16■■□□□ 1.3
TMEM249-202ENST00000562477 RILPL2Q969X0 211 aa23.16■■□□□ 1.3
TMEM249-202ENST00000562477 FAM227BQ96M60 508 aa23.16■■□□□ 1.3
TMEM249-202ENST00000562477 OSBPL3Q9H4L5 887 aa23.16■■□□□ 1.3
TMEM249-202ENST00000562477 A0A0D9SFI3 127 aa23.15■■□□□ 1.3
TMEM249-202ENST00000562477 A0A1W2PRG0 241 aa23.15■■□□□ 1.3
TMEM249-202ENST00000562477 FOXP2O15409 715 aa23.15■■□□□ 1.3
TMEM249-202ENST00000562477 PSMC4P43686 418 aa23.15■■□□□ 1.3
TMEM249-202ENST00000562477 KIF22Q14807 665 aa23.15■■□□□ 1.3
TMEM249-202ENST00000562477 IFNL3Q8IZI9 196 aa23.15■■□□□ 1.3
TMEM249-202ENST00000562477 TRIM47Q96LD4 638 aa23.15■■□□□ 1.3
TMEM249-202ENST00000562477 PNMA3Q9UL41 463 aa23.15■■□□□ 1.3
TMEM249-202ENST00000562477 CENPFP49454 3210 aa23.14■■□□□ 1.3
TMEM249-202ENST00000562477 TMEM179Q6ZVK1 233 aa23.14■■□□□ 1.29
TMEM249-202ENST00000562477 ANKRD13CQ8N6S4 541 aa23.14■■□□□ 1.29
TMEM249-202ENST00000562477 PEX10O60683 326 aa23.13■■□□□ 1.29
TMEM249-202ENST00000562477 OSBPP22059 807 aa23.13■■□□□ 1.29
TMEM249-202ENST00000562477 IRX3P78415 501 aaPredicted RBP23.13■■□□□ 1.29
TMEM249-202ENST00000562477 NMIQ13287 307 aaPredicted RBP23.13■■□□□ 1.29
TMEM249-202ENST00000562477 PABPC4Q13310 644 aaKnown RBP eCLIP23.13■■□□□ 1.29
TMEM249-202ENST00000562477 VPS53Q5VIR6 699 aa23.13■■□□□ 1.29
TMEM249-202ENST00000562477 SIAH1Q8IUQ4 282 aa23.13■■□□□ 1.29
TMEM249-202ENST00000562477 P2RX7Q99572 595 aaKnown RBP23.13■■□□□ 1.29
TMEM249-202ENST00000562477 KIAA1683Q9H0B3 1180 aa23.13■■□□□ 1.29
TMEM249-202ENST00000562477 TAOK2Q9UL54 1235 aa23.13■■□□□ 1.29
TMEM249-202ENST00000562477 PTCH2Q9Y6C5 1203 aa23.13■■□□□ 1.29
TMEM249-202ENST00000562477 HOXA7P31268 230 aaPredicted RBP23.12■■□□□ 1.29
TMEM249-202ENST00000562477 C12orf42Q96LP6 360 aa23.12■■□□□ 1.29
TMEM249-202ENST00000562477 ROBO3Q96MS0 1386 aa23.12■■□□□ 1.29
TMEM249-202ENST00000562477 FMNL1O95466 1100 aaPredicted RBP23.11■■□□□ 1.29
TMEM249-202ENST00000562477 RASA1P20936 1047 aa23.11■■□□□ 1.29
TMEM249-202ENST00000562477 SOX10P56693 466 aa23.11■■□□□ 1.29
TMEM249-202ENST00000562477 ARHGEF6Q15052 776 aa23.11■■□□□ 1.29
TMEM249-202ENST00000562477 KIAA1755Q5JYT7 1200 aa23.11■■□□□ 1.29
TMEM249-202ENST00000562477 CCDC17Q96LX7 622 aa23.11■■□□□ 1.29
TMEM249-202ENST00000562477 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.11■■□□□ 1.29
TMEM249-202ENST00000562477 NACAP1Q9BZK3 213 aa23.11■■□□□ 1.29
TMEM249-202ENST00000562477 HELLSQ9NRZ9 838 aa23.11■■□□□ 1.29
TMEM249-202ENST00000562477 MYH8P13535 1937 aa23.1■■□□□ 1.29
TMEM249-202ENST00000562477 PRDM1O75626 825 aa23.1■■□□□ 1.29
TMEM249-202ENST00000562477 VCAM1P19320 739 aa23.1■■□□□ 1.29
TMEM249-202ENST00000562477 USP14P54578 494 aa23.1■■□□□ 1.29
TMEM249-202ENST00000562477 ICA1Q05084 483 aa23.1■■□□□ 1.29
TMEM249-202ENST00000562477 POTEEQ6S8J3 1075 aa23.1■■□□□ 1.29
TMEM249-202ENST00000562477 ZNF589Q86UQ0 364 aaPredicted RBP23.1■■□□□ 1.29
TMEM249-202ENST00000562477 NAPBQ9H115 298 aa23.1■■□□□ 1.29
TMEM249-202ENST00000562477 SDSP20132 328 aa23.09■■□□□ 1.29
TMEM249-202ENST00000562477 HERVK_113P62684 666 aa23.09■■□□□ 1.29
TMEM249-202ENST00000562477 FAM110CQ1W6H9 321 aa23.09■■□□□ 1.29
TMEM249-202ENST00000562477 MKNK2Q9HBH9 465 aa23.09■■□□□ 1.29
TMEM249-202ENST00000562477 TXNRD2Q9NNW7 524 aa23.09■■□□□ 1.29
TMEM249-202ENST00000562477 SRRDQ9UH36 339 aa23.09■■□□□ 1.29
TMEM249-202ENST00000562477 GCLCP48506 637 aaPredicted RBP23.08■■□□□ 1.29
TMEM249-202ENST00000562477 FCGRTP55899 365 aa23.08■■□□□ 1.29
TMEM249-202ENST00000562477 MCMDC2Q4G0Z9 681 aa23.08■■□□□ 1.29
TMEM249-202ENST00000562477 USP17L15C9J2P7 530 aa23.07■■□□□ 1.28
TMEM249-202ENST00000562477 USP17L13C9JLJ4 530 aa23.07■■□□□ 1.28
TMEM249-202ENST00000562477 USP17L11C9JVI0 530 aa23.07■■□□□ 1.28
TMEM249-202ENST00000562477 USP17L18D6R9N7 530 aa23.07■■□□□ 1.28
TMEM249-202ENST00000562477 USP17L22D6RA61 530 aa23.07■■□□□ 1.28
TMEM249-202ENST00000562477 USP17L17D6RBQ6 530 aa23.07■■□□□ 1.28
TMEM249-202ENST00000562477 USP17L19D6RCP7 530 aa23.07■■□□□ 1.28
TMEM249-202ENST00000562477 USP17L20D6RJB6 530 aa23.07■■□□□ 1.28
TMEM249-202ENST00000562477 GSPT1P15170 499 aaKnown RBP23.07■■□□□ 1.28
TMEM249-202ENST00000562477 ATP2B2Q01814 1243 aa23.07■■□□□ 1.28
TMEM249-202ENST00000562477 PPARAQ07869 468 aa23.07■■□□□ 1.28
TMEM249-202ENST00000562477 USP17L24Q0WX57 530 aa23.07■■□□□ 1.28
TMEM249-202ENST00000562477 RPAP3Q9H6T3 665 aaPredicted RBP23.07■■□□□ 1.28
TMEM249-202ENST00000562477 GABRQQ9UN88 632 aa23.07■■□□□ 1.28
TMEM249-202ENST00000562477 KIAA0100Q14667 2235 aaKnown RBP23.06■■□□□ 1.28
TMEM249-202ENST00000562477 GNRH1P01148 92 aa23.06■■□□□ 1.28
TMEM249-202ENST00000562477 EEF2P13639 858 aaKnown RBP23.06■■□□□ 1.28
TMEM249-202ENST00000562477 PRKCZQ05513 592 aa23.06■■□□□ 1.28
TMEM249-202ENST00000562477 CTDSPL2Q05D32 466 aa23.06■■□□□ 1.28
TMEM249-202ENST00000562477 CATSPERGQ6ZRH7 1159 aa23.06■■□□□ 1.28
TMEM249-202ENST00000562477 ARHGEF10LQ9HCE6 1279 aa23.06■■□□□ 1.28
TMEM249-202ENST00000562477 INCENPQ9NQS7 918 aa23.06■■□□□ 1.28
TMEM249-202ENST00000562477 TACC3Q9Y6A5 838 aa23.06■■□□□ 1.28
TMEM249-202ENST00000562477 MYPNQ86TC9 1320 aa23.06■■□□□ 1.28
TMEM249-202ENST00000562477 DOCK3Q8IZD9 2030 aa23.05■■□□□ 1.28
TMEM249-202ENST00000562477 TTC22Q5TAA0 569 aa23.05■■□□□ 1.28
TMEM249-202ENST00000562477 TICAM2Q86XR7 235 aa23.05■■□□□ 1.28
TMEM249-202ENST00000562477 SPICE1Q8N0Z3 855 aa23.05■■□□□ 1.28
TMEM249-202ENST00000562477 SH3TC2Q8TF17 1288 aa23.05■■□□□ 1.28
TMEM249-202ENST00000562477 ARMC5Q96C12 935 aa23.05■■□□□ 1.28
TMEM249-202ENST00000562477 PAGR1Q9BTK6 254 aa23.05■■□□□ 1.28
TMEM249-202ENST00000562477 KANSL2Q9H9L4 492 aa23.05■■□□□ 1.28
TMEM249-202ENST00000562477 RBPJLQ9UBG7 517 aa23.05■■□□□ 1.28
TMEM249-202ENST00000562477 MORF4L1Q9UBU8 362 aa23.05■■□□□ 1.28
TMEM249-202ENST00000562477 TMX2Q9Y320 296 aa23.05■■□□□ 1.28
TMEM249-202ENST00000562477 TNPO2O14787 897 aaKnown RBP23.04■■□□□ 1.28
TMEM249-202ENST00000562477 HOXD10P28358 340 aa23.04■■□□□ 1.28
TMEM249-202ENST00000562477 SLC9C1Q4G0N8 1177 aa23.04■■□□□ 1.28
TMEM249-202ENST00000562477 CCDC171Q6TFL3 1326 aa23.04■■□□□ 1.28
TMEM249-202ENST00000562477 MGAMO43451 1857 aa23.03■■□□□ 1.28
TMEM249-202ENST00000562477 CNMDO75829 334 aa23.03■■□□□ 1.28
TMEM249-202ENST00000562477 HSPD1P10809 573 aaKnown RBP23.03■■□□□ 1.28
TMEM249-202ENST00000562477 PRMT2P55345 433 aa23.03■■□□□ 1.28
TMEM249-202ENST00000562477 ALX1Q15699 326 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms