RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 MYPNQ86TC9 1320 aa13.35□□□□□ -0.27
LPCAT4-202ENST00000562404 GPAA1O43292 621 aa13.34□□□□□ -0.27
LPCAT4-202ENST00000562404 GLRX3O76003 335 aaKnown RBP13.34□□□□□ -0.27
LPCAT4-202ENST00000562404 GNRH1P01148 92 aa13.34□□□□□ -0.27
LPCAT4-202ENST00000562404 CDK8P49336 464 aa13.34□□□□□ -0.27
LPCAT4-202ENST00000562404 PDE1AP54750 535 aa13.34□□□□□ -0.27
LPCAT4-202ENST00000562404 FCGRTP55899 365 aa13.34□□□□□ -0.27
LPCAT4-202ENST00000562404 ARHGEF6Q15052 776 aa13.34□□□□□ -0.27
LPCAT4-202ENST00000562404 FAM110CQ1W6H9 321 aa13.34□□□□□ -0.27
LPCAT4-202ENST00000562404 SLC9C1Q4G0N8 1177 aa13.34□□□□□ -0.27
LPCAT4-202ENST00000562404 KIAA1755Q5JYT7 1200 aa13.34□□□□□ -0.27
LPCAT4-202ENST00000562404 C12orf42Q96LP6 360 aa13.34□□□□□ -0.27
LPCAT4-202ENST00000562404 LNPKQ9C0E8 428 aa13.34□□□□□ -0.27
LPCAT4-202ENST00000562404 TMOD4Q9NZQ9 345 aa13.34□□□□□ -0.27
LPCAT4-202ENST00000562404 STAP2Q9UGK3 403 aa13.34□□□□□ -0.27
LPCAT4-202ENST00000562404 PNMA3Q9UL41 463 aa13.34□□□□□ -0.27
LPCAT4-202ENST00000562404 MPHOSPH10O00566 681 aaKnown RBP13.33□□□□□ -0.28
LPCAT4-202ENST00000562404 ERC2O15083 957 aa13.33□□□□□ -0.28
LPCAT4-202ENST00000562404 EN2P19622 333 aaPredicted RBP13.33□□□□□ -0.28
LPCAT4-202ENST00000562404 HERVK_113P62684 666 aa13.33□□□□□ -0.28
LPCAT4-202ENST00000562404 IRX6P78412 446 aaPredicted RBP13.33□□□□□ -0.28
LPCAT4-202ENST00000562404 MTFR1Q15390 333 aa13.33□□□□□ -0.28
LPCAT4-202ENST00000562404 Q3C1V9 767 aa13.33□□□□□ -0.28
LPCAT4-202ENST00000562404 B4GALNT3Q6L9W6 998 aa13.33□□□□□ -0.28
LPCAT4-202ENST00000562404 USP17L2Q6R6M4 530 aa13.33□□□□□ -0.28
LPCAT4-202ENST00000562404 C16orf86Q6ZW13 317 aa13.33□□□□□ -0.28
LPCAT4-202ENST00000562404 STK11IPQ8N1F8 1099 aa13.33□□□□□ -0.28
LPCAT4-202ENST00000562404 KIAA1683Q9H0B3 1180 aa13.33□□□□□ -0.28
LPCAT4-202ENST00000562404 CABP5Q9NP86 173 aa13.33□□□□□ -0.28
LPCAT4-202ENST00000562404 RBPJLQ9UBG7 517 aa13.33□□□□□ -0.28
LPCAT4-202ENST00000562404 SWAP70Q9UH65 585 aa13.33□□□□□ -0.28
LPCAT4-202ENST00000562404 MYH4Q9Y623 1939 aa13.33□□□□□ -0.28
LPCAT4-202ENST00000562404 COL11A1P12107 1806 aaPredicted RBP13.32□□□□□ -0.28
LPCAT4-202ENST00000562404 FOXP2O15409 715 aa13.32□□□□□ -0.28
LPCAT4-202ENST00000562404 ZFYP08048 801 aaPredicted RBP13.32□□□□□ -0.28
LPCAT4-202ENST00000562404 VCAM1P19320 739 aa13.32□□□□□ -0.28
LPCAT4-202ENST00000562404 GCLCP48506 637 aaPredicted RBP13.32□□□□□ -0.28
LPCAT4-202ENST00000562404 FLT3LGP49771 235 aa13.32□□□□□ -0.28
LPCAT4-202ENST00000562404 PRMT2P55345 433 aa13.32□□□□□ -0.28
LPCAT4-202ENST00000562404 IRX3P78415 501 aaPredicted RBP13.32□□□□□ -0.28
LPCAT4-202ENST00000562404 PABPC4Q13310 644 aaKnown RBP eCLIP13.32□□□□□ -0.28
LPCAT4-202ENST00000562404 ZMYM1Q5SVZ6 1142 aa13.32□□□□□ -0.28
LPCAT4-202ENST00000562404 CCDC129Q6ZRS4 1044 aa13.32□□□□□ -0.28
LPCAT4-202ENST00000562404 FEZ1Q99689 392 aa13.32□□□□□ -0.28
LPCAT4-202ENST00000562404 FSD1Q9BTV5 496 aa13.32□□□□□ -0.28
LPCAT4-202ENST00000562404 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.32□□□□□ -0.28
LPCAT4-202ENST00000562404 MORF4L1Q9UBU8 362 aa13.32□□□□□ -0.28
LPCAT4-202ENST00000562404 A0A0G2JMZ2 1700 aa13.31□□□□□ -0.28
LPCAT4-202ENST00000562404 TNPO2O14787 897 aaKnown RBP13.31□□□□□ -0.28
LPCAT4-202ENST00000562404 CNMDO75829 334 aa13.31□□□□□ -0.28
LPCAT4-202ENST00000562404 ELNP15502 786 aa13.31□□□□□ -0.28
LPCAT4-202ENST00000562404 GRK4P32298 578 aa13.31□□□□□ -0.28
LPCAT4-202ENST00000562404 AAMPQ13685 434 aa13.31□□□□□ -0.28
LPCAT4-202ENST00000562404 SBK1Q52WX2 424 aa13.31□□□□□ -0.28
LPCAT4-202ENST00000562404 CATSPERGQ6ZRH7 1159 aa13.31□□□□□ -0.28
LPCAT4-202ENST00000562404 TMEM179Q6ZVK1 233 aa13.31□□□□□ -0.28
LPCAT4-202ENST00000562404 RAET1EQ8TD07 263 aa13.31□□□□□ -0.28
LPCAT4-202ENST00000562404 ARPP21Q9UBL0 812 aaPredicted RBP13.31□□□□□ -0.28
LPCAT4-202ENST00000562404 GJD2Q9UKL4 321 aa13.31□□□□□ -0.28
LPCAT4-202ENST00000562404 MINDY4BA8MYZ0 360 aa13.3□□□□□ -0.28
LPCAT4-202ENST00000562404 HOXD10P28358 340 aa13.3□□□□□ -0.28
LPCAT4-202ENST00000562404 GIMAP6Q6P9H5 292 aa13.3□□□□□ -0.28
LPCAT4-202ENST00000562404 NBPF11Q86T75 865 aa13.3□□□□□ -0.28
LPCAT4-202ENST00000562404 IFNL3Q8IZI9 196 aa13.3□□□□□ -0.28
LPCAT4-202ENST00000562404 PAGR1Q9BTK6 254 aa13.3□□□□□ -0.28
LPCAT4-202ENST00000562404 PORCNQ9H237 461 aa13.3□□□□□ -0.28
LPCAT4-202ENST00000562404 RWDD1Q9H446 243 aaPredicted RBP13.3□□□□□ -0.28
LPCAT4-202ENST00000562404 RPAP3Q9H6T3 665 aaPredicted RBP13.3□□□□□ -0.28
LPCAT4-202ENST00000562404 ROBO3Q96MS0 1386 aa13.3□□□□□ -0.28
LPCAT4-202ENST00000562404 USP17L15C9J2P7 530 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 PATL2C9JE40 543 aaKnown RBP13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 USP17L13C9JLJ4 530 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 USP17L11C9JVI0 530 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 USP17L18D6R9N7 530 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 USP17L22D6RA61 530 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 USP17L17D6RBQ6 530 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 USP17L19D6RCP7 530 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 USP17L20D6RJB6 530 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 ADCY3O60266 1144 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 RASA1P20936 1047 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 USP14P54578 494 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 ERVK-9P63128 1117 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 ERVK-24P63145 666 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 NUCB1Q02818 461 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 USP17L24Q0WX57 530 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 VPS53Q5VIR6 699 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 PLEKHM2Q8IWE5 1019 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 BTBD7Q9P203 1132 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 TACC3Q9Y6A5 838 aa13.29□□□□□ -0.28
LPCAT4-202ENST00000562404 SPDYE16A6NNV3 312 aaPredicted RBP13.28□□□□□ -0.28
LPCAT4-202ENST00000562404 PRDM1O75626 825 aa13.28□□□□□ -0.28
LPCAT4-202ENST00000562404 EEF2P13639 858 aaKnown RBP13.28□□□□□ -0.28
LPCAT4-202ENST00000562404 ICA1Q05084 483 aa13.28□□□□□ -0.28
LPCAT4-202ENST00000562404 IRF5Q13568 498 aa13.28□□□□□ -0.28
LPCAT4-202ENST00000562404 CHD1LQ86WJ1 897 aa13.28□□□□□ -0.28
LPCAT4-202ENST00000562404 SPICE1Q8N0Z3 855 aa13.28□□□□□ -0.28
LPCAT4-202ENST00000562404 EVI5LQ96CN4 794 aa13.28□□□□□ -0.28
LPCAT4-202ENST00000562404 SHISA4Q96DD7 197 aa13.28□□□□□ -0.28
LPCAT4-202ENST00000562404 DDRGK1Q96HY6 314 aa13.28□□□□□ -0.28
LPCAT4-202ENST00000562404 CCDC17Q96LX7 622 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms